Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474813

Identifier: 113474813

GI number: 113474813

Start: 1601167

End: 1601847

Strand: Direct

Name: 113474813

Synonym: Tery_1026

Alternate gene names: NA

Gene position: 1601167-1601847 (Clockwise)

Preceding gene: 113474811

Following gene: 113474814

Centisome position: 20.66

GC content: 32.01

Gene sequence:

>681_bases
ATGACATACAAACACAGTAAATTTACAAAAATTAGAATGGGTAATCAGCTAAATAAAATTTTGACTATTGTAATAGTTAC
CTGTACAAGTTTAATTTTTTTCAGCACTACAGAATTAGCAATGGCTCACCATCCAATGGGGGGTAAAATACCAGCTAATT
TTTGGGAAGGTTTAATTTCTGGTATGGGACATCCAATTATTGGCATAGATCATTTGTCTTTTGTCGTTGGAGTTGGATTA
ATTGCAGCAGGAATGTCTAACTCTATATTAGTTTTAGTATCTTTTCTGGCTACAGCAATGCTAGGAACAGGTATTCATCT
TCTTAGCATTGATTTACCTTTGACAGAAATAGCGATCGCTATTTCTGTGGTTGCTTTGGGTGCAATGTTAGCTTTCAAAC
AAAAACTAAATACTCCTTTAGTGATTATCTTTGCTGCTATTTCTGGTATATTTCATGGTTATGCTTATGGAGAAGCAATT
ATTGGTTCAGAAATGACTCCATTATTAGCATATTTGATAGGTTTTACTGCAATGCAATTATTCATAGCATTATTTGCAAT
GAAGTCTGCTGAATTAGTTAGTAGTTATTGGCAAAACCAATTTTTTAGATTAATGAGTTTTTTAGGTTTATTTATAAGTA
CTATTGGACTGGTGTTTTTCACAAAAGCTATTTTGAATTGA

Upstream 100 bases:

>100_bases
CCATGTCTCGTAAGAGTAGCATCAAGAGGATTTTATTGAAGCTATAATACCCAGCAAAATCAAAACAAAATTATTAAGAC
AATAAATCTACGAGGTTAGG

Downstream 100 bases:

>100_bases
TATTATGCATGGTTTTTAAGTTAGTAATGTATATTTTTTTTGCGTTGCGGAATAACCATAATACTCTAGAATTTAGTAGA
TAGAAACAAGTTTTTATATT

Product: HupE/UreJ protein

Products: NA

Alternate protein names: HupE/UreJ Protein; HupE / UreJ Protein; HupE/UreJ Family Protein; HupE / UreJ Family Protein; Hydrogenase Accessory Protein HupE / UreJ Protein; Hydrogenase Accessory Protein HupE/UreJ Protein

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTYKHSKFTKIRMGNQLNKILTIVIVTCTSLIFFSTTELAMAHHPMGGKIPANFWEGLISGMGHPIIGIDHLSFVVGVGL
IAAGMSNSILVLVSFLATAMLGTGIHLLSIDLPLTEIAIAISVVALGAMLAFKQKLNTPLVIIFAAISGIFHGYAYGEAI
IGSEMTPLLAYLIGFTAMQLFIALFAMKSAELVSSYWQNQFFRLMSFLGLFISTIGLVFFTKAILN

Sequences:

>Translated_226_residues
MTYKHSKFTKIRMGNQLNKILTIVIVTCTSLIFFSTTELAMAHHPMGGKIPANFWEGLISGMGHPIIGIDHLSFVVGVGL
IAAGMSNSILVLVSFLATAMLGTGIHLLSIDLPLTEIAIAISVVALGAMLAFKQKLNTPLVIIFAAISGIFHGYAYGEAI
IGSEMTPLLAYLIGFTAMQLFIALFAMKSAELVSSYWQNQFFRLMSFLGLFISTIGLVFFTKAILN
>Mature_225_residues
TYKHSKFTKIRMGNQLNKILTIVIVTCTSLIFFSTTELAMAHHPMGGKIPANFWEGLISGMGHPIIGIDHLSFVVGVGLI
AAGMSNSILVLVSFLATAMLGTGIHLLSIDLPLTEIAIAISVVALGAMLAFKQKLNTPLVIIFAAISGIFHGYAYGEAII
GSEMTPLLAYLIGFTAMQLFIALFAMKSAELVSSYWQNQFFRLMSFLGLFISTIGLVFFTKAILN

Specific function: Unknown

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24441; Mature: 24310

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYKHSKFTKIRMGNQLNKILTIVIVTCTSLIFFSTTELAMAHHPMGGKIPANFWEGLIS
CCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
GMGHPIIGIDHLSFVVGVGLIAAGMSNSILVLVSFLATAMLGTGIHLLSIDLPLTEIAIA
CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEECCCHHHHHHH
ISVVALGAMLAFKQKLNTPLVIIFAAISGIFHGYAYGEAIIGSEMTPLLAYLIGFTAMQL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FIALFAMKSAELVSSYWQNQFFRLMSFLGLFISTIGLVFFTKAILN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TYKHSKFTKIRMGNQLNKILTIVIVTCTSLIFFSTTELAMAHHPMGGKIPANFWEGLIS
CCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
GMGHPIIGIDHLSFVVGVGLIAAGMSNSILVLVSFLATAMLGTGIHLLSIDLPLTEIAIA
CCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEECCCHHHHHHH
ISVVALGAMLAFKQKLNTPLVIIFAAISGIFHGYAYGEAIIGSEMTPLLAYLIGFTAMQL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FIALFAMKSAELVSSYWQNQFFRLMSFLGLFISTIGLVFFTKAILN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA