Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474470

Identifier: 113474470

GI number: 113474470

Start: 995266

End: 996087

Strand: Direct

Name: 113474470

Synonym: Tery_0614

Alternate gene names: NA

Gene position: 995266-996087 (Clockwise)

Preceding gene: 113474469

Following gene: 113474471

Centisome position: 12.84

GC content: 31.02

Gene sequence:

>822_bases
ATGACAAAATATAGACTCTCTCAACAACACCTAAATTTACTGACAACTTGTCCTCGCAAATTCCAATACCTCTACCTAGA
TAATTTAAGTGTACCGACAACACTCATAGAGCAAGAAAGAATCAATTGGGGAAGCCAGTTTCACTTATTAATGCAACAAA
GAGAATTAGGATTACCAATAGAATCTTTGATAGTAGAAAATCAAGAAATGCAGCATTGTTTTGAAAATTTTTTCCAAGCT
GCACCAGAAATATTAAATTTTGACACTCAAGATGGTTTAATCTTACGTCAAGCTGAGTATAATCGTAGCATTAATTTTAA
TGGCTATATTCTGACAGTTATTTATGATTTATTAATTACTAATTTTCAACAAGCACAAATTTTTGATTGGAAAACTTATA
GCTACCCTCAAAACAAAGAAAAAATAGCTGAAAACTGGCAAACACGTCTCTATCTTTATACACTAGTGAAAACAAGTAAC
TATTTGCCAGAAGAAGTTTCGATGAACTATTGGTTTATCCCACCAAAAAATAAACAACTACCCTATAAATGGAAGTTTTC
TTATAATCAAAAACTACATCAGAAAACTGAGCAGGATTTACAACATATATTAGATAATTTAAATGAATGGTTAAAGCATT
ATCAGCAAGAAGGGGTTGAATTTCCTCAGGTAGAGATTCTTGATACTTGTGATAATTGTCAATTTGCTAGAAACTGTGAA
CGTTTTTCAGAAGTTCAATACCAAGAGAAATCTGTTCAATCTGGAGATATTCAACCTAGTTTTATATTAAATCTAGAGAG
CATTCCAGAAATATCAATTTAG

Upstream 100 bases:

>100_bases
CAGCATATCCCGTGATTCATCTGGTACAACTAACAGGGTAAATATTTGTTGCTTGTTTCAATTCCTATTGCTGATCTTCC
CTATTTTCTATTCCCTAAAA

Downstream 100 bases:

>100_bases
TCTAAAATTATCAAAATAACTAGTTCAAATTAAGGTTACGATTAATATTATTTTGGATTATAAGTCATATTTATCTAATG
CCACGGTTAAAAAGGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTKYRLSQQHLNLLTTCPRKFQYLYLDNLSVPTTLIEQERINWGSQFHLLMQQRELGLPIESLIVENQEMQHCFENFFQA
APEILNFDTQDGLILRQAEYNRSINFNGYILTVIYDLLITNFQQAQIFDWKTYSYPQNKEKIAENWQTRLYLYTLVKTSN
YLPEEVSMNYWFIPPKNKQLPYKWKFSYNQKLHQKTEQDLQHILDNLNEWLKHYQQEGVEFPQVEILDTCDNCQFARNCE
RFSEVQYQEKSVQSGDIQPSFILNLESIPEISI

Sequences:

>Translated_273_residues
MTKYRLSQQHLNLLTTCPRKFQYLYLDNLSVPTTLIEQERINWGSQFHLLMQQRELGLPIESLIVENQEMQHCFENFFQA
APEILNFDTQDGLILRQAEYNRSINFNGYILTVIYDLLITNFQQAQIFDWKTYSYPQNKEKIAENWQTRLYLYTLVKTSN
YLPEEVSMNYWFIPPKNKQLPYKWKFSYNQKLHQKTEQDLQHILDNLNEWLKHYQQEGVEFPQVEILDTCDNCQFARNCE
RFSEVQYQEKSVQSGDIQPSFILNLESIPEISI
>Mature_272_residues
TKYRLSQQHLNLLTTCPRKFQYLYLDNLSVPTTLIEQERINWGSQFHLLMQQRELGLPIESLIVENQEMQHCFENFFQAA
PEILNFDTQDGLILRQAEYNRSINFNGYILTVIYDLLITNFQQAQIFDWKTYSYPQNKEKIAENWQTRLYLYTLVKTSNY
LPEEVSMNYWFIPPKNKQLPYKWKFSYNQKLHQKTEQDLQHILDNLNEWLKHYQQEGVEFPQVEILDTCDNCQFARNCER
FSEVQYQEKSVQSGDIQPSFILNLESIPEISI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32811; Mature: 32679

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYRLSQQHLNLLTTCPRKFQYLYLDNLSVPTTLIEQERINWGSQFHLLMQQRELGLPI
CCCCCCCHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCH
ESLIVENQEMQHCFENFFQAAPEILNFDTQDGLILRQAEYNRSINFNGYILTVIYDLLIT
HHHHHCCHHHHHHHHHHHHHCHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHC
NFQQAQIFDWKTYSYPQNKEKIAENWQTRLYLYTLVKTSNYLPEEVSMNYWFIPPKNKQL
CCCHHEEEECCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCHHCCCCEEEECCCCCCC
PYKWKFSYNQKLHQKTEQDLQHILDNLNEWLKHYQQEGVEFPQVEILDTCDNCQFARNCE
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHH
RFSEVQYQEKSVQSGDIQPSFILNLESIPEISI
HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
TKYRLSQQHLNLLTTCPRKFQYLYLDNLSVPTTLIEQERINWGSQFHLLMQQRELGLPI
CCCCCCHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCH
ESLIVENQEMQHCFENFFQAAPEILNFDTQDGLILRQAEYNRSINFNGYILTVIYDLLIT
HHHHHCCHHHHHHHHHHHHHCHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHC
NFQQAQIFDWKTYSYPQNKEKIAENWQTRLYLYTLVKTSNYLPEEVSMNYWFIPPKNKQL
CCCHHEEEECCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCHHCCCCEEEECCCCCCC
PYKWKFSYNQKLHQKTEQDLQHILDNLNEWLKHYQQEGVEFPQVEILDTCDNCQFARNCE
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHH
RFSEVQYQEKSVQSGDIQPSFILNLESIPEISI
HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA