Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474685

Identifier: 113474685

GI number: 113474685

Start: 1376791

End: 1377237

Strand: Direct

Name: 113474685

Synonym: Tery_0868

Alternate gene names: NA

Gene position: 1376791-1377237 (Clockwise)

Preceding gene: 113474684

Following gene: 113474686

Centisome position: 17.76

GC content: 33.56

Gene sequence:

>447_bases
TTGGATAATAACTCAGATACTTATGGCAGAACTATTTATTTAGGTGCTTCTCGACGTCGCCTTGAAGATGCTGAAGCGCT
CTATAATCAAGAACGTTGGAATGGTGCTATTTACATGGGTGGTTATGCTATTGAATGCGCTCTCAAATCTCTCCTTTGTC
ATGAGGAAGACATAGTGAATTTTAAGAAGACAAAAGTATTTAAGCGCTTAAAAGGTTCAAATTTACATGATTTAGAACAG
CTATTAGAAGCTTCGTATATATGTAAAGGAGTTAAAGATTCAAAAAAAGATCAATCTCTTAAAAAGGCATGGGACACAGT
TAAATTATGGCAAAATGATAAGTTACGATACTCAGATAAAAAGGGTGATAAAATTGAGGCTAGCAAGTTTATTTATGCAG
TAAAAATACTACATGGATATTTCTTGGCAAAACTACAAGCTTATTGA

Upstream 100 bases:

>100_bases
GAATAAAACTATAATTTTTGCCAATAATTAAGGATATTGAGGGTATTGTTATTGGGTAGTTTCTTAAGCAAAAATTTTAC
ATTACAGGAGGTAGATTTTT

Downstream 100 bases:

>100_bases
TGCAGTAAAAAAACTACATAGATATTTATTGAGCAAACAAGGAGAAGGCTAATGACGGATAGAAAACTCTTAATGGAACA
AATTCAGGACCACCTAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDNNSDTYGRTIYLGASRRRLEDAEALYNQERWNGAIYMGGYAIECALKSLLCHEEDIVNFKKTKVFKRLKGSNLHDLEQ
LLEASYICKGVKDSKKDQSLKKAWDTVKLWQNDKLRYSDKKGDKIEASKFIYAVKILHGYFLAKLQAY

Sequences:

>Translated_148_residues
MDNNSDTYGRTIYLGASRRRLEDAEALYNQERWNGAIYMGGYAIECALKSLLCHEEDIVNFKKTKVFKRLKGSNLHDLEQ
LLEASYICKGVKDSKKDQSLKKAWDTVKLWQNDKLRYSDKKGDKIEASKFIYAVKILHGYFLAKLQAY
>Mature_148_residues
MDNNSDTYGRTIYLGASRRRLEDAEALYNQERWNGAIYMGGYAIECALKSLLCHEEDIVNFKKTKVFKRLKGSNLHDLEQ
LLEASYICKGVKDSKKDQSLKKAWDTVKLWQNDKLRYSDKKGDKIEASKFIYAVKILHGYFLAKLQAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17184; Mature: 17184

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNSDTYGRTIYLGASRRRLEDAEALYNQERWNGAIYMGGYAIECALKSLLCHEEDIVN
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCHHHHHH
FKKTKVFKRLKGSNLHDLEQLLEASYICKGVKDSKKDQSLKKAWDTVKLWQNDKLRYSDK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCC
KGDKIEASKFIYAVKILHGYFLAKLQAY
CCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNNSDTYGRTIYLGASRRRLEDAEALYNQERWNGAIYMGGYAIECALKSLLCHEEDIVN
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCHHHHHH
FKKTKVFKRLKGSNLHDLEQLLEASYICKGVKDSKKDQSLKKAWDTVKLWQNDKLRYSDK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCC
KGDKIEASKFIYAVKILHGYFLAKLQAY
CCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA