Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474826

Identifier: 113474826

GI number: 113474826

Start: 1632117

End: 1632995

Strand: Direct

Name: 113474826

Synonym: Tery_1042

Alternate gene names: NA

Gene position: 1632117-1632995 (Clockwise)

Preceding gene: 113474824

Following gene: 113474827

Centisome position: 21.06

GC content: 31.97

Gene sequence:

>879_bases
ATGACAAATCAAATTAATGATACATTTATGCAAGCACGCCAGGGTAACATAGCAGCAATTATTCAAGTTATGAATGAAAA
TTTAGCTAAGTTAGGTGTAAGAATTAGAGCTATATTTTCTGATGGTGTTTTGCAAGTTTTATGTGAAGCACCAGAGCCTC
AACATTTAGAAAAGTCTAGTATTTTAAAAGAGGTTAAACAAACCCTTGAAGAAATTTCACCTCGTAATATTCAGCAAATA
GAAATTAATAGTAGAATATTTAAATATCCACAACTACTTTGGCTAGAAGATATTACTAAAAATCCAGATAATAAATTACT
TTGGTCTCAAAAAATTATTTTGACTAAACCAAATATTTTCAAGCAAATAGCAAATAATTTTTATATTAATAAGCTTAAAC
GGACTAAAATACCTATGTCTAAAGGTATTCTTCTGAAGAGAATGCAAAGGCTAGATCAATTCCAACCTGATATAATAGGC
ATTTTTCTTCTGAGTCTGATAATGCTAACTTTAGGTATTCAAGTTAATAGATGGCTCAACAATTCTTGGATAGATCAAAT
AACAACTTCAGAAAATATAGCTTCCCAGCCTTCATTTCTTAATGATAAAAAATCTTCAGAAGATACTGAGTTGAAGTCAA
AAGTAGCTTTTACTCAAGCAGTACGACTGGCTCAAAAAGCTGTTGCATATGGTAAGATAGCTAAGTCTAAAGAAGAATGG
ATGGCGATCGCTAAGATATGGGAAGAAGCAGCAGAACTAATGGCTTCTGTTTCACCTAGTTACTCACGGCATGATGTAGC
ACTAGATAGGGCTGAAATTTATCAGAAAAATAGTGATATTGCCAAAACACAAGTAGAGAAAATTGTTAGAGGAGAATGA

Upstream 100 bases:

>100_bases
GGGTATACTTAATAACAAAGGAAAGGCTGTATCAATAATTATGTCTTTGCCTATTTCCTATTTTATATTCTCTATTCCCT
TGCAATAACTATTAATATCA

Downstream 100 bases:

>100_bases
GAGGGTTTAGTAGTTGGAAATCATAAAGTTTTTTAGATTGATGAATTAAGCAAAAGATTTTAAAGATTTATGGAATATCT
CTAATTTAGTTTACTAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTNQINDTFMQARQGNIAAIIQVMNENLAKLGVRIRAIFSDGVLQVLCEAPEPQHLEKSSILKEVKQTLEEISPRNIQQI
EINSRIFKYPQLLWLEDITKNPDNKLLWSQKIILTKPNIFKQIANNFYINKLKRTKIPMSKGILLKRMQRLDQFQPDIIG
IFLLSLIMLTLGIQVNRWLNNSWIDQITTSENIASQPSFLNDKKSSEDTELKSKVAFTQAVRLAQKAVAYGKIAKSKEEW
MAIAKIWEEAAELMASVSPSYSRHDVALDRAEIYQKNSDIAKTQVEKIVRGE

Sequences:

>Translated_292_residues
MTNQINDTFMQARQGNIAAIIQVMNENLAKLGVRIRAIFSDGVLQVLCEAPEPQHLEKSSILKEVKQTLEEISPRNIQQI
EINSRIFKYPQLLWLEDITKNPDNKLLWSQKIILTKPNIFKQIANNFYINKLKRTKIPMSKGILLKRMQRLDQFQPDIIG
IFLLSLIMLTLGIQVNRWLNNSWIDQITTSENIASQPSFLNDKKSSEDTELKSKVAFTQAVRLAQKAVAYGKIAKSKEEW
MAIAKIWEEAAELMASVSPSYSRHDVALDRAEIYQKNSDIAKTQVEKIVRGE
>Mature_291_residues
TNQINDTFMQARQGNIAAIIQVMNENLAKLGVRIRAIFSDGVLQVLCEAPEPQHLEKSSILKEVKQTLEEISPRNIQQIE
INSRIFKYPQLLWLEDITKNPDNKLLWSQKIILTKPNIFKQIANNFYINKLKRTKIPMSKGILLKRMQRLDQFQPDIIGI
FLLSLIMLTLGIQVNRWLNNSWIDQITTSENIASQPSFLNDKKSSEDTELKSKVAFTQAVRLAQKAVAYGKIAKSKEEWM
AIAKIWEEAAELMASVSPSYSRHDVALDRAEIYQKNSDIAKTQVEKIVRGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33482; Mature: 33351

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQINDTFMQARQGNIAAIIQVMNENLAKLGVRIRAIFSDGVLQVLCEAPEPQHLEKSS
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
ILKEVKQTLEEISPRNIQQIEINSRIFKYPQLLWLEDITKNPDNKLLWSQKIILTKPNIF
HHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCHHH
KQIANNFYINKLKRTKIPMSKGILLKRMQRLDQFQPDIIGIFLLSLIMLTLGIQVNRWLN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHC
NSWIDQITTSENIASQPSFLNDKKSSEDTELKSKVAFTQAVRLAQKAVAYGKIAKSKEEW
HHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
MAIAKIWEEAAELMASVSPSYSRHDVALDRAEIYQKNSDIAKTQVEKIVRGE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNQINDTFMQARQGNIAAIIQVMNENLAKLGVRIRAIFSDGVLQVLCEAPEPQHLEKSS
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
ILKEVKQTLEEISPRNIQQIEINSRIFKYPQLLWLEDITKNPDNKLLWSQKIILTKPNIF
HHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCHHH
KQIANNFYINKLKRTKIPMSKGILLKRMQRLDQFQPDIIGIFLLSLIMLTLGIQVNRWLN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHC
NSWIDQITTSENIASQPSFLNDKKSSEDTELKSKVAFTQAVRLAQKAVAYGKIAKSKEEW
HHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
MAIAKIWEEAAELMASVSPSYSRHDVALDRAEIYQKNSDIAKTQVEKIVRGE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA