| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475061
Identifier: 113475061
GI number: 113475061
Start: 2029603
End: 2030283
Strand: Reverse
Name: 113475061
Synonym: Tery_1332
Alternate gene names: NA
Gene position: 2030283-2029603 (Counterclockwise)
Preceding gene: 113475063
Following gene: 113475059
Centisome position: 26.2
GC content: 24.67
Gene sequence:
>681_bases TTGATAAATGTTATTACTGGAACTAGCTACAGGAGTAAAAGTAGGAAAAATTACAATTTTTGGATAACTGAAAAGTTAGG CTATAGTCTCAAAAAAAAATATTGTATGCAGCTAAAAAAGAATAGGAAAAATTACAATTTTTGGATAACTGAAAAGTTAG ACTATAGTCTCAAAAAAAAATATTGTATGCAGCTAAAAAAGAATAGGAAAAATTACAATTTTTGGATAACTGAAAAGTTA GACTATAGTCTCAAAAAAAAATATTGTATGCAGCTAAAAAAGAATAGGAAAAATTACAATTTTTGGATAACTGAAAAGTT AGACTATAGTCTCAAAAAAAAATATTGTATGCAGCTAAAAAAGAATAGGAAAAATTACAATTTTTGGATAACTGAAAAGT TAGGCTATAGTCTCAAAAAAAAATATTGTATGCAGCTAAAAAAGAATAGGAAAAATTACAATTTTTGGATAACTGAAAAG TTAGGCTATAGTCTCAAAAAAAAATATTGTATGCAGCTAAAAAAGAATAGGAAAAATTACAATTTTTGGATAACTGAAAA GTTAGACTATAGTCTCAAAAAAAAATATTGTATGCAGCTAAAAAAGAATAGGAAAAATTACAATTTTTGGATAACTGAAA AGTTAGGCTATAGTCTCAAAAAAAATATTGTATGCAGCTAA
Upstream 100 bases:
>100_bases ATATTTCTTGGAGTTCTTTGGATGATTCCAGAATATCTAGTTTAACAAGACACGCCATATTATTCACTGTTTTCATGTTC ATTAAAGTATAGCATTATTT
Downstream 100 bases:
>100_bases AAAAGAATAGGAAAAATTACAATTTTTGGATAACTGAAAAGTTAGACTATAGTCTCAAAAAAAAATATTGTATGCAGCTA AAAAAGAATAGGAAAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MINVITGTSYRSKSRKNYNFWITEKLGYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKL DYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKLGYSLKKKYCMQLKKNRKNYNFWITEK LGYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKLGYSLKKNIVCS
Sequences:
>Translated_226_residues MINVITGTSYRSKSRKNYNFWITEKLGYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKL DYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKLGYSLKKKYCMQLKKNRKNYNFWITEK LGYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKLGYSLKKNIVCS >Mature_226_residues MINVITGTSYRSKSRKNYNFWITEKLGYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKL DYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKLGYSLKKKYCMQLKKNRKNYNFWITEK LGYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKLGYSLKKNIVCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28433; Mature: 28433
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVITGTSYRSKSRKNYNFWITEKLGYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKK CEEEEECCCCCCCCCCCCEEEEEHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH YCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLK HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH KNRKNYNFWITEKLGYSLKKKYCMQLKKNRKNYNFWITEKLGYSLKKKYCMQLKKNRKNY HCCCCCEEEEEHHHCHHHHHHHHHHHHHCCCCCEEEEEHHHCHHHHHHHHHHHHHCCCCC NFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKLGYSLKKNIVCS EEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCHHHCCCCCC >Mature Secondary Structure MINVITGTSYRSKSRKNYNFWITEKLGYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKK CEEEEECCCCCCCCCCCCEEEEEHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH YCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKLDYSLKKKYCMQLK HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH KNRKNYNFWITEKLGYSLKKKYCMQLKKNRKNYNFWITEKLGYSLKKKYCMQLKKNRKNY HCCCCCEEEEEHHHCHHHHHHHHHHHHHCCCCCEEEEEHHHCHHHHHHHHHHHHHCCCCC NFWITEKLDYSLKKKYCMQLKKNRKNYNFWITEKLGYSLKKNIVCS EEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA