| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475085
Identifier: 113475085
GI number: 113475085
Start: 2087004
End: 2089568
Strand: Reverse
Name: 113475085
Synonym: Tery_1361
Alternate gene names: NA
Gene position: 2089568-2087004 (Counterclockwise)
Preceding gene: 113475086
Following gene: 113475084
Centisome position: 26.96
GC content: 30.21
Gene sequence:
>2565_bases ATGAACCCTGAAAAAATAGATTTCAATAACAAGTTAATTATAGATCAATTTATTCAAGACCAAACTAAAAAATCTGACAA AATAAACGTGATAATTCATCCACAAGATGAAATGTATCTCTATGCTTTGAAAAATACAGACGGGAGGAAAGATGAAGCAT TGCTACGATATTTTTCTAATGGAAAAAGAATTTTAGATGCAGTAAAACAAATTGTAGAATGGTATTTTGATGGATTTGAA AATATATCCTCTTTTCTAGACTTTGCTAGTGGTTATGGTCGTTTTAGTAGGTTTTTGGTTCAAGAAATACCAAACAATAA AATATGGGTTTCGGATATTTATCCCAAAGCAGTAGAATTTCAAAAACAACAGTTTGGTGTCGAAGGGATAGTTTCAACTA ATTATCCAGAAAACTATCAAATAAATCAAAAATTTGACTGCATTTTTGCTTGTTCTTTTTTTAGTCACACTCCCCAAAAA ACTTTTACTAGTTGGTTAGAAAAATTATATAGTAGCTTGACTGAAAATGGTATATTAATCTTCAGTACTCATGATTTATC TTTAATGACTATAGAGGCAGACGTAGAAGCAGAAGAAATTTATTTTACTCCAGAAAGTGAAAGTCTTTTTCTGAAAACTG AAGATTATGGAGTTACTTATGTGGGAGAAAAATGGGTAGCTAAAGTAATTCAAAAAGTTACTCAGGGAAAGGCAAAATGG CATCGAATTCAAAGAGGTCTTTGTGGACATCATGACTTATATATTATCAGAAAGAAGGAAGCAAGAAGAAGTAATAAGGA ACAAGTTGGGGAACAAATAGATGAATTATTAAACTTTCATTGTCATCCTGATGGAGGTTGCAAAAAAATTCAAATGACAG TTACAGGAGATATTTATTTAGAGGGATGGGCAGCAGATATTAATCCAGAAGAAAAGGTAGAAAAAATATCATTTTTAATC AATGGAAACGAAGTAGAAAGCTGTTACCCAAAGCCTGAAAATAAAACTCAAAAATATCAATGGTCATCTACTATTAATAC TCAAAATTTATCAGCAAATGACATTATACTAGTTAAAATTATTAATAATTTTAATTTGGAGCGAGTAGTTAATATTTATC CCGTTCATAACATCGCATTAATACCACCAAATGATCTATTACTAAGAATAAGTGGCAACCCGAGTATCAAAGCTTTTATT AGTTCATTTGATGACCTAAGATATACCGTAAAAAGTTATCTTCAAACCGCAGGATTTAATTTTAATCAATTTGAGAAAAT ACTAGATTTTGGTTGTGGGGTAGGGCGTTACTTAATGGCATTTGAACCTGAACTTTCCCCTAATCAAAAACTATTTGGTT GTGACGTTTTTGCCGAATGTGCTGAATGGTGTCAAGAAAATATTAAATTTGCCACTGTCAAAAATAACGATATTCAGCCA CCGTTACCTTTTGAAAATAATCAGTTTGATTTAATTAATGCTATCTCAGTATTTACTCATCTAAGTTTAGATTTACAACA TCTTTGGGCGTGGGATATTTATCGAGTTTTACGACCAGGTGGAATATTATTTATGACTCTTCACGGACCTCAATTTTTCC CCATAGTTTATGATGTTTTTCGCAGTGGAAATTCTCATATAGCAGAAATGTATAGTATTGGTGAAGAGGGATTATTTTTA TATCTTGACCATCAAGGAGAAACAGATGGTCAAGGTCAACATACTATTGCAGCAGTTCATACACCAACAGCTTACCAGGA AATATTTTCTATGTTTAAACACATTAAAAGATTTCCTCAAAGTAATTTAGCAAATGGTCAAGATTTATATATTTTACAAA AACCAATTTCTGGAAGTTTAGTTGCTCAACCTATTAATATTAAGTCAGAAGTAAGAAGTCAGAAATCAGACATTAATAAT TTTAGTAAAAAGAAAGATGCGGAAAATATTACCAAAAAAATAACAGGAGATATCAATTTAGAACTCCTAAATAATAATTT AGAAATTAATAATTTTCTAAAGACAGAAAATGTGGGAAATGCTACGGAAGAAATAGTAGGAAAAGAGATAGAAGTAGAAA AAATACTCATATCTGATAATGGAGAAGGTGAAAATTTGTCAGAGAAAATATTGTCTGATAGTCAAACAAAGGAGCAACTA ACAACACAAGTAGGAAACATACCTTTATCTAATGATGTAAAAACTGGAAATTTATCTGAAAAAGTATTCTGTGAGAGTCA TCAATATCATACTGAGATGAAATTTCAAATAGAAGGTCAAAAAGTATTTAGAGCTTATCCACAAATAGAACCGTTAGGTA CTTATTCTATTGGCTGTAAAATTGAGATTGTTAATAACAAAAATGGAGAAATTTTAGTACAAAAAACTCTGCCACTAAAC AATAAAAATATATTTGGTAAAACTAATTATGGTTTGATAGAAATAGAAATTCCTGAATATTCAGGAGAAGTAATTGTCAG ATTAAAAACTGTAATTACTGATAGAATCACTTTACCACCAGAACAAGAAGTATTAGTATCTTGGAATTTTGCAAACTTTG CTTAA
Upstream 100 bases:
>100_bases TTTTTTTAAATTGTACTACCTCTTTCTTAAACCTTAACCTTGATTGTTAGATATTTTATATGGTAAAAAAAACGAGAGAA ACAAATTAAAATATAAAAAT
Downstream 100 bases:
>100_bases TATTAAGGAGGAAAATTAGATGAAAACAACAGCTTTGATTATTGCCGGAATGCACCGTTCAGGAACCTCCTTAACTGCTT CTTTATTTCAAAGTTTAGGA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase
Number of amino acids: Translated: 854; Mature: 854
Protein sequence:
>854_residues MNPEKIDFNNKLIIDQFIQDQTKKSDKINVIIHPQDEMYLYALKNTDGRKDEALLRYFSNGKRILDAVKQIVEWYFDGFE NISSFLDFASGYGRFSRFLVQEIPNNKIWVSDIYPKAVEFQKQQFGVEGIVSTNYPENYQINQKFDCIFACSFFSHTPQK TFTSWLEKLYSSLTENGILIFSTHDLSLMTIEADVEAEEIYFTPESESLFLKTEDYGVTYVGEKWVAKVIQKVTQGKAKW HRIQRGLCGHHDLYIIRKKEARRSNKEQVGEQIDELLNFHCHPDGGCKKIQMTVTGDIYLEGWAADINPEEKVEKISFLI NGNEVESCYPKPENKTQKYQWSSTINTQNLSANDIILVKIINNFNLERVVNIYPVHNIALIPPNDLLLRISGNPSIKAFI SSFDDLRYTVKSYLQTAGFNFNQFEKILDFGCGVGRYLMAFEPELSPNQKLFGCDVFAECAEWCQENIKFATVKNNDIQP PLPFENNQFDLINAISVFTHLSLDLQHLWAWDIYRVLRPGGILFMTLHGPQFFPIVYDVFRSGNSHIAEMYSIGEEGLFL YLDHQGETDGQGQHTIAAVHTPTAYQEIFSMFKHIKRFPQSNLANGQDLYILQKPISGSLVAQPINIKSEVRSQKSDINN FSKKKDAENITKKITGDINLELLNNNLEINNFLKTENVGNATEEIVGKEIEVEKILISDNGEGENLSEKILSDSQTKEQL TTQVGNIPLSNDVKTGNLSEKVFCESHQYHTEMKFQIEGQKVFRAYPQIEPLGTYSIGCKIEIVNNKNGEILVQKTLPLN NKNIFGKTNYGLIEIEIPEYSGEVIVRLKTVITDRITLPPEQEVLVSWNFANFA
Sequences:
>Translated_854_residues MNPEKIDFNNKLIIDQFIQDQTKKSDKINVIIHPQDEMYLYALKNTDGRKDEALLRYFSNGKRILDAVKQIVEWYFDGFE NISSFLDFASGYGRFSRFLVQEIPNNKIWVSDIYPKAVEFQKQQFGVEGIVSTNYPENYQINQKFDCIFACSFFSHTPQK TFTSWLEKLYSSLTENGILIFSTHDLSLMTIEADVEAEEIYFTPESESLFLKTEDYGVTYVGEKWVAKVIQKVTQGKAKW HRIQRGLCGHHDLYIIRKKEARRSNKEQVGEQIDELLNFHCHPDGGCKKIQMTVTGDIYLEGWAADINPEEKVEKISFLI NGNEVESCYPKPENKTQKYQWSSTINTQNLSANDIILVKIINNFNLERVVNIYPVHNIALIPPNDLLLRISGNPSIKAFI SSFDDLRYTVKSYLQTAGFNFNQFEKILDFGCGVGRYLMAFEPELSPNQKLFGCDVFAECAEWCQENIKFATVKNNDIQP PLPFENNQFDLINAISVFTHLSLDLQHLWAWDIYRVLRPGGILFMTLHGPQFFPIVYDVFRSGNSHIAEMYSIGEEGLFL YLDHQGETDGQGQHTIAAVHTPTAYQEIFSMFKHIKRFPQSNLANGQDLYILQKPISGSLVAQPINIKSEVRSQKSDINN FSKKKDAENITKKITGDINLELLNNNLEINNFLKTENVGNATEEIVGKEIEVEKILISDNGEGENLSEKILSDSQTKEQL TTQVGNIPLSNDVKTGNLSEKVFCESHQYHTEMKFQIEGQKVFRAYPQIEPLGTYSIGCKIEIVNNKNGEILVQKTLPLN NKNIFGKTNYGLIEIEIPEYSGEVIVRLKTVITDRITLPPEQEVLVSWNFANFA >Mature_854_residues MNPEKIDFNNKLIIDQFIQDQTKKSDKINVIIHPQDEMYLYALKNTDGRKDEALLRYFSNGKRILDAVKQIVEWYFDGFE NISSFLDFASGYGRFSRFLVQEIPNNKIWVSDIYPKAVEFQKQQFGVEGIVSTNYPENYQINQKFDCIFACSFFSHTPQK TFTSWLEKLYSSLTENGILIFSTHDLSLMTIEADVEAEEIYFTPESESLFLKTEDYGVTYVGEKWVAKVIQKVTQGKAKW HRIQRGLCGHHDLYIIRKKEARRSNKEQVGEQIDELLNFHCHPDGGCKKIQMTVTGDIYLEGWAADINPEEKVEKISFLI NGNEVESCYPKPENKTQKYQWSSTINTQNLSANDIILVKIINNFNLERVVNIYPVHNIALIPPNDLLLRISGNPSIKAFI SSFDDLRYTVKSYLQTAGFNFNQFEKILDFGCGVGRYLMAFEPELSPNQKLFGCDVFAECAEWCQENIKFATVKNNDIQP PLPFENNQFDLINAISVFTHLSLDLQHLWAWDIYRVLRPGGILFMTLHGPQFFPIVYDVFRSGNSHIAEMYSIGEEGLFL YLDHQGETDGQGQHTIAAVHTPTAYQEIFSMFKHIKRFPQSNLANGQDLYILQKPISGSLVAQPINIKSEVRSQKSDINN FSKKKDAENITKKITGDINLELLNNNLEINNFLKTENVGNATEEIVGKEIEVEKILISDNGEGENLSEKILSDSQTKEQL TTQVGNIPLSNDVKTGNLSEKVFCESHQYHTEMKFQIEGQKVFRAYPQIEPLGTYSIGCKIEIVNNKNGEILVQKTLPLN NKNIFGKTNYGLIEIEIPEYSGEVIVRLKTVITDRITLPPEQEVLVSWNFANFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97796; Mature: 97796
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPEKIDFNNKLIIDQFIQDQTKKSDKINVIIHPQDEMYLYALKNTDGRKDEALLRYFSN CCCCEECCCCEEEHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHC GKRILDAVKQIVEWYFDGFENISSFLDFASGYGRFSRFLVQEIPNNKIWVSDIYPKAVEF CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH QKQQFGVEGIVSTNYPENYQINQKFDCIFACSFFSHTPQKTFTSWLEKLYSSLTENGILI HHHHCCCCEEEECCCCCCEEECCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCEEE FSTHDLSLMTIEADVEAEEIYFTPESESLFLKTEDYGVTYVGEKWVAKVIQKVTQGKAKW EEECCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEECHHHHHHHHHHHHCCHHHH HRIQRGLCGHHDLYIIRKKEARRSNKEQVGEQIDELLNFHCHPDGGCKKIQMTVTGDIYL HHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHCEECCCCCCCEEEEEEEEEEEEE EGWAADINPEEKVEKISFLINGNEVESCYPKPENKTQKYQWSSTINTQNLSANDIILVKI EEEECCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEE INNFNLERVVNIYPVHNIALIPPNDLLLRISGNPSIKAFISSFDDLRYTVKSYLQTAGFN ECCCCCEEEEEEEEECEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC FNQFEKILDFGCGVGRYLMAFEPELSPNQKLFGCDVFAECAEWCQENIKFATVKNNDIQP HHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCEEEEEECCCCCC PLPFENNQFDLINAISVFTHLSLDLQHLWAWDIYRVLRPGGILFMTLHGPQFFPIVYDVF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH RSGNSHIAEMYSIGEEGLFLYLDHQGETDGQGQHTIAAVHTPTAYQEIFSMFKHIKRFPQ HCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCC SNLANGQDLYILQKPISGSLVAQPINIKSEVRSQKSDINNFSKKKDAENITKKITGDINL CCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ELLNNNLEINNFLKTENVGNATEEIVGKEIEVEKILISDNGEGENLSEKILSDSQTKEQL EEECCCCEECCEEECCCCCCHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHCCCHHHHHH TTQVGNIPLSNDVKTGNLSEKVFCESHQYHTEMKFQIEGQKVFRAYPQIEPLGTYSIGCK HHHHCCCCCCCCCCCCCCCHHEEECCCCCCCEEEEEECCHHHHHHCCCCCCCCEEEEEEE IEIVNNKNGEILVQKTLPLNNKNIFGKTNYGLIEIEIPEYSGEVIVRLKTVITDRITLPP EEEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEHHHCCCCCCC EQEVLVSWNFANFA CCCEEEEECCCCCC >Mature Secondary Structure MNPEKIDFNNKLIIDQFIQDQTKKSDKINVIIHPQDEMYLYALKNTDGRKDEALLRYFSN CCCCEECCCCEEEHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHC GKRILDAVKQIVEWYFDGFENISSFLDFASGYGRFSRFLVQEIPNNKIWVSDIYPKAVEF CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH QKQQFGVEGIVSTNYPENYQINQKFDCIFACSFFSHTPQKTFTSWLEKLYSSLTENGILI HHHHCCCCEEEECCCCCCEEECCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCEEE FSTHDLSLMTIEADVEAEEIYFTPESESLFLKTEDYGVTYVGEKWVAKVIQKVTQGKAKW EEECCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEECHHHHHHHHHHHHCCHHHH HRIQRGLCGHHDLYIIRKKEARRSNKEQVGEQIDELLNFHCHPDGGCKKIQMTVTGDIYL HHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHCEECCCCCCCEEEEEEEEEEEEE EGWAADINPEEKVEKISFLINGNEVESCYPKPENKTQKYQWSSTINTQNLSANDIILVKI EEEECCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEE INNFNLERVVNIYPVHNIALIPPNDLLLRISGNPSIKAFISSFDDLRYTVKSYLQTAGFN ECCCCCEEEEEEEEECEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC FNQFEKILDFGCGVGRYLMAFEPELSPNQKLFGCDVFAECAEWCQENIKFATVKNNDIQP HHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCEEEEEECCCCCC PLPFENNQFDLINAISVFTHLSLDLQHLWAWDIYRVLRPGGILFMTLHGPQFFPIVYDVF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH RSGNSHIAEMYSIGEEGLFLYLDHQGETDGQGQHTIAAVHTPTAYQEIFSMFKHIKRFPQ HCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCC SNLANGQDLYILQKPISGSLVAQPINIKSEVRSQKSDINNFSKKKDAENITKKITGDINL CCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ELLNNNLEINNFLKTENVGNATEEIVGKEIEVEKILISDNGEGENLSEKILSDSQTKEQL EEECCCCEECCEEECCCCCCHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHCCCHHHHHH TTQVGNIPLSNDVKTGNLSEKVFCESHQYHTEMKFQIEGQKVFRAYPQIEPLGTYSIGCK HHHHCCCCCCCCCCCCCCCHHEEECCCCCCCEEEEEECCHHHHHHCCCCCCCCEEEEEEE IEIVNNKNGEILVQKTLPLNNKNIFGKTNYGLIEIEIPEYSGEVIVRLKTVITDRITLPP EEEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEHHHCCCCCCC EQEVLVSWNFANFA CCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA