| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475055
Identifier: 113475055
GI number: 113475055
Start: 2016583
End: 2016810
Strand: Reverse
Name: 113475055
Synonym: Tery_1322
Alternate gene names: NA
Gene position: 2016810-2016583 (Counterclockwise)
Preceding gene: 113475058
Following gene: 113475053
Centisome position: 26.02
GC content: 44.74
Gene sequence:
>228_bases ATGATAGCTCCCATGCTAGCTATGGCTTTTTCTGAAACATCCAGAGGAAGGAAACAAACAGTAGAGTTACCAGAAGTTGT TAATAGTATTCTCTACAGTCATCGTAGTGGTTGCACCTGGGAACTCTTACCCCATGACTTCCCACCGGCCTTTACTGTGT ATGGTTGCCGAAAATGTCAGGAGTCTTGGAGTCTGGCAATGAATTCACGATCGCCTACAAGTTCATGA
Upstream 100 bases:
>100_bases GTAAAACAGAGAAAATCTAACTCGTCAACTAGAGCTGAAACATTGAGAACATGGCTCGCTCTCAACTATTCCAAAGAGCT AAGGTATCGCTACTTGGCAA
Downstream 100 bases:
>100_bases AAGTTTTGAGGTTGGATCTCAACATTGGGTGCTGGAGAAAACTTTAGATAGGCTTAGACGCCAAAGAGAACTCAGTAAAG ATTAGGAGGGTTGAGCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MIAPMLAMAFSETSRGRKQTVELPEVVNSILYSHRSGCTWELLPHDFPPAFTVYGCRKCQESWSLAMNSRSPTSS
Sequences:
>Translated_75_residues MIAPMLAMAFSETSRGRKQTVELPEVVNSILYSHRSGCTWELLPHDFPPAFTVYGCRKCQESWSLAMNSRSPTSS >Mature_75_residues MIAPMLAMAFSETSRGRKQTVELPEVVNSILYSHRSGCTWELLPHDFPPAFTVYGCRKCQESWSLAMNSRSPTSS
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8424; Mature: 8424
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPMLAMAFSETSRGRKQTVELPEVVNSILYSHRSGCTWELLPHDFPPAFTVYGCRKCQ CCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHH ESWSLAMNSRSPTSS HHHHHHCCCCCCCCC >Mature Secondary Structure MIAPMLAMAFSETSRGRKQTVELPEVVNSILYSHRSGCTWELLPHDFPPAFTVYGCRKCQ CCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHH ESWSLAMNSRSPTSS HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA