Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474906

Identifier: 113474906

GI number: 113474906

Start: 1786867

End: 1788537

Strand: Reverse

Name: 113474906

Synonym: Tery_1132

Alternate gene names: NA

Gene position: 1788537-1786867 (Counterclockwise)

Preceding gene: 113474908

Following gene: 113474905

Centisome position: 23.08

GC content: 28.67

Gene sequence:

>1671_bases
ATGTTAAGCATAGCTGAAAAAGAACAAAAAGTATTATGGAGAATATTTTTAACTGTAATAAGTATTTCACTTCCAATTGC
ATTAAATTATTTATCCAGTGACAATAAATTATTGAAATACCTGTCTTATATTGTCCTATTCATTTGGGGTATCCTAGTAA
TTTACTTGTTATTTTCTGGGTTTATAAAGTATTACAAGACTAGAAATACATTTAGGCGTTTATTAACAGTAAGAGATAAA
AAAGTCATTGACAATTATCTGACTGCTGTAAACCAGGAAGTAGAATTTGAACTTGGATTTGATCTAAAAAGTAATTATGT
AAGTTTATCCGGAGAGCCAGGAAATCCAAATGGTCTGATGTCTCAACAAGCTTATGAAGAAAAAGGAGGTAGTCAGCGAA
CTAACATAGCAAATCTTGATAAATACTTGTTATCTCCAAACAAATCTAGGGTATTTATATACGGTCCTCCAGGAAGTGGA
AAGTCTACAACTTTATATAAAGCACTTGCAAACTATACCAAAGAATTTTCCGAAAGCATAGGAGATTTTATTCCCATTTT
TATTCATGCTAATGATGTTGAAAAAGTGTTAAACAAGCATGGTAAAAATATAACAAAAATTCTGGCATTTATTACAAATG
TATATGAACTTAATGGTAAGTTATCAAAGCCTGAGTTTAAAGATTTTATAGTTTTATGGAATAAGAAACTATCTCTCAAT
TTTGTGATTATTATTGATGCTTTAGATGAGTTTATAGACAAAAGTAAACGGGAAACTCTCTTTGATTATTTATCAATTTT
AATGAAAAATAGCGGTAATAAAACTAGATGGATTTTATCATGTAGAGAAGAAGAATATAAAGCGTATGCTAATACTTTGC
AAGTAGCAAATATCAGAATAAAACCCATGAGTGTACTGCAAATTAAAGAACTTTTAAATAAGCGATTAACAAGTTTGCAA
CACGATACTTTAGCCCAGAATCAAATTAGAAAAACTATTTTGACAATCATAAATACTAATGCAGAACAGGAATCCTTTTT
AAGGAACCCTTACTATTTATCGTTATGGCTATATCAAGTTTCATTCTCTTCTGATAAATCAGATTTTGCTGATACAAAAA
ATCGCATCCCATCTATCAGCAGTTTGCACGATCTAGAGTTAAAACGGGAGATATTAAAAGGTATGGATATAAATCCACAA
AACCGTTTTGAAAAAATAGAACCAGTCCTATTTAAATACCTTTTGGAAGTATTATCAGTTTTGAGCTTTCATCTTATGAG
GATATCTTTAAAAATTCAACAAACTTCTCATTACGGTGTAAGTATTTCCAATGATAGTATTGTTAATTCACTATATGAAA
AATACAAATATTTGAAAAATGATATAGTCAATTTTGACAAAAAAATAAGCCAAAGGTTAGCTCAATATCAATCTTATGAA
CTATCAGTAGATAAAATCCAAGAACTCAAAATTATTGAAAGTGATAGACAGTTTATAAGAATACTGAAAATCTTAAATAC
CTCTCAGTTGCAGTGGCAAAATTTAGGTTTGAGAAGTCAAAATAAATTTGATTTTTTTATTGTAATTCCTAGTATTATGG
ATCTGGCAGAACAATATCGCCTAATAGAATTAGATGCCAATAATGATTATTTTTCTAGATTTTTTAATTAA

Upstream 100 bases:

>100_bases
AGTGCTATACTTCGACTGCTATATGATAAATATTACACTAGCTTTTCAGGCATAATTAGGTACAAATTTTTATGACTTTA
GGAAATAGCAAATAAAGGAT

Downstream 100 bases:

>100_bases
AGAGCTGCTGACTATTTGGCAGCTCGCTATCTTGTTGAAAATGGCTTGAAGGAAATACTCCAGAAAGGAGAAATTAATTT
TTGGTTATTCAGAACAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MLSIAEKEQKVLWRIFLTVISISLPIALNYLSSDNKLLKYLSYIVLFIWGILVIYLLFSGFIKYYKTRNTFRRLLTVRDK
KVIDNYLTAVNQEVEFELGFDLKSNYVSLSGEPGNPNGLMSQQAYEEKGGSQRTNIANLDKYLLSPNKSRVFIYGPPGSG
KSTTLYKALANYTKEFSESIGDFIPIFIHANDVEKVLNKHGKNITKILAFITNVYELNGKLSKPEFKDFIVLWNKKLSLN
FVIIIDALDEFIDKSKRETLFDYLSILMKNSGNKTRWILSCREEEYKAYANTLQVANIRIKPMSVLQIKELLNKRLTSLQ
HDTLAQNQIRKTILTIINTNAEQESFLRNPYYLSLWLYQVSFSSDKSDFADTKNRIPSISSLHDLELKREILKGMDINPQ
NRFEKIEPVLFKYLLEVLSVLSFHLMRISLKIQQTSHYGVSISNDSIVNSLYEKYKYLKNDIVNFDKKISQRLAQYQSYE
LSVDKIQELKIIESDRQFIRILKILNTSQLQWQNLGLRSQNKFDFFIVIPSIMDLAEQYRLIELDANNDYFSRFFN

Sequences:

>Translated_556_residues
MLSIAEKEQKVLWRIFLTVISISLPIALNYLSSDNKLLKYLSYIVLFIWGILVIYLLFSGFIKYYKTRNTFRRLLTVRDK
KVIDNYLTAVNQEVEFELGFDLKSNYVSLSGEPGNPNGLMSQQAYEEKGGSQRTNIANLDKYLLSPNKSRVFIYGPPGSG
KSTTLYKALANYTKEFSESIGDFIPIFIHANDVEKVLNKHGKNITKILAFITNVYELNGKLSKPEFKDFIVLWNKKLSLN
FVIIIDALDEFIDKSKRETLFDYLSILMKNSGNKTRWILSCREEEYKAYANTLQVANIRIKPMSVLQIKELLNKRLTSLQ
HDTLAQNQIRKTILTIINTNAEQESFLRNPYYLSLWLYQVSFSSDKSDFADTKNRIPSISSLHDLELKREILKGMDINPQ
NRFEKIEPVLFKYLLEVLSVLSFHLMRISLKIQQTSHYGVSISNDSIVNSLYEKYKYLKNDIVNFDKKISQRLAQYQSYE
LSVDKIQELKIIESDRQFIRILKILNTSQLQWQNLGLRSQNKFDFFIVIPSIMDLAEQYRLIELDANNDYFSRFFN
>Mature_556_residues
MLSIAEKEQKVLWRIFLTVISISLPIALNYLSSDNKLLKYLSYIVLFIWGILVIYLLFSGFIKYYKTRNTFRRLLTVRDK
KVIDNYLTAVNQEVEFELGFDLKSNYVSLSGEPGNPNGLMSQQAYEEKGGSQRTNIANLDKYLLSPNKSRVFIYGPPGSG
KSTTLYKALANYTKEFSESIGDFIPIFIHANDVEKVLNKHGKNITKILAFITNVYELNGKLSKPEFKDFIVLWNKKLSLN
FVIIIDALDEFIDKSKRETLFDYLSILMKNSGNKTRWILSCREEEYKAYANTLQVANIRIKPMSVLQIKELLNKRLTSLQ
HDTLAQNQIRKTILTIINTNAEQESFLRNPYYLSLWLYQVSFSSDKSDFADTKNRIPSISSLHDLELKREILKGMDINPQ
NRFEKIEPVLFKYLLEVLSVLSFHLMRISLKIQQTSHYGVSISNDSIVNSLYEKYKYLKNDIVNFDKKISQRLAQYQSYE
LSVDKIQELKIIESDRQFIRILKILNTSQLQWQNLGLRSQNKFDFFIVIPSIMDLAEQYRLIELDANNDYFSRFFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64889; Mature: 64889

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIAEKEQKVLWRIFLTVISISLPIALNYLSSDNKLLKYLSYIVLFIWGILVIYLLFSG
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FIKYYKTRNTFRRLLTVRDKKVIDNYLTAVNQEVEFELGFDLKSNYVSLSGEPGNPNGLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCC
SQQAYEEKGGSQRTNIANLDKYLLSPNKSRVFIYGPPGSGKSTTLYKALANYTKEFSESI
CHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
GDFIPIFIHANDVEKVLNKHGKNITKILAFITNVYELNGKLSKPEFKDFIVLWNKKLSLN
CCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHCEEEEECCCEEEE
FVIIIDALDEFIDKSKRETLFDYLSILMKNSGNKTRWILSCREEEYKAYANTLQVANIRI
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHEEEEEEE
KPMSVLQIKELLNKRLTSLQHDTLAQNQIRKTILTIINTNAEQESFLRNPYYLSLWLYQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEEEEE
SFSSDKSDFADTKNRIPSISSLHDLELKREILKGMDINPQNRFEKIEPVLFKYLLEVLSV
ECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LSFHLMRISLKIQQTSHYGVSISNDSIVNSLYEKYKYLKNDIVNFDKKISQRLAQYQSYE
HHHHHHHHEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSVDKIQELKIIESDRQFIRILKILNTSQLQWQNLGLRSQNKFDFFIVIPSIMDLAEQYR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEEECHHHHHHHHCCE
LIELDANNDYFSRFFN
EEEEECCCHHHHHHCC
>Mature Secondary Structure
MLSIAEKEQKVLWRIFLTVISISLPIALNYLSSDNKLLKYLSYIVLFIWGILVIYLLFSG
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FIKYYKTRNTFRRLLTVRDKKVIDNYLTAVNQEVEFELGFDLKSNYVSLSGEPGNPNGLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCC
SQQAYEEKGGSQRTNIANLDKYLLSPNKSRVFIYGPPGSGKSTTLYKALANYTKEFSESI
CHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
GDFIPIFIHANDVEKVLNKHGKNITKILAFITNVYELNGKLSKPEFKDFIVLWNKKLSLN
CCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHCEEEEECCCEEEE
FVIIIDALDEFIDKSKRETLFDYLSILMKNSGNKTRWILSCREEEYKAYANTLQVANIRI
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHEEEEEEE
KPMSVLQIKELLNKRLTSLQHDTLAQNQIRKTILTIINTNAEQESFLRNPYYLSLWLYQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEEEEE
SFSSDKSDFADTKNRIPSISSLHDLELKREILKGMDINPQNRFEKIEPVLFKYLLEVLSV
ECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LSFHLMRISLKIQQTSHYGVSISNDSIVNSLYEKYKYLKNDIVNFDKKISQRLAQYQSYE
HHHHHHHHEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSVDKIQELKIIESDRQFIRILKILNTSQLQWQNLGLRSQNKFDFFIVIPSIMDLAEQYR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEEECHHHHHHHHCCE
LIELDANNDYFSRFFN
EEEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA