Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474760

Identifier: 113474760

GI number: 113474760

Start: 1514703

End: 1515035

Strand: Reverse

Name: 113474760

Synonym: Tery_0961

Alternate gene names: NA

Gene position: 1515035-1514703 (Counterclockwise)

Preceding gene: 113474761

Following gene: 113474758

Centisome position: 19.55

GC content: 30.63

Gene sequence:

>333_bases
TTGACTCGCATTAACTTACCAACTCCCGATAACTTTCCCACTCCCAAAACAAAATTTAAAGTAGATAAAAATAACCACAA
AATCTTTATAGATACTTTGACAATATTAGAAAAAATTCCCAAAATTGCCTGGGAATATTGCCTCGGAAACCGGAGTGCTT
TGGAGTGGGTATTAGATCAATATAAAGAGAAAAAGTCTAAAGATAAAACCATCACTGAAAAATTTGATACTTATTGTTTT
GCTAACTATAAAGAAACAGTTATTGACCTACTACAAAAAGTTGATAATGTTAGTGTCGAAACTATGAAAATTATTCAGAT
AATGGAAACTTGA

Upstream 100 bases:

>100_bases
TCCCTGACTCCCCTTCTATGAAAATTTTAAACAGTGGGTAAAATGGGAAAAAAAATTAATCGAAGTACACATCAATTATG
AAAATATTAAACCTTTTTTA

Downstream 100 bases:

>100_bases
ATAGAAGTTACCTCTCCACATTTTTCCCAGAAATCTATAAATTACTACGCAAAAATTTCTATGGTATATAGAGCAATAGA
ACATTAACTTAATATTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: Adenine Specific DNA Methyltransferase; Helicase

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTRINLPTPDNFPTPKTKFKVDKNNHKIFIDTLTILEKIPKIAWEYCLGNRSALEWVLDQYKEKKSKDKTITEKFDTYCF
ANYKETVIDLLQKVDNVSVETMKIIQIMET

Sequences:

>Translated_110_residues
MTRINLPTPDNFPTPKTKFKVDKNNHKIFIDTLTILEKIPKIAWEYCLGNRSALEWVLDQYKEKKSKDKTITEKFDTYCF
ANYKETVIDLLQKVDNVSVETMKIIQIMET
>Mature_109_residues
TRINLPTPDNFPTPKTKFKVDKNNHKIFIDTLTILEKIPKIAWEYCLGNRSALEWVLDQYKEKKSKDKTITEKFDTYCFA
NYKETVIDLLQKVDNVSVETMKIIQIMET

Specific function: Unknown

COG id: COG4889

COG function: function code R; Predicted helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12991; Mature: 12860

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRINLPTPDNFPTPKTKFKVDKNNHKIFIDTLTILEKIPKIAWEYCLGNRSALEWVLDQ
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YKEKKSKDKTITEKFDTYCFANYKETVIDLLQKVDNVSVETMKIIQIMET
HHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TRINLPTPDNFPTPKTKFKVDKNNHKIFIDTLTILEKIPKIAWEYCLGNRSALEWVLDQ
CCCCCCCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YKEKKSKDKTITEKFDTYCFANYKETVIDLLQKVDNVSVETMKIIQIMET
HHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA