Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474913

Identifier: 113474913

GI number: 113474913

Start: 1796113

End: 1796532

Strand: Reverse

Name: 113474913

Synonym: Tery_1139

Alternate gene names: NA

Gene position: 1796532-1796113 (Counterclockwise)

Preceding gene: 113474915

Following gene: 113474911

Centisome position: 23.18

GC content: 34.52

Gene sequence:

>420_bases
ATGCATGCTACTAAACCTGTTCAATTTTCACTCCATTCTCAGAGTCAGCCTATTCCAGTCCAACAAAGAGTTTTCTCTAA
ACGACAAAAGTCAACTTATACAGTAGAAATAACAATTGAAAGTATCGCCAAATTATTAACTAATGTCTTGCTTTCTATCT
GTGTAACTTCAGCTCTATTAAAATTGTTACCTCATTACCTATCAATTCAAGAAAAACTACAGGTTATAGAATCTGAAATT
GAGGTGACAACAGAGAGACTGCAGAATGATCAGGAAAAATTTAGCCGTTATTTTGATCCGGGTCAAGTTCAGACTATTAT
GCAGGAGCAAAGTAACCAAGTAGAGTCTCATCAAATACCGATAATTTGGTTGGAAGATAATGGTATTAAACAAAGCCCAC
AATCTAATTCTTCTCTATAG

Upstream 100 bases:

>100_bases
ATCTGTATATATAGTTTTATATTTAATTAGCCAGCCCTGGATAGATTAATCTACAATTGGGAAAAGTATTATAATTAATT
AACTTATCCTGGACAAAAGT

Downstream 100 bases:

>100_bases
TTATTTAGGACTTGGGAGTTAAATTAATCTGAATGAATAAATATTAATTAAATATTAAGTATATGTGTGGGGAAGTAATC
GAAAAAATTGTATTTCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MHATKPVQFSLHSQSQPIPVQQRVFSKRQKSTYTVEITIESIAKLLTNVLLSICVTSALLKLLPHYLSIQEKLQVIESEI
EVTTERLQNDQEKFSRYFDPGQVQTIMQEQSNQVESHQIPIIWLEDNGIKQSPQSNSSL

Sequences:

>Translated_139_residues
MHATKPVQFSLHSQSQPIPVQQRVFSKRQKSTYTVEITIESIAKLLTNVLLSICVTSALLKLLPHYLSIQEKLQVIESEI
EVTTERLQNDQEKFSRYFDPGQVQTIMQEQSNQVESHQIPIIWLEDNGIKQSPQSNSSL
>Mature_139_residues
MHATKPVQFSLHSQSQPIPVQQRVFSKRQKSTYTVEITIESIAKLLTNVLLSICVTSALLKLLPHYLSIQEKLQVIESEI
EVTTERLQNDQEKFSRYFDPGQVQTIMQEQSNQVESHQIPIIWLEDNGIKQSPQSNSSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15933; Mature: 15933

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHATKPVQFSLHSQSQPIPVQQRVFSKRQKSTYTVEITIESIAKLLTNVLLSICVTSALL
CCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
KLLPHYLSIQEKLQVIESEIEVTTERLQNDQEKFSRYFDPGQVQTIMQEQSNQVESHQIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCC
IIWLEDNGIKQSPQSNSSL
EEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MHATKPVQFSLHSQSQPIPVQQRVFSKRQKSTYTVEITIESIAKLLTNVLLSICVTSALL
CCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
KLLPHYLSIQEKLQVIESEIEVTTERLQNDQEKFSRYFDPGQVQTIMQEQSNQVESHQIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCC
IIWLEDNGIKQSPQSNSSL
EEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA