Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475187

Identifier: 113475187

GI number: 113475187

Start: 2258640

End: 2260478

Strand: Reverse

Name: 113475187

Synonym: Tery_1487

Alternate gene names: NA

Gene position: 2260478-2258640 (Counterclockwise)

Preceding gene: 113475188

Following gene: 113475186

Centisome position: 29.17

GC content: 35.13

Gene sequence:

>1839_bases
ATGGGAATGAATGTATTTGTATTATGTACGCCTAGGTCTAGTTCTTACACTTTTGCTAAAGCTTGCACCTATATATCTAA
TTATAGAGTAGCCCATGAATCAAACAGTGGATTGTTAGGAAAAAAAAGGGTAGTATATCCAGAAAATCATATAGAAGTAG
ATAATCGTTTGGCTTGGTTTTTGGGTTATTTAGATGAGCTATATGGAGATAATGCTTTTTACGTTCATTTAATTAGAAAT
AAACAGAAAACTGCTATTAGTATTAACAAGCGATGGAATTTGCCAGCAAGTATTATTAATGCTTATGGACGAGCTATTTT
AGTGAGAGGCGATCGCCAACTTGAGAATGACCTAGAAGTTTGTGAAGATTATTATGAGACAGTAACAAAAAATATTCAAT
TATTTTTGAAAGACAAATCTCACAAAATTGTATTTAAGGTCGAAAATGCTCAAGAAAATTTTAGAGAGTTTTGGCAAAAA
ATAGGTGCTAAAGGTAATTTAGAATTAGCTTTAGAAACCTGGGATAGAAAACACAATGCTTCCCCCAAAAATCAAGATAG
TATTCAAGTAAGGAAAATGAAAGAAAAAGCTTTAGTAGAAATTAGTAATGTGAGCTTTGGGGCAAATTTTCCAGAGTTTA
TCCAACAAGAATTTAGAGGATGTAATATAGATTCACTAAAAAAAGGAGACCGTTTGAATACCTATTTTCTACCTATAATA
GGTTGGGTTCTAGGCCAAAAGTATCAGGTAGTTACAGTAGAAGTAGTCAGTGAGGGTATAGTTGTAGAAACAGTCCCAGT
GGATATAGCTCGTCCAGGAGTAAGCAAACAATTCCCCGAAATACCAGCAGCTAAAAATAGTGGTTTTAGCATCAGGGTAG
GACTACTGGGTCTGCCAATGGCATCTGAACTAACTTTACAAGCAGTTCTGGAAAATGGTAGTCGCTTTCCCTTGGGAAAT
ATCAAATTTCGACGCTTGCAGGGGTTAAAGTCTTGGTACAGTCCAAAGATACAACCTCTGGCTATATCATCTATTGGACC
TTCGGGTGCCGAACAGCTATTGCAACTTTTGGTGGGACATCCATCTCTGGTAGGAATAAGTGAGTCAACTAATGATACTC
CACCTAGTTATTATTGGTTAAAGTTGTTGGCTGAGTTATCGTCAGAAAATGGAATTTTTGATGCTAGTACTCAGAGAAAT
TTGAGGAGCAAGGAACAACGGTTCAAACTATCAAACTTATCTTTTTGGAGAGAGCAAACTTATCCAGAAAATTTAGGAAG
CTTCTGTCTGGAAAGTATTGATGGTTTCTATTCAAATGTTCAAGCTGAAGCATCAGAAATTACTTATTTTGTAGAAAGAT
ATGATATTTCCCGTCCTAAATTTTTAAATCTTTTATCCGAATTATATCCAGAGGGTAAGGAAATTATTTTGGTTCGTGAT
TTTCGAGATGTAGTTTACTCTATGCTACCTTTTAGCGGGCGTAAATGTGCGGGTTTTGATTCAAAAAAATTTAAGAGTTA
TCAACAGTTTGTCTATCATTTTGGCAAATATTCTGTTGGTAGTTTACTTGCCAGATGGAAGGAGCGATCGCCTCACATTT
ATTTTGTAAAATACGAGGATTTAATTTTATCTCCAGAACCAACTTTAAGGGGGATTTTGGAATATTTAAGTGTTAATAGT
TCTCAGGAAGTTATTAATACTATGTTGAAAAAAATAACAAAAAATAACTCGAAACCAGAGGCATTACTGGGAGACTGGCA
GTATGAAATGCCAGCTTCTTTGCAAGTTTTATGTAGCGAAGTATGCGAAGCAGCTTTGCAAGAATTTGGTTATAGCTAA

Upstream 100 bases:

>100_bases
TACCCCCCCCTTTTTTTAAGATGGGGATATTATTCTTGAGAACTGAATGTTTAGGAGTAAATTTTATTTTTTAGCTTGAC
AAATGAAGAGGAAAAAAATT

Downstream 100 bases:

>100_bases
GTTAATTAATGGATAAAGGAAATATAGTATAGTAATAATTTTGATATTTGGTATGATCAGGAGCAGAATAAATTAATGGT
AATTAGTTCTAATTTCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MGMNVFVLCTPRSSSYTFAKACTYISNYRVAHESNSGLLGKKRVVYPENHIEVDNRLAWFLGYLDELYGDNAFYVHLIRN
KQKTAISINKRWNLPASIINAYGRAILVRGDRQLENDLEVCEDYYETVTKNIQLFLKDKSHKIVFKVENAQENFREFWQK
IGAKGNLELALETWDRKHNASPKNQDSIQVRKMKEKALVEISNVSFGANFPEFIQQEFRGCNIDSLKKGDRLNTYFLPII
GWVLGQKYQVVTVEVVSEGIVVETVPVDIARPGVSKQFPEIPAAKNSGFSIRVGLLGLPMASELTLQAVLENGSRFPLGN
IKFRRLQGLKSWYSPKIQPLAISSIGPSGAEQLLQLLVGHPSLVGISESTNDTPPSYYWLKLLAELSSENGIFDASTQRN
LRSKEQRFKLSNLSFWREQTYPENLGSFCLESIDGFYSNVQAEASEITYFVERYDISRPKFLNLLSELYPEGKEIILVRD
FRDVVYSMLPFSGRKCAGFDSKKFKSYQQFVYHFGKYSVGSLLARWKERSPHIYFVKYEDLILSPEPTLRGILEYLSVNS
SQEVINTMLKKITKNNSKPEALLGDWQYEMPASLQVLCSEVCEAALQEFGYS

Sequences:

>Translated_612_residues
MGMNVFVLCTPRSSSYTFAKACTYISNYRVAHESNSGLLGKKRVVYPENHIEVDNRLAWFLGYLDELYGDNAFYVHLIRN
KQKTAISINKRWNLPASIINAYGRAILVRGDRQLENDLEVCEDYYETVTKNIQLFLKDKSHKIVFKVENAQENFREFWQK
IGAKGNLELALETWDRKHNASPKNQDSIQVRKMKEKALVEISNVSFGANFPEFIQQEFRGCNIDSLKKGDRLNTYFLPII
GWVLGQKYQVVTVEVVSEGIVVETVPVDIARPGVSKQFPEIPAAKNSGFSIRVGLLGLPMASELTLQAVLENGSRFPLGN
IKFRRLQGLKSWYSPKIQPLAISSIGPSGAEQLLQLLVGHPSLVGISESTNDTPPSYYWLKLLAELSSENGIFDASTQRN
LRSKEQRFKLSNLSFWREQTYPENLGSFCLESIDGFYSNVQAEASEITYFVERYDISRPKFLNLLSELYPEGKEIILVRD
FRDVVYSMLPFSGRKCAGFDSKKFKSYQQFVYHFGKYSVGSLLARWKERSPHIYFVKYEDLILSPEPTLRGILEYLSVNS
SQEVINTMLKKITKNNSKPEALLGDWQYEMPASLQVLCSEVCEAALQEFGYS
>Mature_611_residues
GMNVFVLCTPRSSSYTFAKACTYISNYRVAHESNSGLLGKKRVVYPENHIEVDNRLAWFLGYLDELYGDNAFYVHLIRNK
QKTAISINKRWNLPASIINAYGRAILVRGDRQLENDLEVCEDYYETVTKNIQLFLKDKSHKIVFKVENAQENFREFWQKI
GAKGNLELALETWDRKHNASPKNQDSIQVRKMKEKALVEISNVSFGANFPEFIQQEFRGCNIDSLKKGDRLNTYFLPIIG
WVLGQKYQVVTVEVVSEGIVVETVPVDIARPGVSKQFPEIPAAKNSGFSIRVGLLGLPMASELTLQAVLENGSRFPLGNI
KFRRLQGLKSWYSPKIQPLAISSIGPSGAEQLLQLLVGHPSLVGISESTNDTPPSYYWLKLLAELSSENGIFDASTQRNL
RSKEQRFKLSNLSFWREQTYPENLGSFCLESIDGFYSNVQAEASEITYFVERYDISRPKFLNLLSELYPEGKEIILVRDF
RDVVYSMLPFSGRKCAGFDSKKFKSYQQFVYHFGKYSVGSLLARWKERSPHIYFVKYEDLILSPEPTLRGILEYLSVNSS
QEVINTMLKKITKNNSKPEALLGDWQYEMPASLQVLCSEVCEAALQEFGYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69838; Mature: 69706

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMNVFVLCTPRSSSYTFAKACTYISNYRVAHESNSGLLGKKRVVYPENHIEVDNRLAWF
CCCEEEEEECCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHH
LGYLDELYGDNAFYVHLIRNKQKTAISINKRWNLPASIINAYGRAILVRGDRQLENDLEV
HHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHCCCEEEEECCHHHHHHHHH
CEDYYETVTKNIQLFLKDKSHKIVFKVENAQENFREFWQKIGAKGNLELALETWDRKHNA
HHHHHHHHHHCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
SPKNQDSIQVRKMKEKALVEISNVSFGANFPEFIQQEFRGCNIDSLKKGDRLNTYFLPII
CCCCCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCHHHHHH
GWVLGQKYQVVTVEVVSEGIVVETVPVDIARPGVSKQFPEIPAAKNSGFSIRVGLLGLPM
HHHHCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
ASELTLQAVLENGSRFPLGNIKFRRLQGLKSWYSPKIQPLAISSIGPSGAEQLLQLLVGH
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCC
PSLVGISESTNDTPPSYYWLKLLAELSSENGIFDASTQRNLRSKEQRFKLSNLSFWREQT
CCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCHHHHHCC
YPENLGSFCLESIDGFYSNVQAEASEITYFVERYDISRPKFLNLLSELYPEGKEIILVRD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEC
FRDVVYSMLPFSGRKCAGFDSKKFKSYQQFVYHFGKYSVGSLLARWKERSPHIYFVKYED
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEC
LILSPEPTLRGILEYLSVNSSQEVINTMLKKITKNNSKPEALLGDWQYEMPASLQVLCSE
EEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHH
VCEAALQEFGYS
HHHHHHHHCCCC
>Mature Secondary Structure 
GMNVFVLCTPRSSSYTFAKACTYISNYRVAHESNSGLLGKKRVVYPENHIEVDNRLAWF
CCEEEEEECCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHH
LGYLDELYGDNAFYVHLIRNKQKTAISINKRWNLPASIINAYGRAILVRGDRQLENDLEV
HHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHCCCEEEEECCHHHHHHHHH
CEDYYETVTKNIQLFLKDKSHKIVFKVENAQENFREFWQKIGAKGNLELALETWDRKHNA
HHHHHHHHHHCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
SPKNQDSIQVRKMKEKALVEISNVSFGANFPEFIQQEFRGCNIDSLKKGDRLNTYFLPII
CCCCCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCHHCCCCCCCCCHHHHHH
GWVLGQKYQVVTVEVVSEGIVVETVPVDIARPGVSKQFPEIPAAKNSGFSIRVGLLGLPM
HHHHCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
ASELTLQAVLENGSRFPLGNIKFRRLQGLKSWYSPKIQPLAISSIGPSGAEQLLQLLVGH
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCC
PSLVGISESTNDTPPSYYWLKLLAELSSENGIFDASTQRNLRSKEQRFKLSNLSFWREQT
CCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCHHHHHCC
YPENLGSFCLESIDGFYSNVQAEASEITYFVERYDISRPKFLNLLSELYPEGKEIILVRD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEC
FRDVVYSMLPFSGRKCAGFDSKKFKSYQQFVYHFGKYSVGSLLARWKERSPHIYFVKYED
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEC
LILSPEPTLRGILEYLSVNSSQEVINTMLKKITKNNSKPEALLGDWQYEMPASLQVLCSE
EEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHH
VCEAALQEFGYS
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA