Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475085

Identifier: 113475085

GI number: 113475085

Start: 2087004

End: 2089568

Strand: Reverse

Name: 113475085

Synonym: Tery_1361

Alternate gene names: NA

Gene position: 2089568-2087004 (Counterclockwise)

Preceding gene: 113475086

Following gene: 113475084

Centisome position: 26.96

GC content: 30.21

Gene sequence:

>2565_bases
ATGAACCCTGAAAAAATAGATTTCAATAACAAGTTAATTATAGATCAATTTATTCAAGACCAAACTAAAAAATCTGACAA
AATAAACGTGATAATTCATCCACAAGATGAAATGTATCTCTATGCTTTGAAAAATACAGACGGGAGGAAAGATGAAGCAT
TGCTACGATATTTTTCTAATGGAAAAAGAATTTTAGATGCAGTAAAACAAATTGTAGAATGGTATTTTGATGGATTTGAA
AATATATCCTCTTTTCTAGACTTTGCTAGTGGTTATGGTCGTTTTAGTAGGTTTTTGGTTCAAGAAATACCAAACAATAA
AATATGGGTTTCGGATATTTATCCCAAAGCAGTAGAATTTCAAAAACAACAGTTTGGTGTCGAAGGGATAGTTTCAACTA
ATTATCCAGAAAACTATCAAATAAATCAAAAATTTGACTGCATTTTTGCTTGTTCTTTTTTTAGTCACACTCCCCAAAAA
ACTTTTACTAGTTGGTTAGAAAAATTATATAGTAGCTTGACTGAAAATGGTATATTAATCTTCAGTACTCATGATTTATC
TTTAATGACTATAGAGGCAGACGTAGAAGCAGAAGAAATTTATTTTACTCCAGAAAGTGAAAGTCTTTTTCTGAAAACTG
AAGATTATGGAGTTACTTATGTGGGAGAAAAATGGGTAGCTAAAGTAATTCAAAAAGTTACTCAGGGAAAGGCAAAATGG
CATCGAATTCAAAGAGGTCTTTGTGGACATCATGACTTATATATTATCAGAAAGAAGGAAGCAAGAAGAAGTAATAAGGA
ACAAGTTGGGGAACAAATAGATGAATTATTAAACTTTCATTGTCATCCTGATGGAGGTTGCAAAAAAATTCAAATGACAG
TTACAGGAGATATTTATTTAGAGGGATGGGCAGCAGATATTAATCCAGAAGAAAAGGTAGAAAAAATATCATTTTTAATC
AATGGAAACGAAGTAGAAAGCTGTTACCCAAAGCCTGAAAATAAAACTCAAAAATATCAATGGTCATCTACTATTAATAC
TCAAAATTTATCAGCAAATGACATTATACTAGTTAAAATTATTAATAATTTTAATTTGGAGCGAGTAGTTAATATTTATC
CCGTTCATAACATCGCATTAATACCACCAAATGATCTATTACTAAGAATAAGTGGCAACCCGAGTATCAAAGCTTTTATT
AGTTCATTTGATGACCTAAGATATACCGTAAAAAGTTATCTTCAAACCGCAGGATTTAATTTTAATCAATTTGAGAAAAT
ACTAGATTTTGGTTGTGGGGTAGGGCGTTACTTAATGGCATTTGAACCTGAACTTTCCCCTAATCAAAAACTATTTGGTT
GTGACGTTTTTGCCGAATGTGCTGAATGGTGTCAAGAAAATATTAAATTTGCCACTGTCAAAAATAACGATATTCAGCCA
CCGTTACCTTTTGAAAATAATCAGTTTGATTTAATTAATGCTATCTCAGTATTTACTCATCTAAGTTTAGATTTACAACA
TCTTTGGGCGTGGGATATTTATCGAGTTTTACGACCAGGTGGAATATTATTTATGACTCTTCACGGACCTCAATTTTTCC
CCATAGTTTATGATGTTTTTCGCAGTGGAAATTCTCATATAGCAGAAATGTATAGTATTGGTGAAGAGGGATTATTTTTA
TATCTTGACCATCAAGGAGAAACAGATGGTCAAGGTCAACATACTATTGCAGCAGTTCATACACCAACAGCTTACCAGGA
AATATTTTCTATGTTTAAACACATTAAAAGATTTCCTCAAAGTAATTTAGCAAATGGTCAAGATTTATATATTTTACAAA
AACCAATTTCTGGAAGTTTAGTTGCTCAACCTATTAATATTAAGTCAGAAGTAAGAAGTCAGAAATCAGACATTAATAAT
TTTAGTAAAAAGAAAGATGCGGAAAATATTACCAAAAAAATAACAGGAGATATCAATTTAGAACTCCTAAATAATAATTT
AGAAATTAATAATTTTCTAAAGACAGAAAATGTGGGAAATGCTACGGAAGAAATAGTAGGAAAAGAGATAGAAGTAGAAA
AAATACTCATATCTGATAATGGAGAAGGTGAAAATTTGTCAGAGAAAATATTGTCTGATAGTCAAACAAAGGAGCAACTA
ACAACACAAGTAGGAAACATACCTTTATCTAATGATGTAAAAACTGGAAATTTATCTGAAAAAGTATTCTGTGAGAGTCA
TCAATATCATACTGAGATGAAATTTCAAATAGAAGGTCAAAAAGTATTTAGAGCTTATCCACAAATAGAACCGTTAGGTA
CTTATTCTATTGGCTGTAAAATTGAGATTGTTAATAACAAAAATGGAGAAATTTTAGTACAAAAAACTCTGCCACTAAAC
AATAAAAATATATTTGGTAAAACTAATTATGGTTTGATAGAAATAGAAATTCCTGAATATTCAGGAGAAGTAATTGTCAG
ATTAAAAACTGTAATTACTGATAGAATCACTTTACCACCAGAACAAGAAGTATTAGTATCTTGGAATTTTGCAAACTTTG
CTTAA

Upstream 100 bases:

>100_bases
TTTTTTTAAATTGTACTACCTCTTTCTTAAACCTTAACCTTGATTGTTAGATATTTTATATGGTAAAAAAAACGAGAGAA
ACAAATTAAAATATAAAAAT

Downstream 100 bases:

>100_bases
TATTAAGGAGGAAAATTAGATGAAAACAACAGCTTTGATTATTGCCGGAATGCACCGTTCAGGAACCTCCTTAACTGCTT
CTTTATTTCAAAGTTTAGGA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: Methyltransferase

Number of amino acids: Translated: 854; Mature: 854

Protein sequence:

>854_residues
MNPEKIDFNNKLIIDQFIQDQTKKSDKINVIIHPQDEMYLYALKNTDGRKDEALLRYFSNGKRILDAVKQIVEWYFDGFE
NISSFLDFASGYGRFSRFLVQEIPNNKIWVSDIYPKAVEFQKQQFGVEGIVSTNYPENYQINQKFDCIFACSFFSHTPQK
TFTSWLEKLYSSLTENGILIFSTHDLSLMTIEADVEAEEIYFTPESESLFLKTEDYGVTYVGEKWVAKVIQKVTQGKAKW
HRIQRGLCGHHDLYIIRKKEARRSNKEQVGEQIDELLNFHCHPDGGCKKIQMTVTGDIYLEGWAADINPEEKVEKISFLI
NGNEVESCYPKPENKTQKYQWSSTINTQNLSANDIILVKIINNFNLERVVNIYPVHNIALIPPNDLLLRISGNPSIKAFI
SSFDDLRYTVKSYLQTAGFNFNQFEKILDFGCGVGRYLMAFEPELSPNQKLFGCDVFAECAEWCQENIKFATVKNNDIQP
PLPFENNQFDLINAISVFTHLSLDLQHLWAWDIYRVLRPGGILFMTLHGPQFFPIVYDVFRSGNSHIAEMYSIGEEGLFL
YLDHQGETDGQGQHTIAAVHTPTAYQEIFSMFKHIKRFPQSNLANGQDLYILQKPISGSLVAQPINIKSEVRSQKSDINN
FSKKKDAENITKKITGDINLELLNNNLEINNFLKTENVGNATEEIVGKEIEVEKILISDNGEGENLSEKILSDSQTKEQL
TTQVGNIPLSNDVKTGNLSEKVFCESHQYHTEMKFQIEGQKVFRAYPQIEPLGTYSIGCKIEIVNNKNGEILVQKTLPLN
NKNIFGKTNYGLIEIEIPEYSGEVIVRLKTVITDRITLPPEQEVLVSWNFANFA

Sequences:

>Translated_854_residues
MNPEKIDFNNKLIIDQFIQDQTKKSDKINVIIHPQDEMYLYALKNTDGRKDEALLRYFSNGKRILDAVKQIVEWYFDGFE
NISSFLDFASGYGRFSRFLVQEIPNNKIWVSDIYPKAVEFQKQQFGVEGIVSTNYPENYQINQKFDCIFACSFFSHTPQK
TFTSWLEKLYSSLTENGILIFSTHDLSLMTIEADVEAEEIYFTPESESLFLKTEDYGVTYVGEKWVAKVIQKVTQGKAKW
HRIQRGLCGHHDLYIIRKKEARRSNKEQVGEQIDELLNFHCHPDGGCKKIQMTVTGDIYLEGWAADINPEEKVEKISFLI
NGNEVESCYPKPENKTQKYQWSSTINTQNLSANDIILVKIINNFNLERVVNIYPVHNIALIPPNDLLLRISGNPSIKAFI
SSFDDLRYTVKSYLQTAGFNFNQFEKILDFGCGVGRYLMAFEPELSPNQKLFGCDVFAECAEWCQENIKFATVKNNDIQP
PLPFENNQFDLINAISVFTHLSLDLQHLWAWDIYRVLRPGGILFMTLHGPQFFPIVYDVFRSGNSHIAEMYSIGEEGLFL
YLDHQGETDGQGQHTIAAVHTPTAYQEIFSMFKHIKRFPQSNLANGQDLYILQKPISGSLVAQPINIKSEVRSQKSDINN
FSKKKDAENITKKITGDINLELLNNNLEINNFLKTENVGNATEEIVGKEIEVEKILISDNGEGENLSEKILSDSQTKEQL
TTQVGNIPLSNDVKTGNLSEKVFCESHQYHTEMKFQIEGQKVFRAYPQIEPLGTYSIGCKIEIVNNKNGEILVQKTLPLN
NKNIFGKTNYGLIEIEIPEYSGEVIVRLKTVITDRITLPPEQEVLVSWNFANFA
>Mature_854_residues
MNPEKIDFNNKLIIDQFIQDQTKKSDKINVIIHPQDEMYLYALKNTDGRKDEALLRYFSNGKRILDAVKQIVEWYFDGFE
NISSFLDFASGYGRFSRFLVQEIPNNKIWVSDIYPKAVEFQKQQFGVEGIVSTNYPENYQINQKFDCIFACSFFSHTPQK
TFTSWLEKLYSSLTENGILIFSTHDLSLMTIEADVEAEEIYFTPESESLFLKTEDYGVTYVGEKWVAKVIQKVTQGKAKW
HRIQRGLCGHHDLYIIRKKEARRSNKEQVGEQIDELLNFHCHPDGGCKKIQMTVTGDIYLEGWAADINPEEKVEKISFLI
NGNEVESCYPKPENKTQKYQWSSTINTQNLSANDIILVKIINNFNLERVVNIYPVHNIALIPPNDLLLRISGNPSIKAFI
SSFDDLRYTVKSYLQTAGFNFNQFEKILDFGCGVGRYLMAFEPELSPNQKLFGCDVFAECAEWCQENIKFATVKNNDIQP
PLPFENNQFDLINAISVFTHLSLDLQHLWAWDIYRVLRPGGILFMTLHGPQFFPIVYDVFRSGNSHIAEMYSIGEEGLFL
YLDHQGETDGQGQHTIAAVHTPTAYQEIFSMFKHIKRFPQSNLANGQDLYILQKPISGSLVAQPINIKSEVRSQKSDINN
FSKKKDAENITKKITGDINLELLNNNLEINNFLKTENVGNATEEIVGKEIEVEKILISDNGEGENLSEKILSDSQTKEQL
TTQVGNIPLSNDVKTGNLSEKVFCESHQYHTEMKFQIEGQKVFRAYPQIEPLGTYSIGCKIEIVNNKNGEILVQKTLPLN
NKNIFGKTNYGLIEIEIPEYSGEVIVRLKTVITDRITLPPEQEVLVSWNFANFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97796; Mature: 97796

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPEKIDFNNKLIIDQFIQDQTKKSDKINVIIHPQDEMYLYALKNTDGRKDEALLRYFSN
CCCCEECCCCEEEHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHC
GKRILDAVKQIVEWYFDGFENISSFLDFASGYGRFSRFLVQEIPNNKIWVSDIYPKAVEF
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
QKQQFGVEGIVSTNYPENYQINQKFDCIFACSFFSHTPQKTFTSWLEKLYSSLTENGILI
HHHHCCCCEEEECCCCCCEEECCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCEEE
FSTHDLSLMTIEADVEAEEIYFTPESESLFLKTEDYGVTYVGEKWVAKVIQKVTQGKAKW
EEECCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEECHHHHHHHHHHHHCCHHHH
HRIQRGLCGHHDLYIIRKKEARRSNKEQVGEQIDELLNFHCHPDGGCKKIQMTVTGDIYL
HHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHCEECCCCCCCEEEEEEEEEEEEE
EGWAADINPEEKVEKISFLINGNEVESCYPKPENKTQKYQWSSTINTQNLSANDIILVKI
EEEECCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEE
INNFNLERVVNIYPVHNIALIPPNDLLLRISGNPSIKAFISSFDDLRYTVKSYLQTAGFN
ECCCCCEEEEEEEEECEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
FNQFEKILDFGCGVGRYLMAFEPELSPNQKLFGCDVFAECAEWCQENIKFATVKNNDIQP
HHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCEEEEEECCCCCC
PLPFENNQFDLINAISVFTHLSLDLQHLWAWDIYRVLRPGGILFMTLHGPQFFPIVYDVF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
RSGNSHIAEMYSIGEEGLFLYLDHQGETDGQGQHTIAAVHTPTAYQEIFSMFKHIKRFPQ
HCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCC
SNLANGQDLYILQKPISGSLVAQPINIKSEVRSQKSDINNFSKKKDAENITKKITGDINL
CCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
ELLNNNLEINNFLKTENVGNATEEIVGKEIEVEKILISDNGEGENLSEKILSDSQTKEQL
EEECCCCEECCEEECCCCCCHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHCCCHHHHHH
TTQVGNIPLSNDVKTGNLSEKVFCESHQYHTEMKFQIEGQKVFRAYPQIEPLGTYSIGCK
HHHHCCCCCCCCCCCCCCCHHEEECCCCCCCEEEEEECCHHHHHHCCCCCCCCEEEEEEE
IEIVNNKNGEILVQKTLPLNNKNIFGKTNYGLIEIEIPEYSGEVIVRLKTVITDRITLPP
EEEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEHHHCCCCCCC
EQEVLVSWNFANFA
CCCEEEEECCCCCC
>Mature Secondary Structure
MNPEKIDFNNKLIIDQFIQDQTKKSDKINVIIHPQDEMYLYALKNTDGRKDEALLRYFSN
CCCCEECCCCEEEHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHC
GKRILDAVKQIVEWYFDGFENISSFLDFASGYGRFSRFLVQEIPNNKIWVSDIYPKAVEF
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
QKQQFGVEGIVSTNYPENYQINQKFDCIFACSFFSHTPQKTFTSWLEKLYSSLTENGILI
HHHHCCCCEEEECCCCCCEEECCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCEEE
FSTHDLSLMTIEADVEAEEIYFTPESESLFLKTEDYGVTYVGEKWVAKVIQKVTQGKAKW
EEECCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEECHHHHHHHHHHHHCCHHHH
HRIQRGLCGHHDLYIIRKKEARRSNKEQVGEQIDELLNFHCHPDGGCKKIQMTVTGDIYL
HHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHCEECCCCCCCEEEEEEEEEEEEE
EGWAADINPEEKVEKISFLINGNEVESCYPKPENKTQKYQWSSTINTQNLSANDIILVKI
EEEECCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEE
INNFNLERVVNIYPVHNIALIPPNDLLLRISGNPSIKAFISSFDDLRYTVKSYLQTAGFN
ECCCCCEEEEEEEEECEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
FNQFEKILDFGCGVGRYLMAFEPELSPNQKLFGCDVFAECAEWCQENIKFATVKNNDIQP
HHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCEEEEEECCCCCC
PLPFENNQFDLINAISVFTHLSLDLQHLWAWDIYRVLRPGGILFMTLHGPQFFPIVYDVF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
RSGNSHIAEMYSIGEEGLFLYLDHQGETDGQGQHTIAAVHTPTAYQEIFSMFKHIKRFPQ
HCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCC
SNLANGQDLYILQKPISGSLVAQPINIKSEVRSQKSDINNFSKKKDAENITKKITGDINL
CCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
ELLNNNLEINNFLKTENVGNATEEIVGKEIEVEKILISDNGEGENLSEKILSDSQTKEQL
EEECCCCEECCEEECCCCCCHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHCCCHHHHHH
TTQVGNIPLSNDVKTGNLSEKVFCESHQYHTEMKFQIEGQKVFRAYPQIEPLGTYSIGCK
HHHHCCCCCCCCCCCCCCCHHEEECCCCCCCEEEEEECCHHHHHHCCCCCCCCEEEEEEE
IEIVNNKNGEILVQKTLPLNNKNIFGKTNYGLIEIEIPEYSGEVIVRLKTVITDRITLPP
EEEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEHHHCCCCCCC
EQEVLVSWNFANFA
CCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA