Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475359

Identifier: 113475359

GI number: 113475359

Start: 2552960

End: 2554372

Strand: Reverse

Name: 113475359

Synonym: Tery_1676

Alternate gene names: NA

Gene position: 2554372-2552960 (Counterclockwise)

Preceding gene: 113475360

Following gene: 113475357

Centisome position: 32.96

GC content: 27.74

Gene sequence:

>1413_bases
ATGAAAAAATTGAGTTTTTTGAAAAATACCTCAGAACTATGGAAAATTGTTTTGATGAATATAATTTTCTTATTTGTATT
TTTAGAGTTAGGTTCTTTAGGTTGGTATTTTTTCAAATATAAGCAATTTTTCTATACTAGAGAAAAAGTAACAGAAAACA
ATCAAGAAGAAAAACTAGAAAATGAAAATGAAAATAAAAATGCTAATGTCAATACAAATCCCATGGGAATAAACTTAGCA
GGAATTAGGTTAGAAAGTTCTGTAATAGAAAGAATTCATCCTTACTTTGGGTATGTACAAAAACCTGGACCAGATTTTAG
AGAAGATTTTAAATATAATGATGCTGGTTTTATTTCTCCTTATGATTACCCTTATAAAAAGAAGAATAATAATCAATATA
TAATCGGAATTTTTGGTGGTTCAGTTGCCTCAAACTATTCAATATATGAAATTAAGAATCAAATCTTAGAAAAGAAATTA
AAGCAACTTCCAGAATTTCGGGACAAGGAATTTATTATCTTATCTTTAGCAATAGGAGGCTATAAACAACCACAACAATT
AATACTATTAAACTACTTTCTTTCCATAGGTCAGAAATTTGATATGATCATAAATATAGATGGTTTTAACGAGGTAACTA
TAGCTAAGTCAAACAACGAAAATGCTGTTAATATTATGATGCCAAGTACTAACCATGTTGTACCATTAACGAATATAGCA
AATAATAGTCTCTCCACAAAATCTATTCAAGCTATGTTAAAAATTAACGATAGTAAGAATAAGTTAAAGGGTACCTTAGA
AACTTTAGATAAATGTCAAGTAGCTTATTGTTATGCCCTAACATCAATTTATGTGCAAAATTTAGCAAAAAAGTATCGTA
AAAATGTCAAAATATTTGATAAAGAAAGAAAAAAAGCAGCGTCACAAGCTGCTGGAGAAACAGAAGCTAGTATAGTTTAT
TTTTATGCACAGTCTCCTGAATTAAAAGAATCAGAGTTATATGATACAATGGCAGAACACTGGCAAAAAACATCAATAAT
GATGGAGCAAATAGCTGCAAGTAATAATATTTTATATTTTCATGTTTTACAACCTAATCAATATTATTTTACTAACCGAG
TTTTTTCTGAAACAGAAAAGAAAATTGCTTTTGACTCTGATAGTCCTTTTAGAGAAGCAACAGAATTAGGATATCCTGTA
CTTTTAAGTAAAACAGACAATTTAAAACAAAATGGTGTGAATTTTTTCAATGGTGTGAAAATTTTAGATAATGCCAAAGA
AATCGTTTATATAGATAGTTGTTGCCATTATACTGAAGCTGGAGAAAATATTTTGTCAGATTTTATAGCCAATTCAATTT
TTACTACACTTACTGCCAATGAAAATCAATTAGGAGATAGTAAAAATGAATAA

Upstream 100 bases:

>100_bases
GTATGACTCTTATTATCAAAATAATATAAATCCAAAATATCCAGTATTTATGCTGGAGTAAAACTGAAAAAATATATAAA
TTATTTGCTATAAAATTGCC

Downstream 100 bases:

>100_bases
AATAATCTACTGAAAACTAGGGAAATTTTTTCCCAGAGAGATACTTATATATTACTTCTGCAGCTAATTTATTACCAGCA
ATATTCCAATGAATATCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKKLSFLKNTSELWKIVLMNIIFLFVFLELGSLGWYFFKYKQFFYTREKVTENNQEEKLENENENKNANVNTNPMGINLA
GIRLESSVIERIHPYFGYVQKPGPDFREDFKYNDAGFISPYDYPYKKKNNNQYIIGIFGGSVASNYSIYEIKNQILEKKL
KQLPEFRDKEFIILSLAIGGYKQPQQLILLNYFLSIGQKFDMIINIDGFNEVTIAKSNNENAVNIMMPSTNHVVPLTNIA
NNSLSTKSIQAMLKINDSKNKLKGTLETLDKCQVAYCYALTSIYVQNLAKKYRKNVKIFDKERKKAASQAAGETEASIVY
FYAQSPELKESELYDTMAEHWQKTSIMMEQIAASNNILYFHVLQPNQYYFTNRVFSETEKKIAFDSDSPFREATELGYPV
LLSKTDNLKQNGVNFFNGVKILDNAKEIVYIDSCCHYTEAGENILSDFIANSIFTTLTANENQLGDSKNE

Sequences:

>Translated_470_residues
MKKLSFLKNTSELWKIVLMNIIFLFVFLELGSLGWYFFKYKQFFYTREKVTENNQEEKLENENENKNANVNTNPMGINLA
GIRLESSVIERIHPYFGYVQKPGPDFREDFKYNDAGFISPYDYPYKKKNNNQYIIGIFGGSVASNYSIYEIKNQILEKKL
KQLPEFRDKEFIILSLAIGGYKQPQQLILLNYFLSIGQKFDMIINIDGFNEVTIAKSNNENAVNIMMPSTNHVVPLTNIA
NNSLSTKSIQAMLKINDSKNKLKGTLETLDKCQVAYCYALTSIYVQNLAKKYRKNVKIFDKERKKAASQAAGETEASIVY
FYAQSPELKESELYDTMAEHWQKTSIMMEQIAASNNILYFHVLQPNQYYFTNRVFSETEKKIAFDSDSPFREATELGYPV
LLSKTDNLKQNGVNFFNGVKILDNAKEIVYIDSCCHYTEAGENILSDFIANSIFTTLTANENQLGDSKNE
>Mature_470_residues
MKKLSFLKNTSELWKIVLMNIIFLFVFLELGSLGWYFFKYKQFFYTREKVTENNQEEKLENENENKNANVNTNPMGINLA
GIRLESSVIERIHPYFGYVQKPGPDFREDFKYNDAGFISPYDYPYKKKNNNQYIIGIFGGSVASNYSIYEIKNQILEKKL
KQLPEFRDKEFIILSLAIGGYKQPQQLILLNYFLSIGQKFDMIINIDGFNEVTIAKSNNENAVNIMMPSTNHVVPLTNIA
NNSLSTKSIQAMLKINDSKNKLKGTLETLDKCQVAYCYALTSIYVQNLAKKYRKNVKIFDKERKKAASQAAGETEASIVY
FYAQSPELKESELYDTMAEHWQKTSIMMEQIAASNNILYFHVLQPNQYYFTNRVFSETEKKIAFDSDSPFREATELGYPV
LLSKTDNLKQNGVNFFNGVKILDNAKEIVYIDSCCHYTEAGENILSDFIANSIFTTLTANENQLGDSKNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54102; Mature: 54102

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSFLKNTSELWKIVLMNIIFLFVFLELGSLGWYFFKYKQFFYTREKVTENNQEEKLE
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHC
NENENKNANVNTNPMGINLAGIRLESSVIERIHPYFGYVQKPGPDFREDFKYNDAGFISP
CCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCC
YDYPYKKKNNNQYIIGIFGGSVASNYSIYEIKNQILEKKLKQLPEFRDKEFIILSLAIGG
CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
YKQPQQLILLNYFLSIGQKFDMIINIDGFNEVTIAKSNNENAVNIMMPSTNHVVPLTNIA
CCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECCCC
NNSLSTKSIQAMLKINDSKNKLKGTLETLDKCQVAYCYALTSIYVQNLAKKYRKNVKIFD
CCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC
KERKKAASQAAGETEASIVYFYAQSPELKESELYDTMAEHWQKTSIMMEQIAASNNILYF
HHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
HVLQPNQYYFTNRVFSETEKKIAFDSDSPFREATELGYPVLLSKTDNLKQNGVNFFNGVK
EEECCCCEEEHHHHHHHHHHHEEECCCCCHHHHHHCCCCEEEECCCCCHHCCCCHHCCEE
ILDNAKEIVYIDSCCHYTEAGENILSDFIANSIFTTLTANENQLGDSKNE
EECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKKLSFLKNTSELWKIVLMNIIFLFVFLELGSLGWYFFKYKQFFYTREKVTENNQEEKLE
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHC
NENENKNANVNTNPMGINLAGIRLESSVIERIHPYFGYVQKPGPDFREDFKYNDAGFISP
CCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCC
YDYPYKKKNNNQYIIGIFGGSVASNYSIYEIKNQILEKKLKQLPEFRDKEFIILSLAIGG
CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
YKQPQQLILLNYFLSIGQKFDMIINIDGFNEVTIAKSNNENAVNIMMPSTNHVVPLTNIA
CCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECCCC
NNSLSTKSIQAMLKINDSKNKLKGTLETLDKCQVAYCYALTSIYVQNLAKKYRKNVKIFD
CCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC
KERKKAASQAAGETEASIVYFYAQSPELKESELYDTMAEHWQKTSIMMEQIAASNNILYF
HHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
HVLQPNQYYFTNRVFSETEKKIAFDSDSPFREATELGYPVLLSKTDNLKQNGVNFFNGVK
EEECCCCEEEHHHHHHHHHHHEEECCCCCHHHHHHCCCCEEEECCCCCHHCCCCHHCCEE
ILDNAKEIVYIDSCCHYTEAGENILSDFIANSIFTTLTANENQLGDSKNE
EECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA