Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475357

Identifier: 113475357

GI number: 113475357

Start: 2549833

End: 2551644

Strand: Reverse

Name: 113475357

Synonym: Tery_1674

Alternate gene names: NA

Gene position: 2551644-2549833 (Counterclockwise)

Preceding gene: 113475359

Following gene: 113475356

Centisome position: 32.92

GC content: 28.04

Gene sequence:

>1812_bases
ATGCAAAAAAATAATTATAAATTAAGTTATAGATTAATTTTAGGCATCAGTTTATGTCTAGCAATAATTCCAGCTATAGT
TTTAGGAATTCTTATCCTTAAATATAGTATTAATGTACCAATTCAAGACCAATGGCAAATCTCTGCTATTTTTGAAAAAT
TCAATCAAGGAACCCTATCTTTTAATGATTTAATAGCACAACATAATGAAAGTAGAAAATTTTTTCCCCGGCTAATTTTT
CTGACCTTAGCATTGATCACTAAATGGAATATTAGATATGAAATGTTAGTTACATTTTTACTAGCCTGTATAGTTTCTGT
AAATATTTATCTGTTAAATAGACTAACAATATCTGGTTCGCATATTAAAAGTATAACCATAGCATTAATATCTAATATAT
TCATCTTTTCTGCTGTTCAATATGAAAATTGGTTGTGGGGTATTCAAATAGTCGTTTTTACTCCTATAGTCTGCATTACT
ACCTGTATATTAATTGCTTATTCTCCACTAAATAATATAGCCAAAATTTTAATTTGTATGGCCTTATCAACCATCAGCAC
TTTTTCTTATGCTAATGGTTTATTAGCTTGGGTAATAGTTTTACCAATACTAGCTTTAGTCAAACTAAAATCTTGGTCAG
AGATCAGGAAAAATATAATTTTATATCTGTTTTGGATAATTGGATTTATAGCTAATATAACCTTTTACTTTCATGATTAT
CAAAAACCATTATCTCACCCTAGTCCATTAGAATCACTTCAATATCCAGATCAAACTTTCCAATATTTTCTAGCATTTTT
AGGTAGTTCTCTAGGAATTGGTAGTAGTATACAACCTCTAAATAATTCAATTATTCTTGGCGCAGTAATTATTATTCTAT
TTATTGGTTTATTTTCTTATGTAATATGGCATATTAAAGACTATGAATTACGAGATAAAACTATTAGCTGGATTATGCTT
GGTTCATATACAGTTATTAGTGCTTTAGTTACATCATTTGGTCGAGTAACACTTGGTATAGATCAAGCTCTTTCATCAAG
ATATACAACATTTTCAACATACATTATTATCTCTATAATTCATTTAATGATAATTGTGGGAGAAGATGCTATTAAAAAAT
ATTCTTTTTTAATTAATAGAAGTTTATTCTCGAAAGTTATTTGCTGGTTTATTGGTATAATAACTGTTATACAAGTACAT
AATTTCACCTATAGTGTAGAAAAGATGAAGTTATGGAAACAAGATTTTTTGAAATATAAAGGCTGTTTACTACTAATTGA
TTTTACTCATGACAACTGTCAAAATCTAATTGATTCTTACTATTTTGAATATATAAAACAACGGGCGCATTACTTAACAG
AATTAGGCTTTTTAGATCCTGGCTTAATCAAGACTAATCAAATTCCAGAGTTAATAGACACGAATAATAGTAGACAAGTA
GAAGGTACTTTTGAAAAGCTAGAATTTATTGGGGCTAATAATTTATTAGCAACTGGTTGGGCAATATTTACTGATACAAA
TTTACCTGTAGATGCAATAGTGCTTAGTTATGATAATTGGCAAGGTGAACCTATTGTTTCTGCTGTGGCAGATATGACAA
TGTCAAGACCTAACCTTGTCAAAGAATTTAAGAGTCAAAAATATTTTAAATCAGGATGGCAAAAAGTATTATCTACTCAT
AGGTTTCCCCAAGGAAATATTTATATAAAGGCTTGGGCATTAGATACAAATACAACTAAATTTTATCAAATTCCTGGTAT
TTATATAGTCAACAAAAATGGTGAAAATATTAGTGTTTTATTAGGTAATTAA

Upstream 100 bases:

>100_bases
AGAATTGTTTGTGTATCTAATTTATCATGAGCTTTTCAGGTTACAGAATTGCCAAAAAAATATTAACTGAAGCGTATTGA
AATATAATCTCCACAAAAAT

Downstream 100 bases:

>100_bases
ATAAGTAATAGTAACTATTCAGATTTTCCTTGGTCATGCTACGCAAACATCTTTTTGAACATATTTAACTAACTCCTAAG
GTTAGCTGATGAGCTTTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MQKNNYKLSYRLILGISLCLAIIPAIVLGILILKYSINVPIQDQWQISAIFEKFNQGTLSFNDLIAQHNESRKFFPRLIF
LTLALITKWNIRYEMLVTFLLACIVSVNIYLLNRLTISGSHIKSITIALISNIFIFSAVQYENWLWGIQIVVFTPIVCIT
TCILIAYSPLNNIAKILICMALSTISTFSYANGLLAWVIVLPILALVKLKSWSEIRKNIILYLFWIIGFIANITFYFHDY
QKPLSHPSPLESLQYPDQTFQYFLAFLGSSLGIGSSIQPLNNSIILGAVIIILFIGLFSYVIWHIKDYELRDKTISWIML
GSYTVISALVTSFGRVTLGIDQALSSRYTTFSTYIIISIIHLMIIVGEDAIKKYSFLINRSLFSKVICWFIGIITVIQVH
NFTYSVEKMKLWKQDFLKYKGCLLLIDFTHDNCQNLIDSYYFEYIKQRAHYLTELGFLDPGLIKTNQIPELIDTNNSRQV
EGTFEKLEFIGANNLLATGWAIFTDTNLPVDAIVLSYDNWQGEPIVSAVADMTMSRPNLVKEFKSQKYFKSGWQKVLSTH
RFPQGNIYIKAWALDTNTTKFYQIPGIYIVNKNGENISVLLGN

Sequences:

>Translated_603_residues
MQKNNYKLSYRLILGISLCLAIIPAIVLGILILKYSINVPIQDQWQISAIFEKFNQGTLSFNDLIAQHNESRKFFPRLIF
LTLALITKWNIRYEMLVTFLLACIVSVNIYLLNRLTISGSHIKSITIALISNIFIFSAVQYENWLWGIQIVVFTPIVCIT
TCILIAYSPLNNIAKILICMALSTISTFSYANGLLAWVIVLPILALVKLKSWSEIRKNIILYLFWIIGFIANITFYFHDY
QKPLSHPSPLESLQYPDQTFQYFLAFLGSSLGIGSSIQPLNNSIILGAVIIILFIGLFSYVIWHIKDYELRDKTISWIML
GSYTVISALVTSFGRVTLGIDQALSSRYTTFSTYIIISIIHLMIIVGEDAIKKYSFLINRSLFSKVICWFIGIITVIQVH
NFTYSVEKMKLWKQDFLKYKGCLLLIDFTHDNCQNLIDSYYFEYIKQRAHYLTELGFLDPGLIKTNQIPELIDTNNSRQV
EGTFEKLEFIGANNLLATGWAIFTDTNLPVDAIVLSYDNWQGEPIVSAVADMTMSRPNLVKEFKSQKYFKSGWQKVLSTH
RFPQGNIYIKAWALDTNTTKFYQIPGIYIVNKNGENISVLLGN
>Mature_603_residues
MQKNNYKLSYRLILGISLCLAIIPAIVLGILILKYSINVPIQDQWQISAIFEKFNQGTLSFNDLIAQHNESRKFFPRLIF
LTLALITKWNIRYEMLVTFLLACIVSVNIYLLNRLTISGSHIKSITIALISNIFIFSAVQYENWLWGIQIVVFTPIVCIT
TCILIAYSPLNNIAKILICMALSTISTFSYANGLLAWVIVLPILALVKLKSWSEIRKNIILYLFWIIGFIANITFYFHDY
QKPLSHPSPLESLQYPDQTFQYFLAFLGSSLGIGSSIQPLNNSIILGAVIIILFIGLFSYVIWHIKDYELRDKTISWIML
GSYTVISALVTSFGRVTLGIDQALSSRYTTFSTYIIISIIHLMIIVGEDAIKKYSFLINRSLFSKVICWFIGIITVIQVH
NFTYSVEKMKLWKQDFLKYKGCLLLIDFTHDNCQNLIDSYYFEYIKQRAHYLTELGFLDPGLIKTNQIPELIDTNNSRQV
EGTFEKLEFIGANNLLATGWAIFTDTNLPVDAIVLSYDNWQGEPIVSAVADMTMSRPNLVKEFKSQKYFKSGWQKVLSTH
RFPQGNIYIKAWALDTNTTKFYQIPGIYIVNKNGENISVLLGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68998; Mature: 68998

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNNYKLSYRLILGISLCLAIIPAIVLGILILKYSINVPIQDQWQISAIFEKFNQGTLS
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
FNDLIAQHNESRKFFPRLIFLTLALITKWNIRYEMLVTFLLACIVSVNIYLLNRLTISGS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCC
HIKSITIALISNIFIFSAVQYENWLWGIQIVVFTPIVCITTCILIAYSPLNNIAKILICM
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ALSTISTFSYANGLLAWVIVLPILALVKLKSWSEIRKNIILYLFWIIGFIANITFYFHDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECH
QKPLSHPSPLESLQYPDQTFQYFLAFLGSSLGIGSSIQPLNNSIILGAVIIILFIGLFSY
HCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VIWHIKDYELRDKTISWIMLGSYTVISALVTSFGRVTLGIDQALSSRYTTFSTYIIISII
HHHHCCCCEECCCEEEEEEECHHHHHHHHHHHCCCEEEEHHHHHHCCHHHHHHHHHHHHH
HLMIIVGEDAIKKYSFLINRSLFSKVICWFIGIITVIQVHNFTYSVEKMKLWKQDFLKYK
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHC
GCLLLIDFTHDNCQNLIDSYYFEYIKQRAHYLTELGFLDPGLIKTNQIPELIDTNNSRQV
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCEE
EGTFEKLEFIGANNLLATGWAIFTDTNLPVDAIVLSYDNWQGEPIVSAVADMTMSRPNLV
HHHHHHHHHHCCCCEEECCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHH
KEFKSQKYFKSGWQKVLSTHRFPQGNIYIKAWALDTNTTKFYQIPGIYIVNKNGENISVL
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEECCEEEEEECCCCEEEEE
LGN
ECC
>Mature Secondary Structure
MQKNNYKLSYRLILGISLCLAIIPAIVLGILILKYSINVPIQDQWQISAIFEKFNQGTLS
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
FNDLIAQHNESRKFFPRLIFLTLALITKWNIRYEMLVTFLLACIVSVNIYLLNRLTISGS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCC
HIKSITIALISNIFIFSAVQYENWLWGIQIVVFTPIVCITTCILIAYSPLNNIAKILICM
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ALSTISTFSYANGLLAWVIVLPILALVKLKSWSEIRKNIILYLFWIIGFIANITFYFHDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECH
QKPLSHPSPLESLQYPDQTFQYFLAFLGSSLGIGSSIQPLNNSIILGAVIIILFIGLFSY
HCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VIWHIKDYELRDKTISWIMLGSYTVISALVTSFGRVTLGIDQALSSRYTTFSTYIIISII
HHHHCCCCEECCCEEEEEEECHHHHHHHHHHHCCCEEEEHHHHHHCCHHHHHHHHHHHHH
HLMIIVGEDAIKKYSFLINRSLFSKVICWFIGIITVIQVHNFTYSVEKMKLWKQDFLKYK
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHC
GCLLLIDFTHDNCQNLIDSYYFEYIKQRAHYLTELGFLDPGLIKTNQIPELIDTNNSRQV
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCEE
EGTFEKLEFIGANNLLATGWAIFTDTNLPVDAIVLSYDNWQGEPIVSAVADMTMSRPNLV
HHHHHHHHHHCCCCEEECCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHH
KEFKSQKYFKSGWQKVLSTHRFPQGNIYIKAWALDTNTTKFYQIPGIYIVNKNGENISVL
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEECCEEEEEECCCCEEEEE
LGN
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA