| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475222
Identifier: 113475222
GI number: 113475222
Start: 2317702
End: 2317824
Strand: Direct
Name: 113475222
Synonym: Tery_1528
Alternate gene names: NA
Gene position: 2317702-2317824 (Clockwise)
Preceding gene: 113475221
Following gene: 113475227
Centisome position: 29.91
GC content: 35.77
Gene sequence:
>123_bases TTGCGTCAAAGAATTTCTCGGTTGGTCAGAAAGACTTTATCCTTTTCTAAAAAGCTTCGGTCCCATCTAGGAGATATTTG GTATTTCATTAATCATTATAATGAAGCGATCGCTTCACTGTAA
Upstream 100 bases:
>100_bases ATTTTGGGTCAGCTTACGAGCTTGTTTTTCCTGATTCAAGACATAAATCAGTGGGGAATATTCAGGTTGAACAGCTTATA TAGAAAGATTAAATAATACT
Downstream 100 bases:
>100_bases TTTTATCACTACATATACAGGACCACCAGATTTTTTTATCATCTCCTTCTGCTATTGTCTGAAATTTTATTCGTCTTGAT ATTGGTTGAAAATAATGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MRQRISRLVRKTLSFSKKLRSHLGDIWYFINHYNEAIASL
Sequences:
>Translated_40_residues MRQRISRLVRKTLSFSKKLRSHLGDIWYFINHYNEAIASL >Mature_40_residues MRQRISRLVRKTLSFSKKLRSHLGDIWYFINHYNEAIASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4850; Mature: 4850
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRISRLVRKTLSFSKKLRSHLGDIWYFINHYNEAIASL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRQRISRLVRKTLSFSKKLRSHLGDIWYFINHYNEAIASL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA