| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475012
Identifier: 113475012
GI number: 113475012
Start: 1944502
End: 1944867
Strand: Reverse
Name: 113475012
Synonym: Tery_1258
Alternate gene names: NA
Gene position: 1944867-1944502 (Counterclockwise)
Preceding gene: 113475013
Following gene: 113475011
Centisome position: 25.09
GC content: 32.24
Gene sequence:
>366_bases ATGAGTATTTTACAACTTTTGATTCTTTGGTTTGTGACTGCTGTTAGTTTATTTATTATTTCTAAGTTACCAACAGGAGT AGAAATTGATGATTTTAAAATCGCGTTAATTTCTTCGGTAGTTTTTGGATTTTTAAATGCTTTAGTTCGTCCAGTTTTAG TTGCTGTAGTTTTCCCTATTAAGATTGTTCTTTCAAGTTTTCTTTTTACTCTACTTCTGAATATGTCTATCTTTGGTTTA GCAGCTTGGTTGGTTAGTGGATTTCGCTTACGTTGGGGATTTTGGAGTGCTCTAATTGGTTCGGTAGCACTAGGTTTTAT CAACTCTTTTCTTTATGAATTACTGAATAGGGTAGTAGTAAGTTAA
Upstream 100 bases:
>100_bases GTTTAGTAAGGAGTGAAGGCAAGGATTATCTTGTTAAGGAAGGTGATATTATGCTCTTCCGATTTAATGTTTAGATTGCT GTTAATTAAGGAGAAAAAAA
Downstream 100 bases:
>100_bases GTAGGTATCCAAAAAAAACACTCACTATATTAACTTTTGTAAGTTGACTCCAAGTTACTATCTAAAGTTAACTTGAGGTT AATTTTATTTTGTTAAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSILQLLILWFVTAVSLFIISKLPTGVEIDDFKIALISSVVFGFLNALVRPVLVAVVFPIKIVLSSFLFTLLLNMSIFGL AAWLVSGFRLRWGFWSALIGSVALGFINSFLYELLNRVVVS
Sequences:
>Translated_121_residues MSILQLLILWFVTAVSLFIISKLPTGVEIDDFKIALISSVVFGFLNALVRPVLVAVVFPIKIVLSSFLFTLLLNMSIFGL AAWLVSGFRLRWGFWSALIGSVALGFINSFLYELLNRVVVS >Mature_120_residues SILQLLILWFVTAVSLFIISKLPTGVEIDDFKIALISSVVFGFLNALVRPVLVAVVFPIKIVLSSFLFTLLLNMSIFGLA AWLVSGFRLRWGFWSALIGSVALGFINSFLYELLNRVVVS
Specific function: Unknown
COG id: COG1950
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13426; Mature: 13294
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILQLLILWFVTAVSLFIISKLPTGVEIDDFKIALISSVVFGFLNALVRPVLVAVVFPI CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVLSSFLFTLLLNMSIFGLAAWLVSGFRLRWGFWSALIGSVALGFINSFLYELLNRVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC S C >Mature Secondary Structure SILQLLILWFVTAVSLFIISKLPTGVEIDDFKIALISSVVFGFLNALVRPVLVAVVFPI HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVLSSFLFTLLLNMSIFGLAAWLVSGFRLRWGFWSALIGSVALGFINSFLYELLNRVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA