Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475190

Identifier: 113475190

GI number: 113475190

Start: 2263346

End: 2263981

Strand: Direct

Name: 113475190

Synonym: Tery_1490

Alternate gene names: NA

Gene position: 2263346-2263981 (Clockwise)

Preceding gene: 113475189

Following gene: 113475191

Centisome position: 29.2

GC content: 38.05

Gene sequence:

>636_bases
ATGGTAGGTTTGGAACCGACGGACAAAGTCTTAGATATTGGTTGCGGTGTAGGCCGCATTGCTTATCCTTTAACCTATTA
TCTAAAAGATGGAGGTGGATATGAGGGTTTTGATATTAGTGAAAAGTTAATTAAGTGGGCTAAATCTGAAATTAGTTTGA
GGTTTCCTAATTTCAATTTTCAGGTAGTCGATATCCATAATAAAATGTACAATCCTGAAGGAAATGTTCAAACTTTGGAT
TTTGTATTTCCCTACCAGGATAAAAGTTTTGATTGGGTTGTGTTAACTTCGGTGTTTACTCATTTGCAGGCAAAGGAAGT
CCGACATTATCTGGATGAAATTACTAGGGTATTAAAACCTCGCGGTCGATGTTTGTGTACTTGTTTTCTCTTAAACCCTG
AGTCAGAAGCAGCAATGACCAAAAATAAAAAGGCTCGTCAAATTGTACATCCACTTGAGGAGTGTTTTACCGCCACTCCC
AAGATACCAGAGTCTACTATTGGTTATAAAGAAGGGTTACTTTTAGGCTGGATGCAAGAACGAGGGTTAAGTCTAGCGGG
AAAATATTATGGTCATTGGTGTGGGCGGAGAAAGTTTACCAGTCATCAAGATATATTGGTATTGCAAAAAAGTTAG

Upstream 100 bases:

>100_bases
TTTAGAACCCTCTTTGCCTATTCCTCCTCATGAATACATTAAGTTTGTAGGGGGGCATTTTACAGATGTGGGTTTCAACT
TTCTCGGTTATTAGATCCAA

Downstream 100 bases:

>100_bases
GGCAAATGGTCTGGCAATGGTATTGTAAAAATTTATTTAAATGTTGGTTAACGACCAGTGCTTTTCAGAGATTACTTTTG
ACTTTCTTAATGGTAAATCA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MVGLEPTDKVLDIGCGVGRIAYPLTYYLKDGGGYEGFDISEKLIKWAKSEISLRFPNFNFQVVDIHNKMYNPEGNVQTLD
FVFPYQDKSFDWVVLTSVFTHLQAKEVRHYLDEITRVLKPRGRCLCTCFLLNPESEAAMTKNKKARQIVHPLEECFTATP
KIPESTIGYKEGLLLGWMQERGLSLAGKYYGHWCGRRKFTSHQDILVLQKS

Sequences:

>Translated_211_residues
MVGLEPTDKVLDIGCGVGRIAYPLTYYLKDGGGYEGFDISEKLIKWAKSEISLRFPNFNFQVVDIHNKMYNPEGNVQTLD
FVFPYQDKSFDWVVLTSVFTHLQAKEVRHYLDEITRVLKPRGRCLCTCFLLNPESEAAMTKNKKARQIVHPLEECFTATP
KIPESTIGYKEGLLLGWMQERGLSLAGKYYGHWCGRRKFTSHQDILVLQKS
>Mature_211_residues
MVGLEPTDKVLDIGCGVGRIAYPLTYYLKDGGGYEGFDISEKLIKWAKSEISLRFPNFNFQVVDIHNKMYNPEGNVQTLD
FVFPYQDKSFDWVVLTSVFTHLQAKEVRHYLDEITRVLKPRGRCLCTCFLLNPESEAAMTKNKKARQIVHPLEECFTATP
KIPESTIGYKEGLLLGWMQERGLSLAGKYYGHWCGRRKFTSHQDILVLQKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti expE3 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 24219; Mature: 24219

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGLEPTDKVLDIGCGVGRIAYPLTYYLKDGGGYEGFDISEKLIKWAKSEISLRFPNFNF
CCCCCCCCHHEECCCCCCHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHEEEECCCCCE
QVVDIHNKMYNPEGNVQTLDFVFPYQDKSFDWVVLTSVFTHLQAKEVRHYLDEITRVLKP
EEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
RGRCLCTCFLLNPESEAAMTKNKKARQIVHPLEECFTATPKIPESTIGYKEGLLLGWMQE
CCCEEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEHHHH
RGLSLAGKYYGHWCGRRKFTSHQDILVLQKS
CCCCCHHHHHHHHCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MVGLEPTDKVLDIGCGVGRIAYPLTYYLKDGGGYEGFDISEKLIKWAKSEISLRFPNFNF
CCCCCCCCHHEECCCCCCHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHEEEECCCCCE
QVVDIHNKMYNPEGNVQTLDFVFPYQDKSFDWVVLTSVFTHLQAKEVRHYLDEITRVLKP
EEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
RGRCLCTCFLLNPESEAAMTKNKKARQIVHPLEECFTATPKIPESTIGYKEGLLLGWMQE
CCCEEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEHHHH
RGLSLAGKYYGHWCGRRKFTSHQDILVLQKS
CCCCCHHHHHHHHCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]