Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475360

Identifier: 113475360

GI number: 113475360

Start: 2555069

End: 2556322

Strand: Reverse

Name: 113475360

Synonym: Tery_1677

Alternate gene names: NA

Gene position: 2556322-2555069 (Counterclockwise)

Preceding gene: 113475361

Following gene: 113475359

Centisome position: 32.98

GC content: 32.3

Gene sequence:

>1254_bases
ATGGAAAACTTAGCAGAAAAAATAAACAAGCTACAAAATTTTGTAGTAAATCTAGGGATAATAATAGCTACATTTACATT
TGTTGTGATTGTGGGAGAAATAGGATTAAGAATAGCAGGAATTGAACATCTCCCACCACCAAGAACAGATGAAAAATCAG
AAAGTAAGTCTCTATATACTAGTAAAGATCCAAATCGTGGTTGGGCAGGAAATTCTAACGCTACAGCATTTTGGACAGGA
GAAGGTATACCTTCAGAGTTGAAAATGAATAGTGGGGGATTTCGTGATTATGAACGTAGTAAAAATAAACCAGAAAATGG
CTTAAGAATTGCCTTATTAGGAGATTCTTTTACAGAAGCAGTTCATGTAAAATTAGAAGATACTTATGGTGCAATAATAG
AGCAAAATTTACAACAATGTCCTGACTTAAAAGACCAGAAAGTTGAAGTAATGAATTTTGGAGTACAGGGTTATGGAACA
GCTCAAGAATTAATGACATTGAGACATCATGTTTGGGATTATTCACCAGATTTAGTTATATTAGCTTTTTATGCTGGTAA
TGATATTCGGAATAATTATCGACCTCTAGATCACGACCACTTAAGACCTTATTTTGTTTATAAAAATGGTCAGTTAGAAT
CAGATATGTCATTCCGTACAATGAAACCTTGGGAAAGAGGGCGTTATGTTTTTTCAATGGTTGATATATTGCCAATTTGG
TTGGTGAGAAATTCCCGAATTTTACAGCTAATCAGAAAAGTTGATATGGATTATAAACAAAGTCAATTTTTAAATTATAA
TGGTCAAACTATTATCTCTTTTTATCGAGAACCTGAATCAAATTCCGACTGGGATAAAGGTTGGCAAGTAACGGAAGGTT
TGATTACATTAATGAGAGATGAAGTCTATAAAAATAGAGCAGATTTTATGATTATAGCAATTAGTGATTCTCATCAAGTA
CATCCTGATTTAGAGTATCGTGAAAAATTTAAAAATGCTCATAATTTATCAGATTTATATTATCCAGATAGAAGGATAGA
AGCGTTTGGTAAACAAGAGAATATTCCAGTATATATTTTAGCGGGACAATTAGGAGATAAAGCAAAAAAAACAGGCAAGT
GTTTATATGGGTTTGATAATGGGGAACCCTGTGGAGGTCATTGGAATATAGAAGGTCATAAATTTGTAGGAGAAGTCATG
TCAAATTATTTATGTGATCAGTATAAATTGGAAAAGTATAGCGATTCTAAATGA

Upstream 100 bases:

>100_bases
ATAATTCCAACCAATTACCTTTTTAATTCTCTCCCCAATTTCGTGAAAAATTAATATAAAAATAATCTCAGTACTTTCTC
AGGTTGAATCGAAAATATAG

Downstream 100 bases:

>100_bases
TTGATAATGTTGTACATTTAGTTCTCACATATTAGATATTAGCTATTAATTAATTGTCCCTAAAGCAGGAAATAAAATTG
TTATATGGGTAGACAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MENLAEKINKLQNFVVNLGIIIATFTFVVIVGEIGLRIAGIEHLPPPRTDEKSESKSLYTSKDPNRGWAGNSNATAFWTG
EGIPSELKMNSGGFRDYERSKNKPENGLRIALLGDSFTEAVHVKLEDTYGAIIEQNLQQCPDLKDQKVEVMNFGVQGYGT
AQELMTLRHHVWDYSPDLVILAFYAGNDIRNNYRPLDHDHLRPYFVYKNGQLESDMSFRTMKPWERGRYVFSMVDILPIW
LVRNSRILQLIRKVDMDYKQSQFLNYNGQTIISFYREPESNSDWDKGWQVTEGLITLMRDEVYKNRADFMIIAISDSHQV
HPDLEYREKFKNAHNLSDLYYPDRRIEAFGKQENIPVYILAGQLGDKAKKTGKCLYGFDNGEPCGGHWNIEGHKFVGEVM
SNYLCDQYKLEKYSDSK

Sequences:

>Translated_417_residues
MENLAEKINKLQNFVVNLGIIIATFTFVVIVGEIGLRIAGIEHLPPPRTDEKSESKSLYTSKDPNRGWAGNSNATAFWTG
EGIPSELKMNSGGFRDYERSKNKPENGLRIALLGDSFTEAVHVKLEDTYGAIIEQNLQQCPDLKDQKVEVMNFGVQGYGT
AQELMTLRHHVWDYSPDLVILAFYAGNDIRNNYRPLDHDHLRPYFVYKNGQLESDMSFRTMKPWERGRYVFSMVDILPIW
LVRNSRILQLIRKVDMDYKQSQFLNYNGQTIISFYREPESNSDWDKGWQVTEGLITLMRDEVYKNRADFMIIAISDSHQV
HPDLEYREKFKNAHNLSDLYYPDRRIEAFGKQENIPVYILAGQLGDKAKKTGKCLYGFDNGEPCGGHWNIEGHKFVGEVM
SNYLCDQYKLEKYSDSK
>Mature_417_residues
MENLAEKINKLQNFVVNLGIIIATFTFVVIVGEIGLRIAGIEHLPPPRTDEKSESKSLYTSKDPNRGWAGNSNATAFWTG
EGIPSELKMNSGGFRDYERSKNKPENGLRIALLGDSFTEAVHVKLEDTYGAIIEQNLQQCPDLKDQKVEVMNFGVQGYGT
AQELMTLRHHVWDYSPDLVILAFYAGNDIRNNYRPLDHDHLRPYFVYKNGQLESDMSFRTMKPWERGRYVFSMVDILPIW
LVRNSRILQLIRKVDMDYKQSQFLNYNGQTIISFYREPESNSDWDKGWQVTEGLITLMRDEVYKNRADFMIIAISDSHQV
HPDLEYREKFKNAHNLSDLYYPDRRIEAFGKQENIPVYILAGQLGDKAKKTGKCLYGFDNGEPCGGHWNIEGHKFVGEVM
SNYLCDQYKLEKYSDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48134; Mature: 48134

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLAEKINKLQNFVVNLGIIIATFTFVVIVGEIGLRIAGIEHLPPPRTDEKSESKSLYT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHCCCCC
SKDPNRGWAGNSNATAFWTGEGIPSELKMNSGGFRDYERSKNKPENGLRIALLGDSFTEA
CCCCCCCCCCCCCCEEEEECCCCCHHEEECCCCCCCHHHCCCCCCCCEEEEEECCCCCEE
VHVKLEDTYGAIIEQNLQQCPDLKDQKVEVMNFGVQGYGTAQELMTLRHHVWDYSPDLVI
EEEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEE
LAFYAGNDIRNNYRPLDHDHLRPYFVYKNGQLESDMSFRTMKPWERGRYVFSMVDILPIW
EEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHH
LVRNSRILQLIRKVDMDYKQSQFLNYNGQTIISFYREPESNSDWDKGWQVTEGLITLMRD
HHCCHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
EVYKNRADFMIIAISDSHQVHPDLEYREKFKNAHNLSDLYYPDRRIEAFGKQENIPVYIL
HHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCHHHCCCCHHHHHCCCCCCCCEEEE
AGQLGDKAKKTGKCLYGFDNGEPCGGHWNIEGHKFVGEVMSNYLCDQYKLEKYSDSK
ECCCCCCHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MENLAEKINKLQNFVVNLGIIIATFTFVVIVGEIGLRIAGIEHLPPPRTDEKSESKSLYT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHCCCCC
SKDPNRGWAGNSNATAFWTGEGIPSELKMNSGGFRDYERSKNKPENGLRIALLGDSFTEA
CCCCCCCCCCCCCCEEEEECCCCCHHEEECCCCCCCHHHCCCCCCCCEEEEEECCCCCEE
VHVKLEDTYGAIIEQNLQQCPDLKDQKVEVMNFGVQGYGTAQELMTLRHHVWDYSPDLVI
EEEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEE
LAFYAGNDIRNNYRPLDHDHLRPYFVYKNGQLESDMSFRTMKPWERGRYVFSMVDILPIW
EEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHH
LVRNSRILQLIRKVDMDYKQSQFLNYNGQTIISFYREPESNSDWDKGWQVTEGLITLMRD
HHCCHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
EVYKNRADFMIIAISDSHQVHPDLEYREKFKNAHNLSDLYYPDRRIEAFGKQENIPVYIL
HHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCHHHCCCCHHHHHCCCCCCCCEEEE
AGQLGDKAKKTGKCLYGFDNGEPCGGHWNIEGHKFVGEVMSNYLCDQYKLEKYSDSK
ECCCCCCHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA