| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475291
Identifier: 113475291
GI number: 113475291
Start: 2447515
End: 2447886
Strand: Direct
Name: 113475291
Synonym: Tery_1600
Alternate gene names: NA
Gene position: 2447515-2447886 (Clockwise)
Preceding gene: 113475290
Following gene: 113475292
Centisome position: 31.58
GC content: 38.17
Gene sequence:
>372_bases ATGGATAATTTGGGAGGAATTATTCAACGAGCTGTTTATCTAGGAGTAGGGTTAGCTTCCTATGCAGGAGAGAAAGCTAG TCAAAAATTAACAGAACTAAGGATAGAAGCTCAAAAGCTGGCAGATGAAATGGTTAAGCGTGGTGAAATGACTACGGAAG AAGGTCGTAAATTTGTGGAAGATATGATGAATAAATCAATGATGCAGGAAGCACCTGTGAATCAGTCTCCAGAAAAAGGA CCTAATGAACCACGCCGTATAGAGATTATCTCGGATGATGAAGATTCATCTTCTTCAGATTCTACAGAAGTAGATAAAAT GCGCCAAGAAGTACATAAGTTACAAGAGGAATTACGTCGACTACAAAAATAA
Upstream 100 bases:
>100_bases TTGTCAGGACCGGAAGGTAGCAGCAACACGGGATGCTTGTAGTAGGCGTTGACTCCGGGTCACCCAACTAAAAGGAGCTC ATAAGATAGGATACATATAT
Downstream 100 bases:
>100_bases TAAATATATACTTATTAAGGTATATAGGTAGTCTAAGTTTTAAAGAAAAGCTAAAACATAACACTATAATGGAAGATTGG TCAAAGAACTTCTTTGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MDNLGGIIQRAVYLGVGLASYAGEKASQKLTELRIEAQKLADEMVKRGEMTTEEGRKFVEDMMNKSMMQEAPVNQSPEKG PNEPRRIEIISDDEDSSSSDSTEVDKMRQEVHKLQEELRRLQK
Sequences:
>Translated_123_residues MDNLGGIIQRAVYLGVGLASYAGEKASQKLTELRIEAQKLADEMVKRGEMTTEEGRKFVEDMMNKSMMQEAPVNQSPEKG PNEPRRIEIISDDEDSSSSDSTEVDKMRQEVHKLQEELRRLQK >Mature_123_residues MDNLGGIIQRAVYLGVGLASYAGEKASQKLTELRIEAQKLADEMVKRGEMTTEEGRKFVEDMMNKSMMQEAPVNQSPEKG PNEPRRIEIISDDEDSSSSDSTEVDKMRQEVHKLQEELRRLQK
Specific function: Unknown
COG id: COG3937
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13972; Mature: 13972
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNLGGIIQRAVYLGVGLASYAGEKASQKLTELRIEAQKLADEMVKRGEMTTEEGRKFVE CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DMMNKSMMQEAPVNQSPEKGPNEPRRIEIISDDEDSSSSDSTEVDKMRQEVHKLQEELRR HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LQK HCC >Mature Secondary Structure MDNLGGIIQRAVYLGVGLASYAGEKASQKLTELRIEAQKLADEMVKRGEMTTEEGRKFVE CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DMMNKSMMQEAPVNQSPEKGPNEPRRIEIISDDEDSSSSDSTEVDKMRQEVHKLQEELRR HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LQK HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA