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The map label for this gene is ruvB

Identifier: 113475089

GI number: 113475089

Start: 2093317

End: 2094477

Strand: Direct

Name: ruvB

Synonym: Tery_1365

Alternate gene names: 113475089

Gene position: 2093317-2094477 (Clockwise)

Preceding gene: 113475079

Following gene: 113475090

Centisome position: 27.01

GC content: 40.14

Gene sequence:

>1161_bases
ATGGCCATAATTTCTTCTAAAAAACAATCTCCTCAACCAGAAAGGCCAGATGATGACATTTTCTTAGCCTCAGAAAATCA
AGTTTCATATAAATATAAAACGAAAAAATCAAAGTCTCAAGCTCAAAGATCGGAAGTAGAAGCTTTATTAGAACCAGAGG
CATCTGCTGCAGAAAAAAGTGATAATCAAAATGAGGAAAAAATCCGACCTCAAAGGTTAGATGAATATATCGGACAGAAA
GACCTAAAAGAGGTGTTGAATATTGCGATTTCGGCGGCTAAATCTAGAAAAGAATCTCTAGACCATTTACTATTGTATGG
TCCTCCAGGATTGGGGAAGACTACTATGTCTCTAATATTGGCAGCAGAAATGGAGGTTAATTGTAAGATTACAACTGCAC
CTGCTATTGAAAAACCTAGAGATATAGTTGGTTTGTTAGTAGGTTTACAAAAAGGGGATATTTTGTTTATAGATGAAATT
CATCGCCTTTCTAAAATGACCGAAGAAATACTTTATCCGGCGATGGAAGATTTTCGACTAGATATTACGGTTGGGCAAGG
TAAGAGCTCTAAGACTAGGAGTATTCCTCTCAAACCTTTTACTTTGGTAGGAGCAACTACTAAAGTGGGTTCTTTGACTT
CTCCTCTACGCGATCGCTTCGGAATTATTCAGAGGTTACGGTTTTATGAGGTTGATGAACTGAGTTTAATTATTATCCGA
GCAGCAAAAGTCTTAAATACGGATATTACAGAGGATGGTGCTGAGGAGGTTGCCCGTCGTTCCAGGGGTACGCCTCGAAT
TGCTAATCGTTTATTGAGAAGAGTGAGAGATTATTCGGAGGTGAAAAAGTTGACTCCGATAAATGCTGAGATTGCAGGTG
AAGCTTTGGAGTTGTTTAATGTTGACCCTCTTGGTTTAGATTGGACTGACCGTAATTTATTGAGGACTATGATTGAGAAT
TATAATGGTGGTCCTGCTGGTTTGGAGACTATGGCTGCAGCAACTGGGGAGGATGCTCAAACTATTGAGGAGGTTTATGA
GCCGTATTTGATGCAGATTGGATTTATGCAGCGTACTCCTCGTGGTCGAGTTGTGACTGCGGCTGGTTGGAGGCATTTGG
GTTTTAGTCCGCCGGATGAGCAGTTGAGTTTGAAGTTGTAG

Upstream 100 bases:

>100_bases
TATTTTCTGATACTGATAATAATGATTTCATAAATATGGGACAGTTATTAAATACACTACTTTGTATGATAATAAGGATG
TTAGATATAATTTTCCAGTT

Downstream 100 bases:

>100_bases
AGAAATAGATGATAGATGTATAGATTATCTAAACTTACTTACTATCAACTTTTACAGGAAAAACTAGTGGAGGAAGTTGC
TCATAACTTTTAAACCAGCT

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MAIISSKKQSPQPERPDDDIFLASENQVSYKYKTKKSKSQAQRSEVEALLEPEASAAEKSDNQNEEKIRPQRLDEYIGQK
DLKEVLNIAISAAKSRKESLDHLLLYGPPGLGKTTMSLILAAEMEVNCKITTAPAIEKPRDIVGLLVGLQKGDILFIDEI
HRLSKMTEEILYPAMEDFRLDITVGQGKSSKTRSIPLKPFTLVGATTKVGSLTSPLRDRFGIIQRLRFYEVDELSLIIIR
AAKVLNTDITEDGAEEVARRSRGTPRIANRLLRRVRDYSEVKKLTPINAEIAGEALELFNVDPLGLDWTDRNLLRTMIEN
YNGGPAGLETMAAATGEDAQTIEEVYEPYLMQIGFMQRTPRGRVVTAAGWRHLGFSPPDEQLSLKL

Sequences:

>Translated_386_residues
MAIISSKKQSPQPERPDDDIFLASENQVSYKYKTKKSKSQAQRSEVEALLEPEASAAEKSDNQNEEKIRPQRLDEYIGQK
DLKEVLNIAISAAKSRKESLDHLLLYGPPGLGKTTMSLILAAEMEVNCKITTAPAIEKPRDIVGLLVGLQKGDILFIDEI
HRLSKMTEEILYPAMEDFRLDITVGQGKSSKTRSIPLKPFTLVGATTKVGSLTSPLRDRFGIIQRLRFYEVDELSLIIIR
AAKVLNTDITEDGAEEVARRSRGTPRIANRLLRRVRDYSEVKKLTPINAEIAGEALELFNVDPLGLDWTDRNLLRTMIEN
YNGGPAGLETMAAATGEDAQTIEEVYEPYLMQIGFMQRTPRGRVVTAAGWRHLGFSPPDEQLSLKL
>Mature_385_residues
AIISSKKQSPQPERPDDDIFLASENQVSYKYKTKKSKSQAQRSEVEALLEPEASAAEKSDNQNEEKIRPQRLDEYIGQKD
LKEVLNIAISAAKSRKESLDHLLLYGPPGLGKTTMSLILAAEMEVNCKITTAPAIEKPRDIVGLLVGLQKGDILFIDEIH
RLSKMTEEILYPAMEDFRLDITVGQGKSSKTRSIPLKPFTLVGATTKVGSLTSPLRDRFGIIQRLRFYEVDELSLIIIRA
AKVLNTDITEDGAEEVARRSRGTPRIANRLLRRVRDYSEVKKLTPINAEIAGEALELFNVDPLGLDWTDRNLLRTMIENY
NGGPAGLETMAAATGEDAQTIEEVYEPYLMQIGFMQRTPRGRVVTAAGWRHLGFSPPDEQLSLKL

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family

Homologues:

Organism=Escherichia coli, GI1788167, Length=315, Percent_Identity=55.8730158730159, Blast_Score=383, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVB_TRIEI (Q115Z7)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_721150.1
- ProteinModelPortal:   Q115Z7
- SMR:   Q115Z7
- STRING:   Q115Z7
- GeneID:   4245465
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_1365
- NMPDR:   fig|203124.1.peg.4921
- eggNOG:   COG2255
- HOGENOM:   HBG339960
- OMA:   EKFDGGP
- PhylomeDB:   Q115Z7
- ProtClustDB:   PRK00080
- BioCyc:   TERY203124:TERY_1365-MONOMER
- HAMAP:   MF_00016
- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- ProDom:   PD005323
- SMART:   SM00382
- TIGRFAMs:   TIGR00635

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N

EC number: =3.6.4.12

Molecular weight: Translated: 43137; Mature: 43006

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIISSKKQSPQPERPDDDIFLASENQVSYKYKTKKSKSQAQRSEVEALLEPEASAAEKS
CCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHCC
DNQNEEKIRPQRLDEYIGQKDLKEVLNIAISAAKSRKESLDHLLLYGPPGLGKTTMSLIL
CCCCHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHH
AAEMEVNCKITTAPAIEKPRDIVGLLVGLQKGDILFIDEIHRLSKMTEEILYPAMEDFRL
HCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCHHCEEE
DITVGQGKSSKTRSIPLKPFTLVGATTKVGSLTSPLRDRFGIIQRLRFYEVDELSLIIIR
EEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AAKVLNTDITEDGAEEVARRSRGTPRIANRLLRRVRDYSEVKKLTPINAEIAGEALELFN
HHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
VDPLGLDWTDRNLLRTMIENYNGGPAGLETMAAATGEDAQTIEEVYEPYLMQIGFMQRTP
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
RGRVVTAAGWRHLGFSPPDEQLSLKL
CCCEEEECCCEECCCCCCCCCCEECC
>Mature Secondary Structure 
AIISSKKQSPQPERPDDDIFLASENQVSYKYKTKKSKSQAQRSEVEALLEPEASAAEKS
CCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHCC
DNQNEEKIRPQRLDEYIGQKDLKEVLNIAISAAKSRKESLDHLLLYGPPGLGKTTMSLIL
CCCCHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHH
AAEMEVNCKITTAPAIEKPRDIVGLLVGLQKGDILFIDEIHRLSKMTEEILYPAMEDFRL
HCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCHHCEEE
DITVGQGKSSKTRSIPLKPFTLVGATTKVGSLTSPLRDRFGIIQRLRFYEVDELSLIIIR
EEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AAKVLNTDITEDGAEEVARRSRGTPRIANRLLRRVRDYSEVKKLTPINAEIAGEALELFN
HHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
VDPLGLDWTDRNLLRTMIENYNGGPAGLETMAAATGEDAQTIEEVYEPYLMQIGFMQRTP
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
RGRVVTAAGWRHLGFSPPDEQLSLKL
CCCEEEECCCEECCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA