| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475292
Identifier: 113475292
GI number: 113475292
Start: 2447955
End: 2448371
Strand: Direct
Name: 113475292
Synonym: Tery_1601
Alternate gene names: NA
Gene position: 2447955-2448371 (Clockwise)
Preceding gene: 113475291
Following gene: 113475293
Centisome position: 31.59
GC content: 35.25
Gene sequence:
>417_bases ATGGAAGATTGGTCAAAGAACTTCTTTGAAGTAATAGAAACTGCCATGTTAGAGGTAGAAAATTTCTTTGATGAAATGAC AAAAGAAGTTTCAGAAGTTTGTGATGAGTTGGGAAAGTTCTCCGAGGAAATTGCTGAGGAAATAAATATCAATATATTTG CAGAAATGGATGAGTATGTAGATCAATTGGTTGATCCGATCATTGAAGTGTACTTAGACTTCTATCCTGATATAGAGATA GAGGATGTAGACTACTATCTTGTTGATCATTTAGAACCTACCATAGAAAAACATCCAGCGTGTAGAGGATGTATACACTA TCATGGTCAATTTTATGGAGGAAATCTATTAGTTTGTGCCATGCACCCTTATGGTGTAGAAGATAAAAGTTGTCTAGACT GGGAACCTGAAGAATAG
Upstream 100 bases:
>100_bases TACAAGAGGAATTACGTCGACTACAAAAATAATAAATATATACTTATTAAGGTATATAGGTAGTCTAAGTTTTAAAGAAA AGCTAAAACATAACACTATA
Downstream 100 bases:
>100_bases TAGCTTTAACTAAAGTAAACATAAGACAGTATATAGATAAGATACAGATATTGTTGATGTCAGAAATACTTATAAGTTAT CTAAGTTAAAGGTTCACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MEDWSKNFFEVIETAMLEVENFFDEMTKEVSEVCDELGKFSEEIAEEININIFAEMDEYVDQLVDPIIEVYLDFYPDIEI EDVDYYLVDHLEPTIEKHPACRGCIHYHGQFYGGNLLVCAMHPYGVEDKSCLDWEPEE
Sequences:
>Translated_138_residues MEDWSKNFFEVIETAMLEVENFFDEMTKEVSEVCDELGKFSEEIAEEININIFAEMDEYVDQLVDPIIEVYLDFYPDIEI EDVDYYLVDHLEPTIEKHPACRGCIHYHGQFYGGNLLVCAMHPYGVEDKSCLDWEPEE >Mature_138_residues MEDWSKNFFEVIETAMLEVENFFDEMTKEVSEVCDELGKFSEEIAEEININIFAEMDEYVDQLVDPIIEVYLDFYPDIEI EDVDYYLVDHLEPTIEKHPACRGCIHYHGQFYGGNLLVCAMHPYGVEDKSCLDWEPEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16235; Mature: 16235
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDWSKNFFEVIETAMLEVENFFDEMTKEVSEVCDELGKFSEEIAEEININIFAEMDEYV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHH DQLVDPIIEVYLDFYPDIEIEDVDYYLVDHLEPTIEKHPACRGCIHYHGQFYGGNLLVCA HHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCHHHHHCCCHHHHHHHCCEEECCCEEEEE MHPYGVEDKSCLDWEPEE ECCCCCCCCCCCCCCCCC >Mature Secondary Structure MEDWSKNFFEVIETAMLEVENFFDEMTKEVSEVCDELGKFSEEIAEEININIFAEMDEYV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHH DQLVDPIIEVYLDFYPDIEIEDVDYYLVDHLEPTIEKHPACRGCIHYHGQFYGGNLLVCA HHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCHHHHHCCCHHHHHHHCCEEECCCEEEEE MHPYGVEDKSCLDWEPEE ECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA