| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475359
Identifier: 113475359
GI number: 113475359
Start: 2552960
End: 2554372
Strand: Reverse
Name: 113475359
Synonym: Tery_1676
Alternate gene names: NA
Gene position: 2554372-2552960 (Counterclockwise)
Preceding gene: 113475360
Following gene: 113475357
Centisome position: 32.96
GC content: 27.74
Gene sequence:
>1413_bases ATGAAAAAATTGAGTTTTTTGAAAAATACCTCAGAACTATGGAAAATTGTTTTGATGAATATAATTTTCTTATTTGTATT TTTAGAGTTAGGTTCTTTAGGTTGGTATTTTTTCAAATATAAGCAATTTTTCTATACTAGAGAAAAAGTAACAGAAAACA ATCAAGAAGAAAAACTAGAAAATGAAAATGAAAATAAAAATGCTAATGTCAATACAAATCCCATGGGAATAAACTTAGCA GGAATTAGGTTAGAAAGTTCTGTAATAGAAAGAATTCATCCTTACTTTGGGTATGTACAAAAACCTGGACCAGATTTTAG AGAAGATTTTAAATATAATGATGCTGGTTTTATTTCTCCTTATGATTACCCTTATAAAAAGAAGAATAATAATCAATATA TAATCGGAATTTTTGGTGGTTCAGTTGCCTCAAACTATTCAATATATGAAATTAAGAATCAAATCTTAGAAAAGAAATTA AAGCAACTTCCAGAATTTCGGGACAAGGAATTTATTATCTTATCTTTAGCAATAGGAGGCTATAAACAACCACAACAATT AATACTATTAAACTACTTTCTTTCCATAGGTCAGAAATTTGATATGATCATAAATATAGATGGTTTTAACGAGGTAACTA TAGCTAAGTCAAACAACGAAAATGCTGTTAATATTATGATGCCAAGTACTAACCATGTTGTACCATTAACGAATATAGCA AATAATAGTCTCTCCACAAAATCTATTCAAGCTATGTTAAAAATTAACGATAGTAAGAATAAGTTAAAGGGTACCTTAGA AACTTTAGATAAATGTCAAGTAGCTTATTGTTATGCCCTAACATCAATTTATGTGCAAAATTTAGCAAAAAAGTATCGTA AAAATGTCAAAATATTTGATAAAGAAAGAAAAAAAGCAGCGTCACAAGCTGCTGGAGAAACAGAAGCTAGTATAGTTTAT TTTTATGCACAGTCTCCTGAATTAAAAGAATCAGAGTTATATGATACAATGGCAGAACACTGGCAAAAAACATCAATAAT GATGGAGCAAATAGCTGCAAGTAATAATATTTTATATTTTCATGTTTTACAACCTAATCAATATTATTTTACTAACCGAG TTTTTTCTGAAACAGAAAAGAAAATTGCTTTTGACTCTGATAGTCCTTTTAGAGAAGCAACAGAATTAGGATATCCTGTA CTTTTAAGTAAAACAGACAATTTAAAACAAAATGGTGTGAATTTTTTCAATGGTGTGAAAATTTTAGATAATGCCAAAGA AATCGTTTATATAGATAGTTGTTGCCATTATACTGAAGCTGGAGAAAATATTTTGTCAGATTTTATAGCCAATTCAATTT TTACTACACTTACTGCCAATGAAAATCAATTAGGAGATAGTAAAAATGAATAA
Upstream 100 bases:
>100_bases GTATGACTCTTATTATCAAAATAATATAAATCCAAAATATCCAGTATTTATGCTGGAGTAAAACTGAAAAAATATATAAA TTATTTGCTATAAAATTGCC
Downstream 100 bases:
>100_bases AATAATCTACTGAAAACTAGGGAAATTTTTTCCCAGAGAGATACTTATATATTACTTCTGCAGCTAATTTATTACCAGCA ATATTCCAATGAATATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MKKLSFLKNTSELWKIVLMNIIFLFVFLELGSLGWYFFKYKQFFYTREKVTENNQEEKLENENENKNANVNTNPMGINLA GIRLESSVIERIHPYFGYVQKPGPDFREDFKYNDAGFISPYDYPYKKKNNNQYIIGIFGGSVASNYSIYEIKNQILEKKL KQLPEFRDKEFIILSLAIGGYKQPQQLILLNYFLSIGQKFDMIINIDGFNEVTIAKSNNENAVNIMMPSTNHVVPLTNIA NNSLSTKSIQAMLKINDSKNKLKGTLETLDKCQVAYCYALTSIYVQNLAKKYRKNVKIFDKERKKAASQAAGETEASIVY FYAQSPELKESELYDTMAEHWQKTSIMMEQIAASNNILYFHVLQPNQYYFTNRVFSETEKKIAFDSDSPFREATELGYPV LLSKTDNLKQNGVNFFNGVKILDNAKEIVYIDSCCHYTEAGENILSDFIANSIFTTLTANENQLGDSKNE
Sequences:
>Translated_470_residues MKKLSFLKNTSELWKIVLMNIIFLFVFLELGSLGWYFFKYKQFFYTREKVTENNQEEKLENENENKNANVNTNPMGINLA GIRLESSVIERIHPYFGYVQKPGPDFREDFKYNDAGFISPYDYPYKKKNNNQYIIGIFGGSVASNYSIYEIKNQILEKKL KQLPEFRDKEFIILSLAIGGYKQPQQLILLNYFLSIGQKFDMIINIDGFNEVTIAKSNNENAVNIMMPSTNHVVPLTNIA NNSLSTKSIQAMLKINDSKNKLKGTLETLDKCQVAYCYALTSIYVQNLAKKYRKNVKIFDKERKKAASQAAGETEASIVY FYAQSPELKESELYDTMAEHWQKTSIMMEQIAASNNILYFHVLQPNQYYFTNRVFSETEKKIAFDSDSPFREATELGYPV LLSKTDNLKQNGVNFFNGVKILDNAKEIVYIDSCCHYTEAGENILSDFIANSIFTTLTANENQLGDSKNE >Mature_470_residues MKKLSFLKNTSELWKIVLMNIIFLFVFLELGSLGWYFFKYKQFFYTREKVTENNQEEKLENENENKNANVNTNPMGINLA GIRLESSVIERIHPYFGYVQKPGPDFREDFKYNDAGFISPYDYPYKKKNNNQYIIGIFGGSVASNYSIYEIKNQILEKKL KQLPEFRDKEFIILSLAIGGYKQPQQLILLNYFLSIGQKFDMIINIDGFNEVTIAKSNNENAVNIMMPSTNHVVPLTNIA NNSLSTKSIQAMLKINDSKNKLKGTLETLDKCQVAYCYALTSIYVQNLAKKYRKNVKIFDKERKKAASQAAGETEASIVY FYAQSPELKESELYDTMAEHWQKTSIMMEQIAASNNILYFHVLQPNQYYFTNRVFSETEKKIAFDSDSPFREATELGYPV LLSKTDNLKQNGVNFFNGVKILDNAKEIVYIDSCCHYTEAGENILSDFIANSIFTTLTANENQLGDSKNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54102; Mature: 54102
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSFLKNTSELWKIVLMNIIFLFVFLELGSLGWYFFKYKQFFYTREKVTENNQEEKLE CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHC NENENKNANVNTNPMGINLAGIRLESSVIERIHPYFGYVQKPGPDFREDFKYNDAGFISP CCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCC YDYPYKKKNNNQYIIGIFGGSVASNYSIYEIKNQILEKKLKQLPEFRDKEFIILSLAIGG CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC YKQPQQLILLNYFLSIGQKFDMIINIDGFNEVTIAKSNNENAVNIMMPSTNHVVPLTNIA CCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECCCC NNSLSTKSIQAMLKINDSKNKLKGTLETLDKCQVAYCYALTSIYVQNLAKKYRKNVKIFD CCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC KERKKAASQAAGETEASIVYFYAQSPELKESELYDTMAEHWQKTSIMMEQIAASNNILYF HHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE HVLQPNQYYFTNRVFSETEKKIAFDSDSPFREATELGYPVLLSKTDNLKQNGVNFFNGVK EEECCCCEEEHHHHHHHHHHHEEECCCCCHHHHHHCCCCEEEECCCCCHHCCCCHHCCEE ILDNAKEIVYIDSCCHYTEAGENILSDFIANSIFTTLTANENQLGDSKNE EECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC >Mature Secondary Structure MKKLSFLKNTSELWKIVLMNIIFLFVFLELGSLGWYFFKYKQFFYTREKVTENNQEEKLE CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHC NENENKNANVNTNPMGINLAGIRLESSVIERIHPYFGYVQKPGPDFREDFKYNDAGFISP CCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCC YDYPYKKKNNNQYIIGIFGGSVASNYSIYEIKNQILEKKLKQLPEFRDKEFIILSLAIGG CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC YKQPQQLILLNYFLSIGQKFDMIINIDGFNEVTIAKSNNENAVNIMMPSTNHVVPLTNIA CCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECCCC NNSLSTKSIQAMLKINDSKNKLKGTLETLDKCQVAYCYALTSIYVQNLAKKYRKNVKIFD CCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC KERKKAASQAAGETEASIVYFYAQSPELKESELYDTMAEHWQKTSIMMEQIAASNNILYF HHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE HVLQPNQYYFTNRVFSETEKKIAFDSDSPFREATELGYPVLLSKTDNLKQNGVNFFNGVK EEECCCCEEEHHHHHHHHHHHEEECCCCCHHHHHHCCCCEEEECCCCCHHCCCCHHCCEE ILDNAKEIVYIDSCCHYTEAGENILSDFIANSIFTTLTANENQLGDSKNE EECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA