Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475250

Identifier: 113475250

GI number: 113475250

Start: 2377529

End: 2379259

Strand: Direct

Name: 113475250

Synonym: Tery_1558

Alternate gene names: NA

Gene position: 2377529-2379259 (Clockwise)

Preceding gene: 113475246

Following gene: 113475251

Centisome position: 30.68

GC content: 29.98

Gene sequence:

>1731_bases
TTGAAAAAGCAGAGTAACCGAATTCAATCAATAATCTTTGAGATAGATGAGGTACTAAGTCAATCTAGTACCGAAAGTTA
TTGTCAAACTATTGAAGAAACACTGAAAAAATCTCAACATATACTACAGGAAACTCTAGACTATCTGAGTGAAGACCCAG
ATAATAGCTCCAATTTACAGCTACCCTCTATTGACACAGATTTAGCTTCAGAAGACACTACTGACTTTCAGATTAAACAA
CATCTAATAGAAAAGTTTTTTGCCCCTATTAACGAATATATACAGGAAGATTTCACCATACTTAAAAAACAACGGCAAGC
TCTGCAAGAAGAAATTAGGGGACTTGAAAAGCAAATAGAGGAAAATTCTTCTCTAGCTCAACAATACGCTAAACAAGAGC
AAATTATTTTTGAGTTTTCTCAAGTTTTACTTGGCCAGATACAAGAAATTTTGGTTGAACATTTGTTTTGCCTAGCAACT
CAATATTTATCTCCTGCTGAAGGTGGTTTATCCTCTAAAAAATATATTTCCCTACAGAATATGAAGGATATGGAAACCTC
TGAAGTGATAAAAATTTTCGAGGATAAACTAGAGGAAAGTTCTAAATATAATCACTCATTGATTGATGATTCAAATAATT
ATAATAGTGAGCAAAAAAAGCAAACTCAAGAAAATAATACAGAAGCAAATATGAATGATAAAAATTATCAAAATAAAAAG
CTATCCCCTCAAATAGATAGGTCAAATCAACCAATAGATAAATTCCCATTGCCTTATCCAGGTTATGAGTTTTTTGGAAA
TGTAGAGATGGAATCAAAAACAACAGAAACAGAAAAAAAAAAGCATCAATTAGAAAAATTAAATAGTCAAGCATTTTCTC
TAGAAGATAAGTCTAAGATTAACGAAAAGCAAGATTTAGAAACTATTAAAACTCATCAATATCCAAATGAAATTTATGCT
GGACTAAAACCTCCTAGTTTTGATGATAATGATATAGAAAATCAAAACTATCAAAATCAATCTTTAACAATAAAAGATGA
AGTACCAATAGTCCCAGAATTGAAATTAGATGCCTCAGAAAATAGAGACAATTTAGACAATCCTGAAGTCCTAGAATCTC
TGAGCAACTTATTTGGAAAGCTAGAAGTCGATAAAGAATCAAATAACAAATTAATTACTACTACAAAAAATCAACGAAAT
TTCAAAATTTCCACAGCTCAATTAGAAGAAGATACATATACTCAAGAATCTCTAAGACAAAGTCTATTACCTGTAGAAGA
ACCTGATAAAAAACCTAAGGAATTTTTATTAGATAATCAAACTCTACAATGTTTGCGTTCTGATTTAGATAGTTTAGAAG
AAATTGATGGAAATGAATTAATAGATGATCAGGAGCAAACTAAATTACAATTAGAAGAATATCAGAATGGAGATTTAACA
GAAAATACTCCCGGGTTTTCTGAGGATAGTTTGGTTATGACTTCAGAAGCAGAATTTACTAATTTAGAGGATTTGTTCAT
AAGTGTTGATGAGCAAAAAAAATCCAGAACGAGTCAACAAGAAAATATTTATGGTTCAGCAGAAAATACAACAAATAAAG
TAACTCTAGAAGATTTTTTGGATGACTCAAGATTAGAAATAGATGAAAAAATAACGGAAACAGATAATCAGGAATTTTCT
CCTCTAGAAACTTTACTTCAAGAGAAAAAAAATTCAGAAAAAAAAATTTGA

Upstream 100 bases:

>100_bases
TTGTATATCCACTAGGGAAAAGAAAGAAAAAAATTTACTTAGATTATACTTTTATAAGTTCTATGATTCCTAATAATTGG
TGATTAAAGGGGTAGTAATT

Downstream 100 bases:

>100_bases
GTTCATTAGAAATGGAAGCTGATATAACACTAGATCAGGCAACTTTACCATGGTATTTAGGAATTGATTTTGGTACTACT
AGTATTTCCGCAGCGTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MKKQSNRIQSIIFEIDEVLSQSSTESYCQTIEETLKKSQHILQETLDYLSEDPDNSSNLQLPSIDTDLASEDTTDFQIKQ
HLIEKFFAPINEYIQEDFTILKKQRQALQEEIRGLEKQIEENSSLAQQYAKQEQIIFEFSQVLLGQIQEILVEHLFCLAT
QYLSPAEGGLSSKKYISLQNMKDMETSEVIKIFEDKLEESSKYNHSLIDDSNNYNSEQKKQTQENNTEANMNDKNYQNKK
LSPQIDRSNQPIDKFPLPYPGYEFFGNVEMESKTTETEKKKHQLEKLNSQAFSLEDKSKINEKQDLETIKTHQYPNEIYA
GLKPPSFDDNDIENQNYQNQSLTIKDEVPIVPELKLDASENRDNLDNPEVLESLSNLFGKLEVDKESNNKLITTTKNQRN
FKISTAQLEEDTYTQESLRQSLLPVEEPDKKPKEFLLDNQTLQCLRSDLDSLEEIDGNELIDDQEQTKLQLEEYQNGDLT
ENTPGFSEDSLVMTSEAEFTNLEDLFISVDEQKKSRTSQQENIYGSAENTTNKVTLEDFLDDSRLEIDEKITETDNQEFS
PLETLLQEKKNSEKKI

Sequences:

>Translated_576_residues
MKKQSNRIQSIIFEIDEVLSQSSTESYCQTIEETLKKSQHILQETLDYLSEDPDNSSNLQLPSIDTDLASEDTTDFQIKQ
HLIEKFFAPINEYIQEDFTILKKQRQALQEEIRGLEKQIEENSSLAQQYAKQEQIIFEFSQVLLGQIQEILVEHLFCLAT
QYLSPAEGGLSSKKYISLQNMKDMETSEVIKIFEDKLEESSKYNHSLIDDSNNYNSEQKKQTQENNTEANMNDKNYQNKK
LSPQIDRSNQPIDKFPLPYPGYEFFGNVEMESKTTETEKKKHQLEKLNSQAFSLEDKSKINEKQDLETIKTHQYPNEIYA
GLKPPSFDDNDIENQNYQNQSLTIKDEVPIVPELKLDASENRDNLDNPEVLESLSNLFGKLEVDKESNNKLITTTKNQRN
FKISTAQLEEDTYTQESLRQSLLPVEEPDKKPKEFLLDNQTLQCLRSDLDSLEEIDGNELIDDQEQTKLQLEEYQNGDLT
ENTPGFSEDSLVMTSEAEFTNLEDLFISVDEQKKSRTSQQENIYGSAENTTNKVTLEDFLDDSRLEIDEKITETDNQEFS
PLETLLQEKKNSEKKI
>Mature_576_residues
MKKQSNRIQSIIFEIDEVLSQSSTESYCQTIEETLKKSQHILQETLDYLSEDPDNSSNLQLPSIDTDLASEDTTDFQIKQ
HLIEKFFAPINEYIQEDFTILKKQRQALQEEIRGLEKQIEENSSLAQQYAKQEQIIFEFSQVLLGQIQEILVEHLFCLAT
QYLSPAEGGLSSKKYISLQNMKDMETSEVIKIFEDKLEESSKYNHSLIDDSNNYNSEQKKQTQENNTEANMNDKNYQNKK
LSPQIDRSNQPIDKFPLPYPGYEFFGNVEMESKTTETEKKKHQLEKLNSQAFSLEDKSKINEKQDLETIKTHQYPNEIYA
GLKPPSFDDNDIENQNYQNQSLTIKDEVPIVPELKLDASENRDNLDNPEVLESLSNLFGKLEVDKESNNKLITTTKNQRN
FKISTAQLEEDTYTQESLRQSLLPVEEPDKKPKEFLLDNQTLQCLRSDLDSLEEIDGNELIDDQEQTKLQLEEYQNGDLT
ENTPGFSEDSLVMTSEAEFTNLEDLFISVDEQKKSRTSQQENIYGSAENTTNKVTLEDFLDDSRLEIDEKITETDNQEFS
PLETLLQEKKNSEKKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66731; Mature: 66731

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQSNRIQSIIFEIDEVLSQSSTESYCQTIEETLKKSQHILQETLDYLSEDPDNSSNLQ
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
LPSIDTDLASEDTTDFQIKQHLIEKFFAPINEYIQEDFTILKKQRQALQEEIRGLEKQIE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENSSLAQQYAKQEQIIFEFSQVLLGQIQEILVEHLFCLATQYLSPAEGGLSSKKYISLQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC
MKDMETSEVIKIFEDKLEESSKYNHSLIDDSNNYNSEQKKQTQENNTEANMNDKNYQNKK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
LSPQIDRSNQPIDKFPLPYPGYEFFGNVEMESKTTETEKKKHQLEKLNSQAFSLEDKSKI
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHC
NEKQDLETIKTHQYPNEIYAGLKPPSFDDNDIENQNYQNQSLTIKDEVPIVPELKLDASE
CHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
NRDNLDNPEVLESLSNLFGKLEVDKESNNKLITTTKNQRNFKISTAQLEEDTYTQESLRQ
CCCCCCCHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCEEEEHHHHCHHHHHHHHHHH
SLLPVEEPDKKPKEFLLDNQTLQCLRSDLDSLEEIDGNELIDDQEQTKLQLEEYQNGDLT
HCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
ENTPGFSEDSLVMTSEAEFTNLEDLFISVDEQKKSRTSQQENIYGSAENTTNKVTLEDFL
CCCCCCCCCCEEEECCCCCCCHHHHHEECCHHHHHHCHHHHHCCCCCCCCCCEEEHHHHC
DDSRLEIDEKITETDNQEFSPLETLLQEKKNSEKKI
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKQSNRIQSIIFEIDEVLSQSSTESYCQTIEETLKKSQHILQETLDYLSEDPDNSSNLQ
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
LPSIDTDLASEDTTDFQIKQHLIEKFFAPINEYIQEDFTILKKQRQALQEEIRGLEKQIE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENSSLAQQYAKQEQIIFEFSQVLLGQIQEILVEHLFCLATQYLSPAEGGLSSKKYISLQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC
MKDMETSEVIKIFEDKLEESSKYNHSLIDDSNNYNSEQKKQTQENNTEANMNDKNYQNKK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
LSPQIDRSNQPIDKFPLPYPGYEFFGNVEMESKTTETEKKKHQLEKLNSQAFSLEDKSKI
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHC
NEKQDLETIKTHQYPNEIYAGLKPPSFDDNDIENQNYQNQSLTIKDEVPIVPELKLDASE
CHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
NRDNLDNPEVLESLSNLFGKLEVDKESNNKLITTTKNQRNFKISTAQLEEDTYTQESLRQ
CCCCCCCHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCEEEEHHHHCHHHHHHHHHHH
SLLPVEEPDKKPKEFLLDNQTLQCLRSDLDSLEEIDGNELIDDQEQTKLQLEEYQNGDLT
HCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
ENTPGFSEDSLVMTSEAEFTNLEDLFISVDEQKKSRTSQQENIYGSAENTTNKVTLEDFL
CCCCCCCCCCEEEECCCCCCCHHHHHEECCHHHHHHCHHHHHCCCCCCCCCCEEEHHHHC
DDSRLEIDEKITETDNQEFSPLETLLQEKKNSEKKI
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA