Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474687

Identifier: 113474687

GI number: 113474687

Start: 1381500

End: 1382981

Strand: Direct

Name: 113474687

Synonym: Tery_0870

Alternate gene names: NA

Gene position: 1381500-1382981 (Clockwise)

Preceding gene: 113474686

Following gene: 113474689

Centisome position: 17.83

GC content: 32.32

Gene sequence:

>1482_bases
ATGCAACCAATATCTCATCAATCAAATAAATGGTTTGTTATTGGAATAGCTAGCATATTTCTATTTTCAGCAATTCTGAG
ATTTTGGCAATTAGGTCGTTTTAATACCCTCGTTTTTGACGAGGTTTATTATGCTAAATTTGCTAATAACTATCTTACTC
AAACTGAATTTTTTAACGCCCATCCTCCCCTCAGTCAATATATAATTGCAATTGGTATTTGGATAGGTTCTCATTTACCC
TTTGGGCAAGAAATAGTTAATAATGAAACAGGTTCTACTTTAGCCGCTTGGAGTTATCGGTGGGTAAATGCTTTAACAGG
TTCATTTATTCCTCTGGTAGTGGGAGCGATCGCCTATAAATTAACACACCGTTGGAGTTATAGTTTGATAGCTACTTTAC
TCATGGCTTTAGACGGATTATTTTTAGTTGAGTCTCGTTATGCTCTGAATAATATTTATCTAGTAATTTTTGGATTATTA
GCTCATTTGTGTTTAATTGTTGCTCTACAAAATAATCAATTAAAACAAAAAAAATGGTTAGTTTTATCAGGAATATTTTT
TGGTGCAAGTACAGCGATAAAATGGAATGGTTTGGGATTTTTGTTAGGCATTTATTTACTCTGGATATTGGTATGGATAA
TTAAATTTTTTATTCAACAAAAAAAATATGAATATACATCTGCTTGGCAAAATTTAACTCGAATCAATCTGATTCAATTA
ATTCTAAACTTATTCATTATTCCCATAATTACCTATAGTTTACTGTGGATTCCCCACATTATTCTCAACCCTAAATACGG
TTTTTTAGAAATGCAGGAACAGATTTTCAGCTATCACCAAAGAATTGGTAGTGGAGCTGATATTCATCCTTATTGCGCTC
AATGGTTTACCTGGCCCTTAATGATGAGACCTGTAGTTTATTTTTATAAGAATACGGGTTTACTAGACAAACCAGAACCT
TCTTTAGCAACACTATATTCAGATATTATATCTCCCCAACTTAATCCTATAATTTTTGATGTTCATGCCATGGGAAATCC
TATTCTTTGGTGGTTCTCAACATGGGGAATTTTATTATTAATCTTGATGTTATTTAATCGTGTTTGGCATTGGGAAAAAA
ATAGACAAGCTAGGCGTAAAAAAATCAAATTAAACCATCTTTTTAAATTCCCACCTCCCTCAGAAATGTGGTTATTACTA
TATTTAGTTATAAATTGGCTAAGTAATTTTATGCCTTGGAGTAGAGTAAGTCGTTGTACTTTTTTGTATCATTATATGGG
AGCTTTAGTATTTGCTATTTTGGGGTTTTCTTGGTGCTTAGATAGGTGGTTAAATAGTCAGCAAGCTTCCTTGAGAATAA
TGGGAGTCACAATGATTTTTATAGTTTTATTTGCCTTTGTTTTTTGGATGCCTATTTATTTAGGATTACCTTTATCTCCC
CAAAATTGGCAGTTCAGAATGTGGTTTCGGTCTTGGATTTAA

Upstream 100 bases:

>100_bases
AACAGCCCTATTTGTTTGAAATAAAGGGGCTGTTTTTTATTGATTTTTACTAAACTTAGAAGTCAGTCAAACTCAATTAT
ACTCAATTACCTAACAATTT

Downstream 100 bases:

>100_bases
TTAAATATTAGCTCTTAGTATTTTCGTACCAAAATTATACTATTTATCAAAAACTTTTCTACATTTCCCCATAGCAGATA
ACCCACCTCTGACCTTTAAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; Integral Membrane Protein; Dolichyl-Phosphate-Mannose-Protein O-Mannosyl Transferase; Family; Olichyl-Phosphate-Mannose-Protein Mannosyltransferase; Glycosyltransferase; Glycosyl Transferase

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MQPISHQSNKWFVIGIASIFLFSAILRFWQLGRFNTLVFDEVYYAKFANNYLTQTEFFNAHPPLSQYIIAIGIWIGSHLP
FGQEIVNNETGSTLAAWSYRWVNALTGSFIPLVVGAIAYKLTHRWSYSLIATLLMALDGLFLVESRYALNNIYLVIFGLL
AHLCLIVALQNNQLKQKKWLVLSGIFFGASTAIKWNGLGFLLGIYLLWILVWIIKFFIQQKKYEYTSAWQNLTRINLIQL
ILNLFIIPIITYSLLWIPHIILNPKYGFLEMQEQIFSYHQRIGSGADIHPYCAQWFTWPLMMRPVVYFYKNTGLLDKPEP
SLATLYSDIISPQLNPIIFDVHAMGNPILWWFSTWGILLLILMLFNRVWHWEKNRQARRKKIKLNHLFKFPPPSEMWLLL
YLVINWLSNFMPWSRVSRCTFLYHYMGALVFAILGFSWCLDRWLNSQQASLRIMGVTMIFIVLFAFVFWMPIYLGLPLSP
QNWQFRMWFRSWI

Sequences:

>Translated_493_residues
MQPISHQSNKWFVIGIASIFLFSAILRFWQLGRFNTLVFDEVYYAKFANNYLTQTEFFNAHPPLSQYIIAIGIWIGSHLP
FGQEIVNNETGSTLAAWSYRWVNALTGSFIPLVVGAIAYKLTHRWSYSLIATLLMALDGLFLVESRYALNNIYLVIFGLL
AHLCLIVALQNNQLKQKKWLVLSGIFFGASTAIKWNGLGFLLGIYLLWILVWIIKFFIQQKKYEYTSAWQNLTRINLIQL
ILNLFIIPIITYSLLWIPHIILNPKYGFLEMQEQIFSYHQRIGSGADIHPYCAQWFTWPLMMRPVVYFYKNTGLLDKPEP
SLATLYSDIISPQLNPIIFDVHAMGNPILWWFSTWGILLLILMLFNRVWHWEKNRQARRKKIKLNHLFKFPPPSEMWLLL
YLVINWLSNFMPWSRVSRCTFLYHYMGALVFAILGFSWCLDRWLNSQQASLRIMGVTMIFIVLFAFVFWMPIYLGLPLSP
QNWQFRMWFRSWI
>Mature_493_residues
MQPISHQSNKWFVIGIASIFLFSAILRFWQLGRFNTLVFDEVYYAKFANNYLTQTEFFNAHPPLSQYIIAIGIWIGSHLP
FGQEIVNNETGSTLAAWSYRWVNALTGSFIPLVVGAIAYKLTHRWSYSLIATLLMALDGLFLVESRYALNNIYLVIFGLL
AHLCLIVALQNNQLKQKKWLVLSGIFFGASTAIKWNGLGFLLGIYLLWILVWIIKFFIQQKKYEYTSAWQNLTRINLIQL
ILNLFIIPIITYSLLWIPHIILNPKYGFLEMQEQIFSYHQRIGSGADIHPYCAQWFTWPLMMRPVVYFYKNTGLLDKPEP
SLATLYSDIISPQLNPIIFDVHAMGNPILWWFSTWGILLLILMLFNRVWHWEKNRQARRKKIKLNHLFKFPPPSEMWLLL
YLVINWLSNFMPWSRVSRCTFLYHYMGALVFAILGFSWCLDRWLNSQQASLRIMGVTMIFIVLFAFVFWMPIYLGLPLSP
QNWQFRMWFRSWI

Specific function: Unknown

COG id: COG1928

COG function: function code O; Dolichyl-phosphate-mannose--protein O-mannosyl transferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209870082, Length=262, Percent_Identity=24.4274809160305, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI116517317, Length=262, Percent_Identity=24.4274809160305, Blast_Score=67, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6321638, Length=262, Percent_Identity=25.5725190839695, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24662757, Length=201, Percent_Identity=27.363184079602, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58115; Mature: 58115

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPISHQSNKWFVIGIASIFLFSAILRFWQLGRFNTLVFDEVYYAKFANNYLTQTEFFNA
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCCC
HPPLSQYIIAIGIWIGSHLPFGQEIVNNETGSTLAAWSYRWVNALTGSFIPLVVGAIAYK
CCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
LTHRWSYSLIATLLMALDGLFLVESRYALNNIYLVIFGLLAHLCLIVALQNNQLKQKKWL
HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VLSGIFFGASTAIKWNGLGFLLGIYLLWILVWIIKFFIQQKKYEYTSAWQNLTRINLIQL
HEEHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILNLFIIPIITYSLLWIPHIILNPKYGFLEMQEQIFSYHQRIGSGADIHPYCAQWFTWPL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MMRPVVYFYKNTGLLDKPEPSLATLYSDIISPQLNPIIFDVHAMGNPILWWFSTWGILLL
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
ILMLFNRVWHWEKNRQARRKKIKLNHLFKFPPPSEMWLLLYLVINWLSNFMPWSRVSRCT
HHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
FLYHYMGALVFAILGFSWCLDRWLNSQQASLRIMGVTMIFIVLFAFVFWMPIYLGLPLSP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QNWQFRMWFRSWI
CCCEEEHHHHHCC
>Mature Secondary Structure
MQPISHQSNKWFVIGIASIFLFSAILRFWQLGRFNTLVFDEVYYAKFANNYLTQTEFFNA
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCCC
HPPLSQYIIAIGIWIGSHLPFGQEIVNNETGSTLAAWSYRWVNALTGSFIPLVVGAIAYK
CCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
LTHRWSYSLIATLLMALDGLFLVESRYALNNIYLVIFGLLAHLCLIVALQNNQLKQKKWL
HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VLSGIFFGASTAIKWNGLGFLLGIYLLWILVWIIKFFIQQKKYEYTSAWQNLTRINLIQL
HEEHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILNLFIIPIITYSLLWIPHIILNPKYGFLEMQEQIFSYHQRIGSGADIHPYCAQWFTWPL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MMRPVVYFYKNTGLLDKPEPSLATLYSDIISPQLNPIIFDVHAMGNPILWWFSTWGILLL
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
ILMLFNRVWHWEKNRQARRKKIKLNHLFKFPPPSEMWLLLYLVINWLSNFMPWSRVSRCT
HHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
FLYHYMGALVFAILGFSWCLDRWLNSQQASLRIMGVTMIFIVLFAFVFWMPIYLGLPLSP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QNWQFRMWFRSWI
CCCEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA