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The map label for this gene is cbiD [H]

Identifier: 113474717

GI number: 113474717

Start: 1430592

End: 1431749

Strand: Direct

Name: cbiD [H]

Synonym: Tery_0905

Alternate gene names: 113474717

Gene position: 1430592-1431749 (Clockwise)

Preceding gene: 113474715

Following gene: 113474718

Centisome position: 18.46

GC content: 38.51

Gene sequence:

>1158_bases
ATGACTGAACCTATTGCTGAACCTATTGCTGGATATACTTTACCTGTATTTGCTTGTGCTGCTGCCGTAGCTGCTCTAGG
TTGGCTACGTCAAAATGTTTCCTCTTCATCTACTGTATCAATTAACTTACTAGAACCAAGAGAAATTGTTGATATTCCTA
TCCAACAGGTAGCTTTACTGAAAAATAATACTGCTTTAGCCGTTACTCGTTCCGATCCCGGTAATAATCTTGACCTAACT
CATAATACTCCTATTTGGGCTATGGTAGAATTGGTAAAAGTTTGCCAAACTGACACTTCAGAAAAAATTGTGATTATAGG
TGGAGAAGGAATAGGATATGATATTAATAGTAGAGAAGCAGCTATATATAATTATGCCCAACGACTGCTCCAAGAAAATC
TTCAACCCTTGCTCAAGCAAAATGAACAAGTTATAGTCACTATTATCCTACCAGAGGGTCGTCAATTAGCGGCTCGGACT
TCTAATTCTGCTTTTGGTATAGTTGAAGGTCTTTCTTTGTTAGGGACTACTGGGGTTTCTCAACCTTTAAGTGTGCCTGG
ACAACTTGAAGTTTACCAAGAGGAACTACAACAAAAGGCGGCGCAGTTTCAGAGTTTGGTGTTTTGTGTAGGGGAAAATG
GTCTAGATATAGCCAGGAAAATGGGTATCTCTCCACAGCAGACCGTCAAAACAGCTAACTGGTTGGGCCCAATGTTAGTT
GCTGCTGCTATTGCTGGAGTGGAGTATATTCTATTGTTAGGCTATCATGGTAAATTAATTAAGTTGGCTGGTGGAATTTT
TCATACTCATCACCATTTAGCTGATGGACGATTAGAAATTTTAACAGCTCACTGTGCAAATATAGGTGTACCTACTTCTG
TAGTACAAAAAATTTTTGCTTGTCCTACAGCTGAGAGTGCTTTGAAGCTGCTGCGGAGTATAGATACAAATCAGAAAAAT
GATTTGGTAGGTAAGGTTTATGGAGCGATCGCTTCAAAAATTGACCAACGTTGTCAAGCTTATATTTTTAATCATAGCCA
AAAGCAAGTCCAAGTAGGTTCGATGTTATTTGACCGCGATCGGCAAATTTTCCTCAAAACTAAAGTTGCGGATCAAGTTT
TTTCCCAAATTTTTTCCTTTGAAGATCATAAAAAATAA

Upstream 100 bases:

>100_bases
ACTTCAATATCCTCTAAGAGATTAATTAACATTTTGACAGACGACAAATTTCAACACTGACCTAATTAATAAATAACTAA
TAACTAATAACTAATAACTG

Downstream 100 bases:

>100_bases
AGAGTAGAAATTTTAAATAGTCAAGTTTAAGTTAGCTGGGGACCAACTAATAATAACTGTTATTTAAGTTGGCTAAAAGA
ACTCAATAGTGTTTTAGTAA

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MTEPIAEPIAGYTLPVFACAAAVAALGWLRQNVSSSSTVSINLLEPREIVDIPIQQVALLKNNTALAVTRSDPGNNLDLT
HNTPIWAMVELVKVCQTDTSEKIVIIGGEGIGYDINSREAAIYNYAQRLLQENLQPLLKQNEQVIVTIILPEGRQLAART
SNSAFGIVEGLSLLGTTGVSQPLSVPGQLEVYQEELQQKAAQFQSLVFCVGENGLDIARKMGISPQQTVKTANWLGPMLV
AAAIAGVEYILLLGYHGKLIKLAGGIFHTHHHLADGRLEILTAHCANIGVPTSVVQKIFACPTAESALKLLRSIDTNQKN
DLVGKVYGAIASKIDQRCQAYIFNHSQKQVQVGSMLFDRDRQIFLKTKVADQVFSQIFSFEDHKK

Sequences:

>Translated_385_residues
MTEPIAEPIAGYTLPVFACAAAVAALGWLRQNVSSSSTVSINLLEPREIVDIPIQQVALLKNNTALAVTRSDPGNNLDLT
HNTPIWAMVELVKVCQTDTSEKIVIIGGEGIGYDINSREAAIYNYAQRLLQENLQPLLKQNEQVIVTIILPEGRQLAART
SNSAFGIVEGLSLLGTTGVSQPLSVPGQLEVYQEELQQKAAQFQSLVFCVGENGLDIARKMGISPQQTVKTANWLGPMLV
AAAIAGVEYILLLGYHGKLIKLAGGIFHTHHHLADGRLEILTAHCANIGVPTSVVQKIFACPTAESALKLLRSIDTNQKN
DLVGKVYGAIASKIDQRCQAYIFNHSQKQVQVGSMLFDRDRQIFLKTKVADQVFSQIFSFEDHKK
>Mature_384_residues
TEPIAEPIAGYTLPVFACAAAVAALGWLRQNVSSSSTVSINLLEPREIVDIPIQQVALLKNNTALAVTRSDPGNNLDLTH
NTPIWAMVELVKVCQTDTSEKIVIIGGEGIGYDINSREAAIYNYAQRLLQENLQPLLKQNEQVIVTIILPEGRQLAARTS
NSAFGIVEGLSLLGTTGVSQPLSVPGQLEVYQEELQQKAAQFQSLVFCVGENGLDIARKMGISPQQTVKTANWLGPMLVA
AAIAGVEYILLLGYHGKLIKLAGGIFHTHHHLADGRLEILTAHCANIGVPTSVVQKIFACPTAESALKLLRSIDTNQKND
LVGKVYGAIASKIDQRCQAYIFNHSQKQVQVGSMLFDRDRQIFLKTKVADQVFSQIFSFEDHKK

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 41950; Mature: 41819

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPIAEPIAGYTLPVFACAAAVAALGWLRQNVSSSSTVSINLLEPREIVDIPIQQVALL
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCHHHHHHE
KNNTALAVTRSDPGNNLDLTHNTPIWAMVELVKVCQTDTSEKIVIIGGEGIGYDINSREA
ECCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHH
AIYNYAQRLLQENLQPLLKQNEQVIVTIILPEGRQLAARTSNSAFGIVEGLSLLGTTGVS
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEHHCCCCCCHHHHHHHHHHHCCCCC
QPLSVPGQLEVYQEELQQKAAQFQSLVFCVGENGLDIARKMGISPQQTVKTANWLGPMLV
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
AAAIAGVEYILLLGYHGKLIKLAGGIFHTHHHLADGRLEILTAHCANIGVPTSVVQKIFA
HHHHHHHHEEEEECCCCCHHHHHCHHHHHHHHCCCCCEEEEEEHHHCCCCCHHHHHHHHC
CPTAESALKLLRSIDTNQKNDLVGKVYGAIASKIDQRCQAYIFNHSQKQVQVGSMLFDRD
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
RQIFLKTKVADQVFSQIFSFEDHKK
CEEEEHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TEPIAEPIAGYTLPVFACAAAVAALGWLRQNVSSSSTVSINLLEPREIVDIPIQQVALL
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCHHHHHHE
KNNTALAVTRSDPGNNLDLTHNTPIWAMVELVKVCQTDTSEKIVIIGGEGIGYDINSREA
ECCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHH
AIYNYAQRLLQENLQPLLKQNEQVIVTIILPEGRQLAARTSNSAFGIVEGLSLLGTTGVS
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEHHCCCCCCHHHHHHHHHHHCCCCC
QPLSVPGQLEVYQEELQQKAAQFQSLVFCVGENGLDIARKMGISPQQTVKTANWLGPMLV
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
AAAIAGVEYILLLGYHGKLIKLAGGIFHTHHHLADGRLEILTAHCANIGVPTSVVQKIFA
HHHHHHHHEEEEECCCCCHHHHHCHHHHHHHHCCCCCEEEEEEHHHCCCCCHHHHHHHHC
CPTAESALKLLRSIDTNQKNDLVGKVYGAIASKIDQRCQAYIFNHSQKQVQVGSMLFDRD
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
RQIFLKTKVADQVFSQIFSFEDHKK
CEEEEHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA