Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475011

Identifier: 113475011

GI number: 113475011

Start: 1942378

End: 1942674

Strand: Reverse

Name: 113475011

Synonym: Tery_1256

Alternate gene names: NA

Gene position: 1942674-1942378 (Counterclockwise)

Preceding gene: 113475012

Following gene: 113475004

Centisome position: 25.07

GC content: 31.31

Gene sequence:

>297_bases
ATGTCTTACAGTTTAGACTTCAGACAAAAAGTCATAAATTTTGTAGAAAATGGTGGTACTATTACCGAAGCAGCTCATGT
ATTTGGGATAGGCATAGCTTCGATATATAGATGGTCATCTCGCCAAAAATTGGAAGCAACTAAGGTAAAGCGTCGTCGAA
TAAAATTAGATTGGAAAGAATTAGAAAAAGATGTCAAACTAAATTCAGAGTTTAAATTGGCATACAAAGCTAAAAAAAAA
ATTGGAGTTAATCAAACAGCTATATTTTATGCTTTGAAAAGAATGAATTTTCCTTGA

Upstream 100 bases:

>100_bases
CTAGTTTTTCCTTCATACAAGTATTTATAGTTGTTTTAATTAAGATTGAGAGAAAAATTAAGTAGAATAATTTTAAGTCA
ATTAGAAACTATTTCTAACT

Downstream 100 bases:

>100_bases
AAAAAAACAACTTCGTTACAGGGAAAGAAATAGAGAAGAAAGAATAAAATATTATCAGCTTTCCCTCAAAATTTCATTAA
AAAAATTGGAAATAAAAGCG

Product: transposase

Products: NA

Alternate protein names: Transposase Family Protein

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSYSLDFRQKVINFVENGGTITEAAHVFGIGIASIYRWSSRQKLEATKVKRRRIKLDWKELEKDVKLNSEFKLAYKAKKK
IGVNQTAIFYALKRMNFP

Sequences:

>Translated_98_residues
MSYSLDFRQKVINFVENGGTITEAAHVFGIGIASIYRWSSRQKLEATKVKRRRIKLDWKELEKDVKLNSEFKLAYKAKKK
IGVNQTAIFYALKRMNFP
>Mature_97_residues
SYSLDFRQKVINFVENGGTITEAAHVFGIGIASIYRWSSRQKLEATKVKRRRIKLDWKELEKDVKLNSEFKLAYKAKKKI
GVNQTAIFYALKRMNFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11459; Mature: 11327

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSLDFRQKVINFVENGGTITEAAHVFGIGIASIYRWSSRQKLEATKVKRRRIKLDWKE
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
LEKDVKLNSEFKLAYKAKKKIGVNQTAIFYALKRMNFP
HHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SYSLDFRQKVINFVENGGTITEAAHVFGIGIASIYRWSSRQKLEATKVKRRRIKLDWKE
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH
LEKDVKLNSEFKLAYKAKKKIGVNQTAIFYALKRMNFP
HHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA