Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474908

Identifier: 113474908

GI number: 113474908

Start: 1789540

End: 1789920

Strand: Reverse

Name: 113474908

Synonym: Tery_1134

Alternate gene names: NA

Gene position: 1789920-1789540 (Counterclockwise)

Preceding gene: 113474909

Following gene: 113474906

Centisome position: 23.1

GC content: 32.55

Gene sequence:

>381_bases
GTGAATCAAGGGAACTCAAAAATATTTCAATTAACTATATCTAATATTCGTAATTGGCTAGTTTTTTTAGCTGTTATTTG
GTTTCTGGGTTCTGTAGGGTTGGGATGGTTAATTAATTCGATTTTAATATTATTTGGTTTTATTGTAATTACACCTATAG
TTGCATTTATTGGTCTACGTTGGTGGTTAAATCGCAATGTAATTACGGATAAATGTCCTATTTGCAGTCATGAATTTACT
GCTTTAAATCAGACTCAATGTCAATGTCCTAGTTGTGGAGAACCTCTTAAGGTTGAAGGAGGTCATTTTAATAGATTGAC
TCCTCCTGGTACAATTGATGTTTCTGCTGTGGAAGTTAATGGGCAAAAAATTGAAGATTAA

Upstream 100 bases:

>100_bases
TTCTTTCTTCGGTGTGATAATGGGTTAATAATTTATAACTGGTAGCTGATAGTTAACGGCTAAATGCTTACGAAGAGAGT
TTATTAAAGGAGATAATTAA

Downstream 100 bases:

>100_bases
ATGTATCAAAAATTAGATGTATTAAAAGGGAATTAGGAATGATAAATGGGGAAAAAGTATTCATTATTTATCTGTTTTCA
AAGTTACGATTAAGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MNQGNSKIFQLTISNIRNWLVFLAVIWFLGSVGLGWLINSILILFGFIVITPIVAFIGLRWWLNRNVITDKCPICSHEFT
ALNQTQCQCPSCGEPLKVEGGHFNRLTPPGTIDVSAVEVNGQKIED

Sequences:

>Translated_126_residues
MNQGNSKIFQLTISNIRNWLVFLAVIWFLGSVGLGWLINSILILFGFIVITPIVAFIGLRWWLNRNVITDKCPICSHEFT
ALNQTQCQCPSCGEPLKVEGGHFNRLTPPGTIDVSAVEVNGQKIED
>Mature_126_residues
MNQGNSKIFQLTISNIRNWLVFLAVIWFLGSVGLGWLINSILILFGFIVITPIVAFIGLRWWLNRNVITDKCPICSHEFT
ALNQTQCQCPSCGEPLKVEGGHFNRLTPPGTIDVSAVEVNGQKIED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14058; Mature: 14058

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQGNSKIFQLTISNIRNWLVFLAVIWFLGSVGLGWLINSILILFGFIVITPIVAFIGLR
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WWLNRNVITDKCPICSHEFTALNQTQCQCPSCGEPLKVEGGHFNRLTPPGTIDVSAVEVN
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEEC
GQKIED
CCCCCC
>Mature Secondary Structure
MNQGNSKIFQLTISNIRNWLVFLAVIWFLGSVGLGWLINSILILFGFIVITPIVAFIGLR
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WWLNRNVITDKCPICSHEFTALNQTQCQCPSCGEPLKVEGGHFNRLTPPGTIDVSAVEVN
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEEC
GQKIED
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA