| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is yiiD [C]
Identifier: 113475326
GI number: 113475326
Start: 2502022
End: 2502573
Strand: Direct
Name: yiiD [C]
Synonym: Tery_1640
Alternate gene names: 113475326
Gene position: 2502022-2502573 (Clockwise)
Preceding gene: 113475324
Following gene: 113475327
Centisome position: 32.28
GC content: 38.04
Gene sequence:
>552_bases ATGGGTTTCTGGAAAAATTTGTTTACCGGTTCTGAGCCAACATCTCAGTCTCAAAATTTAGATTTTGAAAGATACACAAC TATTGAGGAACAAGATGCTTCTTCTCAAGCTTTTTGTTCATCTAATAGAAGTAATGGCCGTATCTTTTTTACTACCGATC GAGATATAGATATCTATGAACTCGAAGATCTTTGTAATGCTGTTGGTTGGTCTCGTCGTCCATTACGTAAAGTCAAAAAG GCCATTCAACATAGTTTTCTTGTGGTTTCCATGTGGCAAATGCGAGGTAGTCAGCGAAGACTGATTGGTTTTGCTCGAGC GACATCTGACCATGCCTTTAATGCTACTCTTTGGGATGTAGTTGTTCATCCTGACTTCCAAAGCAAAGGCTTGGGAAAGG CATTGATGAATTACATCATCAAAAAACTTCGTAGTGAAGATATAAGTAACATTACCTTATTTGCAGACCCTCATGTTGTT GATTTTTACCGAAATTTAGGTTTTATCTCTGACCCTGAGGGAATTAAAGGAATGTTCTGGTATCCAGATTAG
Upstream 100 bases:
>100_bases TGTTGATGATTTTAAACCCGGAGCCATAATCGAAGAGAGGGAACGGGATATATACTATCTAATAATGTCATTCAACTTCT ACTAACTTAACCACACCTGC
Downstream 100 bases:
>100_bases CTGTTTTTGAGTTGATAGAATATAACTAAACATGTTATATTATAGTTGCTAATCTAAGATTTACATTTTTTGAGTAGAGT TATTTTTATAAATTTTATTC
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MGFWKNLFTGSEPTSQSQNLDFERYTTIEEQDASSQAFCSSNRSNGRIFFTTDRDIDIYELEDLCNAVGWSRRPLRKVKK AIQHSFLVVSMWQMRGSQRRLIGFARATSDHAFNATLWDVVVHPDFQSKGLGKALMNYIIKKLRSEDISNITLFADPHVV DFYRNLGFISDPEGIKGMFWYPD
Sequences:
>Translated_183_residues MGFWKNLFTGSEPTSQSQNLDFERYTTIEEQDASSQAFCSSNRSNGRIFFTTDRDIDIYELEDLCNAVGWSRRPLRKVKK AIQHSFLVVSMWQMRGSQRRLIGFARATSDHAFNATLWDVVVHPDFQSKGLGKALMNYIIKKLRSEDISNITLFADPHVV DFYRNLGFISDPEGIKGMFWYPD >Mature_182_residues GFWKNLFTGSEPTSQSQNLDFERYTTIEEQDASSQAFCSSNRSNGRIFFTTDRDIDIYELEDLCNAVGWSRRPLRKVKKA IQHSFLVVSMWQMRGSQRRLIGFARATSDHAFNATLWDVVVHPDFQSKGLGKALMNYIIKKLRSEDISNITLFADPHVVD FYRNLGFISDPEGIKGMFWYPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 21149; Mature: 21018
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFWKNLFTGSEPTSQSQNLDFERYTTIEEQDASSQAFCSSNRSNGRIFFTTDRDIDIYE CCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCHHH LEDLCNAVGWSRRPLRKVKKAIQHSFLVVSMWQMRGSQRRLIGFARATSDHAFNATLWDV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCEEEEE VVHPDFQSKGLGKALMNYIIKKLRSEDISNITLFADPHVVDFYRNLGFISDPEGIKGMFW EECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCEEEE YPD CCC >Mature Secondary Structure GFWKNLFTGSEPTSQSQNLDFERYTTIEEQDASSQAFCSSNRSNGRIFFTTDRDIDIYE CCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCHHH LEDLCNAVGWSRRPLRKVKKAIQHSFLVVSMWQMRGSQRRLIGFARATSDHAFNATLWDV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCEEEEE VVHPDFQSKGLGKALMNYIIKKLRSEDISNITLFADPHVVDFYRNLGFISDPEGIKGMFW EECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCEEEE YPD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]