Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474491

Identifier: 113474491

GI number: 113474491

Start: 1041012

End: 1041449

Strand: Direct

Name: 113474491

Synonym: Tery_0638

Alternate gene names: NA

Gene position: 1041012-1041449 (Clockwise)

Preceding gene: 113474490

Following gene: 113474493

Centisome position: 13.43

GC content: 37.67

Gene sequence:

>438_bases
ATGAATTTACCTTCTTTTCTGTGGCTTTGGAAAATAGCAGCTTGGTCTATGGGTTTTTCCCTGTTTACCTATTCATTATT
AGCTGTAAGTGGCGGCTGGATGTTTTTTGCTCGCAACAACAAACAAAAACGCCCTAAATGGTTACGACCCTTTCATTATA
TTATCGGAGGAGTAATGGTATTTTTAGTAGTTTTATTACTGATAATTGGCTTAGTAGGGACTCTTGGCTATTATGGTAAC
TTAGGTCATTCTGCTCATTTACCTGCTGGTTTAATTGTTGTGACATTGGCGTTAGTTTCTGCCTGGAGTGGAACTCAAAT
TAATCCCAAAAAACCTTGGGTGCGATCGCTACATATCACAACTAATATTATCCTATTATTTAGTTTCACGACAGTATCTT
TGACAGGTTGGAGCGTTGTGCAGAAATATTTACCTTGA

Upstream 100 bases:

>100_bases
TTTTTCCCAGTTCAAAAAAAATTATCCTTTTATGTGAAGGGGAAAAAAATCTTTGATGAAGTTCTGTTCTATCAAACTCT
CTAATTAAAAGTAATTATAT

Downstream 100 bases:

>100_bases
AGTAAGTTTTATACAATAGCCTTTAGAGTCTTTGGATAGCTTTGTTAAGTATGATGAGAGAAAGATATTTAATTTTTCCA
TATACTAAATTTCTCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNLPSFLWLWKIAAWSMGFSLFTYSLLAVSGGWMFFARNNKQKRPKWLRPFHYIIGGVMVFLVVLLLIIGLVGTLGYYGN
LGHSAHLPAGLIVVTLALVSAWSGTQINPKKPWVRSLHITTNIILLFSFTTVSLTGWSVVQKYLP

Sequences:

>Translated_145_residues
MNLPSFLWLWKIAAWSMGFSLFTYSLLAVSGGWMFFARNNKQKRPKWLRPFHYIIGGVMVFLVVLLLIIGLVGTLGYYGN
LGHSAHLPAGLIVVTLALVSAWSGTQINPKKPWVRSLHITTNIILLFSFTTVSLTGWSVVQKYLP
>Mature_145_residues
MNLPSFLWLWKIAAWSMGFSLFTYSLLAVSGGWMFFARNNKQKRPKWLRPFHYIIGGVMVFLVVLLLIIGLVGTLGYYGN
LGHSAHLPAGLIVVTLALVSAWSGTQINPKKPWVRSLHITTNIILLFSFTTVSLTGWSVVQKYLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16281; Mature: 16281

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPSFLWLWKIAAWSMGFSLFTYSLLAVSGGWMFFARNNKQKRPKWLRPFHYIIGGVMV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
FLVVLLLIIGLVGTLGYYGNLGHSAHLPAGLIVVTLALVSAWSGTQINPKKPWVRSLHIT
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
TNIILLFSFTTVSLTGWSVVQKYLP
HHHHHEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLPSFLWLWKIAAWSMGFSLFTYSLLAVSGGWMFFARNNKQKRPKWLRPFHYIIGGVMV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
FLVVLLLIIGLVGTLGYYGNLGHSAHLPAGLIVVTLALVSAWSGTQINPKKPWVRSLHIT
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
TNIILLFSFTTVSLTGWSVVQKYLP
HHHHHEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA