| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475327
Identifier: 113475327
GI number: 113475327
Start: 2505159
End: 2505914
Strand: Direct
Name: 113475327
Synonym: Tery_1641
Alternate gene names: NA
Gene position: 2505159-2505914 (Clockwise)
Preceding gene: 113475326
Following gene: 113475328
Centisome position: 32.32
GC content: 36.77
Gene sequence:
>756_bases ATGAAATCATTAATTCGTTTAAGTGCAGTGTTAGGAGTAATGGTTAGCAGTTTGATTGGACCTTCTCTGAAAGATATGTC TGCATTAGCACTGCCGGAGAAAGAAGTGTTACAGAAGTTAACTCCTGTGCCGGTTTTTACAATTACCGATCAAAATGGAT CTCCTCTTGTCCGATCAATTAGAAGAGAAGGTAATGAAGTTAATTCTTCTGTGGCGGGAGTTTTTATTAGTAAGAGTGAT GCAGATGCTTTTGTGAACAAATTAAAAGGAGAAAATCCTGATTTAGCTGCTACGGTTAAGGTTGTCCCTGTTTCTCTAGG TGAAGTTTATGAAAAGAGCCAATCTATACAAGAGAATGGTCAAAGACTAGAATTTGCATATGTTCCTATTAGAAGACAGG TTGAATCTGCTAAGGCTTTGCTTGAGAAGAATGGCCAGGATTTTAACAATTTTAGTGGGGTACCTTTGTTTATGGCTAAA GGAGGACCTGATGATGGATATTTAACTATTCAGCGCGGAGAAAAGCAAGTTATTCCTATGTTTTTTAATAAGGAAGATTT GCAAGGAATGTTGGATAGGGCTGAAACTCAACAACCTGAAGTTTTTTCTTCTGTGGAGATTGAGGTTGTAAATCTTGAGG GTGTGATTAATGCTTTAAAGAATGATGACGATCCTTTCTTGGAAAAAATTATTTTTATTCCTCCACGGGAGTCTTTGGAG TTTGTACAACAGTTGAGAGAATCTGATAATAAATAA
Upstream 100 bases:
>100_bases GATAGGATAAATTTCTTATTTGACTTTGATGAATGTTTTCGCTGTGTCTGATGTTAATACTTTTTTTTGATGGTAATATC TTAAGAAAACTGGAGAATTT
Downstream 100 bases:
>100_bases GTTGAGATTCTGAGTGATTGATAGATGAATTTTCCTTTTAGGTGGCTGGTTTCAGGTAATGAACTCTGGGAATGGTATTG TCAAACTAAGGCTTGTGCTT
Product: Tic22-like
Products: NA
Alternate protein names: Envelope Protein Translocase Family Protein; Tic22-Like Family Protein; Tic22-Like Protein; Tic22-Like Family; Tic22-Like
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKSLIRLSAVLGVMVSSLIGPSLKDMSALALPEKEVLQKLTPVPVFTITDQNGSPLVRSIRREGNEVNSSVAGVFISKSD ADAFVNKLKGENPDLAATVKVVPVSLGEVYEKSQSIQENGQRLEFAYVPIRRQVESAKALLEKNGQDFNNFSGVPLFMAK GGPDDGYLTIQRGEKQVIPMFFNKEDLQGMLDRAETQQPEVFSSVEIEVVNLEGVINALKNDDDPFLEKIIFIPPRESLE FVQQLRESDNK
Sequences:
>Translated_251_residues MKSLIRLSAVLGVMVSSLIGPSLKDMSALALPEKEVLQKLTPVPVFTITDQNGSPLVRSIRREGNEVNSSVAGVFISKSD ADAFVNKLKGENPDLAATVKVVPVSLGEVYEKSQSIQENGQRLEFAYVPIRRQVESAKALLEKNGQDFNNFSGVPLFMAK GGPDDGYLTIQRGEKQVIPMFFNKEDLQGMLDRAETQQPEVFSSVEIEVVNLEGVINALKNDDDPFLEKIIFIPPRESLE FVQQLRESDNK >Mature_251_residues MKSLIRLSAVLGVMVSSLIGPSLKDMSALALPEKEVLQKLTPVPVFTITDQNGSPLVRSIRREGNEVNSSVAGVFISKSD ADAFVNKLKGENPDLAATVKVVPVSLGEVYEKSQSIQENGQRLEFAYVPIRRQVESAKALLEKNGQDFNNFSGVPLFMAK GGPDDGYLTIQRGEKQVIPMFFNKEDLQGMLDRAETQQPEVFSSVEIEVVNLEGVINALKNDDDPFLEKIIFIPPRESLE FVQQLRESDNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27739; Mature: 27739
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLIRLSAVLGVMVSSLIGPSLKDMSALALPEKEVLQKLTPVPVFTITDQNGSPLVRSI CCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCHHHHHH RREGNEVNSSVAGVFISKSDADAFVNKLKGENPDLAATVKVVPVSLGEVYEKSQSIQENG HHCCCHHCCHHEEEEEECCCHHHHHHHHCCCCCCEEEEEEEEECHHHHHHHHHHHHHHCC QRLEFAYVPIRRQVESAKALLEKNGQDFNNFSGVPLFMAKGGPDDGYLTIQRGEKQVIPM CEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEE FFNKEDLQGMLDRAETQQPEVFSSVEIEVVNLEGVINALKNDDDPFLEKIIFIPPRESLE EECHHHHHHHHHHHCCCCCCHHCCEEEEEEEHHHHHHHHCCCCCHHHHHEEECCCHHHHH FVQQLRESDNK HHHHHHHCCCC >Mature Secondary Structure MKSLIRLSAVLGVMVSSLIGPSLKDMSALALPEKEVLQKLTPVPVFTITDQNGSPLVRSI CCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCHHHHHH RREGNEVNSSVAGVFISKSDADAFVNKLKGENPDLAATVKVVPVSLGEVYEKSQSIQENG HHCCCHHCCHHEEEEEECCCHHHHHHHHCCCCCCEEEEEEEEECHHHHHHHHHHHHHHCC QRLEFAYVPIRRQVESAKALLEKNGQDFNNFSGVPLFMAKGGPDDGYLTIQRGEKQVIPM CEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEE FFNKEDLQGMLDRAETQQPEVFSSVEIEVVNLEGVINALKNDDDPFLEKIIFIPPRESLE EECHHHHHHHHHHHCCCCCCHHCCEEEEEEEHHHHHHHHCCCCCHHHHHEEECCCHHHHH FVQQLRESDNK HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA