Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474719

Identifier: 113474719

GI number: 113474719

Start: 1435221

End: 1435445

Strand: Direct

Name: 113474719

Synonym: Tery_0908

Alternate gene names: NA

Gene position: 1435221-1435445 (Clockwise)

Preceding gene: 113474718

Following gene: 113474720

Centisome position: 18.52

GC content: 38.67

Gene sequence:

>225_bases
ATGTTTGGAAAATTCAGCCCCAGGAAAAGCGCGAGTTATACTACCCTCCCAGGAAAAGCGGGAGTTATACTACTCTTTCG
CGAAGTAACAGAAAAAATTGAACTCGATCCAGATGATACTCCCGTTGCCAAAATAAAAGTTAGTCTCACAAGAACATTGC
CAAAAGCAAAATCTAAACAACCCATTTCCTTTTCTCAAATGTGGAAGGAAATAGATATCGAATAA

Upstream 100 bases:

>100_bases
ATTTACCGTAAATACCAACTACTATCATAAAAAAAACAAATGAAAGTCATTGAAGTAACAGGAACTTTTAACAAAAAAGG
GCAATGATTCTTCGATCGCC

Downstream 100 bases:

>100_bases
TATTCCTGTAGTTGAGATTGACTTAAAACCTAAAAAGAATAAGAAATCTGCGGAAACTCTTCCCAAAATATCCTCCTATT
GAGCTTAGATACTCAACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MFGKFSPRKSASYTTLPGKAGVILLFREVTEKIELDPDDTPVAKIKVSLTRTLPKAKSKQPISFSQMWKEIDIE

Sequences:

>Translated_74_residues
MFGKFSPRKSASYTTLPGKAGVILLFREVTEKIELDPDDTPVAKIKVSLTRTLPKAKSKQPISFSQMWKEIDIE
>Mature_74_residues
MFGKFSPRKSASYTTLPGKAGVILLFREVTEKIELDPDDTPVAKIKVSLTRTLPKAKSKQPISFSQMWKEIDIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8340; Mature: 8340

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKFSPRKSASYTTLPGKAGVILLFREVTEKIELDPDDTPVAKIKVSLTRTLPKAKSKQ
CCCCCCCCCCCCEEECCCCCCEEEEEEHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCC
PISFSQMWKEIDIE
CCCHHHHHHHCCCC
>Mature Secondary Structure
MFGKFSPRKSASYTTLPGKAGVILLFREVTEKIELDPDDTPVAKIKVSLTRTLPKAKSKQ
CCCCCCCCCCCCEEECCCCCCEEEEEEHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCC
PISFSQMWKEIDIE
CCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA