Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475079

Identifier: 113475079

GI number: 113475079

Start: 2071942

End: 2072889

Strand: Direct

Name: 113475079

Synonym: Tery_1354

Alternate gene names: NA

Gene position: 2071942-2072889 (Clockwise)

Preceding gene: 113475066

Following gene: 113475089

Centisome position: 26.73

GC content: 33.33

Gene sequence:

>948_bases
ATGCGAATATTATTTACAATTCCTCATTTTTTCAACCCAGAAGGTAGCGGGCAACATGGTTCTTTACGAAAAGACCCACA
AACGCGCAGAATAGCTATTACTACCTGTTTAACTGCATTAAAAGCCTTATATGGTCAATCTCAGTATATGATTGATATTA
GCAGACACCAAGCTATTCCTGCTAATCAAAGCCATGGAAATAATGTGGATATTATTGTTTGTACAACTAAAGGTTTTCAC
TTATTATCTCAGATTCCTTTGGCGTCAAATTTCTTAATGCACCACAATACTAATGTAGAACCTATGTTATTAGGATTTGA
ATGTCAGGCAGTACTGAAATCATGTCTGGGAAAGTATGATTATTATTGTTATTTAGAAGACGATTTAATTCTACATGACC
CTTGGTTCTTTGTGAAGTTAAAATGGTTTAATCACCATACTGGAAATAGTAATTTACTACAACCTAATCGTTATGAAGTG
TCACCTTTGGGGCCTGTGCCAAAAGCTTATATAGATGGTAATTTAAAACCTGAAACAACAGCTAAGTTTCAAAATATTCG
AGATCAACCTCAACTTAAGGGGAAAATAATGGAGAAAGTGATTGCTTTTCACAGAACTCTTAACCCTCATTCTGGTTGTT
ATTTTTTGAATTCTGAACAAATGGCAGAATGGGTTAGTAAACCATATTTTGGGGATAGAGATACTAGTTTTATTGGTCCT
TTAGAAAGTGCTGCGACTCTAGGAATTATGAGGAGTTTTAGAATTTATAAACCTGCTATTGCTGATGCTAGTTTCTTGGA
AATTCAGCATTTTGGTACTACGTTTCTTAGTTTAATTGGTAATCAAATATCACTCTGGGATAAACTTATTCAGGGTAAAG
AAAAAACTAAGACTGAAGCTAAAAATAAAGTCAACAAAGAAGTTAAAACAGAAACTAAAACTAATTAA

Upstream 100 bases:

>100_bases
TGTGTTTTTCTTGCATAAAAATGTATAAAAACAATATAAAAATTGTGGATTTTGTTGTTCCCTATTTCTGATTTACTAAT
TGATTCAATAAAAAGCAAAA

Downstream 100 bases:

>100_bases
TATTAAATATTTAACTATGAACTTTGAGGGAGAAAAGAAGACTCATCCAACCTAGCAAATTTTTGTGAACTAATAAGGAG
TAAAAGGGTAGCAATTAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRILFTIPHFFNPEGSGQHGSLRKDPQTRRIAITTCLTALKALYGQSQYMIDISRHQAIPANQSHGNNVDIIVCTTKGFH
LLSQIPLASNFLMHHNTNVEPMLLGFECQAVLKSCLGKYDYYCYLEDDLILHDPWFFVKLKWFNHHTGNSNLLQPNRYEV
SPLGPVPKAYIDGNLKPETTAKFQNIRDQPQLKGKIMEKVIAFHRTLNPHSGCYFLNSEQMAEWVSKPYFGDRDTSFIGP
LESAATLGIMRSFRIYKPAIADASFLEIQHFGTTFLSLIGNQISLWDKLIQGKEKTKTEAKNKVNKEVKTETKTN

Sequences:

>Translated_315_residues
MRILFTIPHFFNPEGSGQHGSLRKDPQTRRIAITTCLTALKALYGQSQYMIDISRHQAIPANQSHGNNVDIIVCTTKGFH
LLSQIPLASNFLMHHNTNVEPMLLGFECQAVLKSCLGKYDYYCYLEDDLILHDPWFFVKLKWFNHHTGNSNLLQPNRYEV
SPLGPVPKAYIDGNLKPETTAKFQNIRDQPQLKGKIMEKVIAFHRTLNPHSGCYFLNSEQMAEWVSKPYFGDRDTSFIGP
LESAATLGIMRSFRIYKPAIADASFLEIQHFGTTFLSLIGNQISLWDKLIQGKEKTKTEAKNKVNKEVKTETKTN
>Mature_315_residues
MRILFTIPHFFNPEGSGQHGSLRKDPQTRRIAITTCLTALKALYGQSQYMIDISRHQAIPANQSHGNNVDIIVCTTKGFH
LLSQIPLASNFLMHHNTNVEPMLLGFECQAVLKSCLGKYDYYCYLEDDLILHDPWFFVKLKWFNHHTGNSNLLQPNRYEV
SPLGPVPKAYIDGNLKPETTAKFQNIRDQPQLKGKIMEKVIAFHRTLNPHSGCYFLNSEQMAEWVSKPYFGDRDTSFIGP
LESAATLGIMRSFRIYKPAIADASFLEIQHFGTTFLSLIGNQISLWDKLIQGKEKTKTEAKNKVNKEVKTETKTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35895; Mature: 35895

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFTIPHFFNPEGSGQHGSLRKDPQTRRIAITTCLTALKALYGQSQYMIDISRHQAIP
CEEEEECCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHCCCEEEEEEHHCCCCC
ANQSHGNNVDIIVCTTKGFHLLSQIPLASNFLMHHNTNVEPMLLGFECQAVLKSCLGKYD
CCCCCCCCEEEEEECCCCHHHHHHCCCHHCCCEECCCCCCEEEECHHHHHHHHHHHCCCC
YYCYLEDDLILHDPWFFVKLKWFNHHTGNSNLLQPNRYEVSPLGPVPKAYIDGNLKPETT
EEEEEECCEEEECCEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCCCHH
AKFQNIRDQPQLKGKIMEKVIAFHRTLNPHSGCYFLNSEQMAEWVSKPYFGDRDTSFIGP
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCC
LESAATLGIMRSFRIYKPAIADASFLEIQHFGTTFLSLIGNQISLWDKLIQGKEKTKTEA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH
KNKVNKEVKTETKTN
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MRILFTIPHFFNPEGSGQHGSLRKDPQTRRIAITTCLTALKALYGQSQYMIDISRHQAIP
CEEEEECCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHCCCEEEEEEHHCCCCC
ANQSHGNNVDIIVCTTKGFHLLSQIPLASNFLMHHNTNVEPMLLGFECQAVLKSCLGKYD
CCCCCCCCEEEEEECCCCHHHHHHCCCHHCCCEECCCCCCEEEECHHHHHHHHHHHCCCC
YYCYLEDDLILHDPWFFVKLKWFNHHTGNSNLLQPNRYEVSPLGPVPKAYIDGNLKPETT
EEEEEECCEEEECCEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCCCHH
AKFQNIRDQPQLKGKIMEKVIAFHRTLNPHSGCYFLNSEQMAEWVSKPYFGDRDTSFIGP
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCC
LESAATLGIMRSFRIYKPAIADASFLEIQHFGTTFLSLIGNQISLWDKLIQGKEKTKTEA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH
KNKVNKEVKTETKTN
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA