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The map label for this gene is 113474490

Identifier: 113474490

GI number: 113474490

Start: 1039586

End: 1040161

Strand: Direct

Name: 113474490

Synonym: Tery_0637

Alternate gene names: NA

Gene position: 1039586-1040161 (Clockwise)

Preceding gene: 113474489

Following gene: 113474491

Centisome position: 13.41

GC content: 32.64

Gene sequence:

>576_bases
ATGAACAAATTATTTGAAAGATTGAATGCCCAGGTTACAATTTTGGGAAGCATTATTGCTATTCTTTGGATTGTACAAAT
TATTAATGCAGAACTTTTAGGAGGAAAACTGAATTATTATGGAGGAATTCATCCTCAAAGTTCTATTGGGATTACTAATA
TTTTTTCTGCTCCATTTTTGCATGGTAGTTATACTCACTTAATAGCTAATATTGTACCACTAATTACTCTGGGATGGTTA
ATCATGTTACGGGGATTTAGTGATTTTTTCTTCGTGAGTATTGTTACTATAATTATTAGTGGTCTAGGTATTTGGTGCTT
TGGTTCTCCAGATTCTATTCATATCGGTGCTAGTGGATTAATTTTTGGTTATTTTGGTTTTTTATTACTCCGAAGTATAT
TTGACTTTAGCATTTTATCAGTTATATTTGCCTTGACTGCTGGTTTTCTTTACAGTGGTTTAATTTGGGGTATTTTACCT
TCTGATCCTAATATATCCTGGGAGGCACACTTATTTGGTTTTCTCGGTGGGATATTTGCAGCTCAAATATTAGGGAAACG
CAAAAGGAATAAGTAA

Upstream 100 bases:

>100_bases
CAGAGTGCCTCAAACCTATTCTCTTTTTAATAGTACTCGGTTTTTATACTCCATATAAAAACTTTACATATTAACAAGAT
ATAAACTATAACTAAAACAA

Downstream 100 bases:

>100_bases
GCATTTAGCTATTGGTAATTAACATTTTATTCTGAACAGAACCATAAATAAAATAAGTAAACACTGATTTACTTTGAGAT
AACTTACCCAAAAACTGAAT

Product: rhomboid-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNKLFERLNAQVTILGSIIAILWIVQIINAELLGGKLNYYGGIHPQSSIGITNIFSAPFLHGSYTHLIANIVPLITLGWL
IMLRGFSDFFFVSIVTIIISGLGIWCFGSPDSIHIGASGLIFGYFGFLLLRSIFDFSILSVIFALTAGFLYSGLIWGILP
SDPNISWEAHLFGFLGGIFAAQILGKRKRNK

Sequences:

>Translated_191_residues
MNKLFERLNAQVTILGSIIAILWIVQIINAELLGGKLNYYGGIHPQSSIGITNIFSAPFLHGSYTHLIANIVPLITLGWL
IMLRGFSDFFFVSIVTIIISGLGIWCFGSPDSIHIGASGLIFGYFGFLLLRSIFDFSILSVIFALTAGFLYSGLIWGILP
SDPNISWEAHLFGFLGGIFAAQILGKRKRNK
>Mature_191_residues
MNKLFERLNAQVTILGSIIAILWIVQIINAELLGGKLNYYGGIHPQSSIGITNIFSAPFLHGSYTHLIANIVPLITLGWL
IMLRGFSDFFFVSIVTIIISGLGIWCFGSPDSIHIGASGLIFGYFGFLLLRSIFDFSILSVIFALTAGFLYSGLIWGILP
SDPNISWEAHLFGFLGGIFAAQILGKRKRNK

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1171 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022764 [H]

Pfam domain/function: PF01694 Rhomboid [H]

EC number: NA

Molecular weight: Translated: 20969; Mature: 20969

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLFERLNAQVTILGSIIAILWIVQIINAELLGGKLNYYGGIHPQSSIGITNIFSAPFL
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCC
HGSYTHLIANIVPLITLGWLIMLRGFSDFFFVSIVTIIISGLGIWCFGSPDSIHIGASGL
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCEEECCHHH
IFGYFGFLLLRSIFDFSILSVIFALTAGFLYSGLIWGILPSDPNISWEAHLFGFLGGIFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AQILGKRKRNK
HHHHHHHHCCC
>Mature Secondary Structure
MNKLFERLNAQVTILGSIIAILWIVQIINAELLGGKLNYYGGIHPQSSIGITNIFSAPFL
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCC
HGSYTHLIANIVPLITLGWLIMLRGFSDFFFVSIVTIIISGLGIWCFGSPDSIHIGASGL
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCEEECCHHH
IFGYFGFLLLRSIFDFSILSVIFALTAGFLYSGLIWGILPSDPNISWEAHLFGFLGGIFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AQILGKRKRNK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]