| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474468
Identifier: 113474468
GI number: 113474468
Start: 990764
End: 992905
Strand: Direct
Name: 113474468
Synonym: Tery_0612
Alternate gene names: NA
Gene position: 990764-992905 (Clockwise)
Preceding gene: 113474466
Following gene: 113474469
Centisome position: 12.78
GC content: 38.98
Gene sequence:
>2142_bases ATGTCATTAGAAAATTCACAAACAAAAAACCTGGAGGCAAGTTCTGATAGCTCCTCTGAAAATGGAGTAAACAGCTATAA TAGTAATTCTCTAGTAGAAACAGAAGCGGTAAATACTACTTCAAAACCTTTAGAGGAAGAACAAAACGATAACTTAGAAG TTGAACCCCAAAAAAATTCCCAAAAATTAATAGAATTTCAAGGAAGAAAAGACAAAAAAAAATATTGGGGATGGCAACTA AAGTGGTGGAGTATTGCAGCTAGCTTTGGAATTACAGCTGGTGTAGCACTTCTGTGGTTACTGGTTATCCCTGCCGAACC AAACTGCGAAAAAATTTCACCATTATCATCAGATGGCAAACGACTTTACTGCGCTAACAAAGCGGCCGAGTCACGAGATC TAGAAGAGTTAGAAAAAGCTTTCAATTTAGTAGAAAGTTGGCCAGAAGAACACCCCCTCTATCAAATGGGTCAACAAATG ACAGGAGAATGGACAAAGTTAATCATCTCCATTGCTTATCAAAAGATTAGAAAAGGGAACTTACAGGGAGCTCTAAATGC AGTAGAGAAAATTCCGGAAGATAGTCCGGCTTACCCTAGGGTAGAAGAAGCAGTAACAGATTGGAAAAAACAATGGATAG AAGGTCAATCTTTCTATGACAAAGCTACAGAAGCTATAAAGGCTATGAATTGGAATAAAGCTTCAGATTATTCCTTGACC ATGTCAAAGCTAGATAATGTTTACTGGCAAACTAATAAGTATAGAGAATTATTAGAGCGCATTGTATTGGAAAAAAAGGC TTGGCAAATCCTTAAAGATGCTCGTTATTTGATATACAGAGAAACAGTAGACGAATATGGAGAAGCGATCGCTTTAGCCA ACAAAATAGACCCTAGTCTTTATATTCGAGCAGAAGCTGAGAAAAATATTCAACAGTGGGTTCGTACCTTAATCGAAATT GCTACTGAATATATAGAAGAAAAAGATATAGAAGGGGCCATTACAGCTATCGAATATATTCCTTCAGGGCATAAACTGAA AAAAGAAGCTAAAGACTTAATATTACTAGGCCATGCTCAAGCAGCAACTTGGAACAAATCTGAGGGAGAGTCTCAAATTG CCAATATGGTAGATCTCATAGAAGGAAAAGCTGTAGCAGCTCAGATTACTTTAGATAGCCCATATTATACACAAGCTCAG ACTCAAGCTAAACAACTCCAACAATATTTAGACAACTTAACTCGTATTCAGCTAGCTAAGGCGATCGCCAGCATTGGTCA ACCACCAGCATTACAATTGGCCATAGACCAAGCTCAAATGGTTGGTCTGAAACAACCAGGACGAATCCAAGCTCAAACCT TAATTGCTAAATGGCGCAAAGATATTCTCAAGATAAAAGACCGACCTTATGTAATTTTAGCTAAACAACTAGCTAAACAA GAGACTATTGATAGTTATACAAAAGCTATTAAACAAGCTAGTTATGTTGCCTTGGATCGTCCACTGAGAATAGAGGCTCA AACTCTAATAGCTGAGTGGAATAAACGAGTACAAATTATAGAAGATTCACCATTATTAGCAGAAGCTAGAGCTTTAGCAA AAGAAGGAAACCTAGGTCAAGCTATTGATGTTGCATATCAGATAGAACAGGGTCGTGCTCTATATAGGGAAGCTCAGGAT GAAATTTATAAATGGACAACAGAGCTACAAATTGCCCAAGATCAACCAATTCTTGATCAAGCTTATAGCTTGGCCAAGCA AGGTAGTCTGACTGCTGCCATTAACACAGCTTATAAAATTGGCTATGGACGTACTTTGTATTATGAAGCTCAAGATGCTA TATCTCGTTGGGAGTCTGAACTAGATGCGATACGGGAATCACAAAGAGCTGAGCAAGCTCGCAGAGAGCAACAATACCAA CTAAGGCAGGAGCAACAATATTATTCCCCTGCTCCAAGTACCCAATATTATTCACCAGCTCCACAGAGGTCTTATTCCCC TGCCTCTAGTCCTCAATATTATTCTCCTGCCCCGAGTCCCCAATATTATTCCCCTGCTCCACAGAGGTCTTATTATTCTA CCCCAGACCCATCTCCAGCTCCAGCCTCCAATAGGTCAGATGCCTATCTACTTCAAGAATAA
Upstream 100 bases:
>100_bases TTAAAAATACTCTGGGTGATGGAAAAGGCTAAAAAATTTATTTCAGCAAATTATCCTCACCTGCTTAAAAATTATTACCA TTTGCAGAATAAATTTCCTT
Downstream 100 bases:
>100_bases TTAACTATTAAGATTGAAGATTTAATCAAGATATTAAAGAAACTTTCAGTTTAATTTTTACTGGTTATTATAATCTTAAA TATCTCAAGCAAAAACAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 713; Mature: 712
Protein sequence:
>713_residues MSLENSQTKNLEASSDSSSENGVNSYNSNSLVETEAVNTTSKPLEEEQNDNLEVEPQKNSQKLIEFQGRKDKKKYWGWQL KWWSIAASFGITAGVALLWLLVIPAEPNCEKISPLSSDGKRLYCANKAAESRDLEELEKAFNLVESWPEEHPLYQMGQQM TGEWTKLIISIAYQKIRKGNLQGALNAVEKIPEDSPAYPRVEEAVTDWKKQWIEGQSFYDKATEAIKAMNWNKASDYSLT MSKLDNVYWQTNKYRELLERIVLEKKAWQILKDARYLIYRETVDEYGEAIALANKIDPSLYIRAEAEKNIQQWVRTLIEI ATEYIEEKDIEGAITAIEYIPSGHKLKKEAKDLILLGHAQAATWNKSEGESQIANMVDLIEGKAVAAQITLDSPYYTQAQ TQAKQLQQYLDNLTRIQLAKAIASIGQPPALQLAIDQAQMVGLKQPGRIQAQTLIAKWRKDILKIKDRPYVILAKQLAKQ ETIDSYTKAIKQASYVALDRPLRIEAQTLIAEWNKRVQIIEDSPLLAEARALAKEGNLGQAIDVAYQIEQGRALYREAQD EIYKWTTELQIAQDQPILDQAYSLAKQGSLTAAINTAYKIGYGRTLYYEAQDAISRWESELDAIRESQRAEQARREQQYQ LRQEQQYYSPAPSTQYYSPAPQRSYSPASSPQYYSPAPSPQYYSPAPQRSYYSTPDPSPAPASNRSDAYLLQE
Sequences:
>Translated_713_residues MSLENSQTKNLEASSDSSSENGVNSYNSNSLVETEAVNTTSKPLEEEQNDNLEVEPQKNSQKLIEFQGRKDKKKYWGWQL KWWSIAASFGITAGVALLWLLVIPAEPNCEKISPLSSDGKRLYCANKAAESRDLEELEKAFNLVESWPEEHPLYQMGQQM TGEWTKLIISIAYQKIRKGNLQGALNAVEKIPEDSPAYPRVEEAVTDWKKQWIEGQSFYDKATEAIKAMNWNKASDYSLT MSKLDNVYWQTNKYRELLERIVLEKKAWQILKDARYLIYRETVDEYGEAIALANKIDPSLYIRAEAEKNIQQWVRTLIEI ATEYIEEKDIEGAITAIEYIPSGHKLKKEAKDLILLGHAQAATWNKSEGESQIANMVDLIEGKAVAAQITLDSPYYTQAQ TQAKQLQQYLDNLTRIQLAKAIASIGQPPALQLAIDQAQMVGLKQPGRIQAQTLIAKWRKDILKIKDRPYVILAKQLAKQ ETIDSYTKAIKQASYVALDRPLRIEAQTLIAEWNKRVQIIEDSPLLAEARALAKEGNLGQAIDVAYQIEQGRALYREAQD EIYKWTTELQIAQDQPILDQAYSLAKQGSLTAAINTAYKIGYGRTLYYEAQDAISRWESELDAIRESQRAEQARREQQYQ LRQEQQYYSPAPSTQYYSPAPQRSYSPASSPQYYSPAPSPQYYSPAPQRSYYSTPDPSPAPASNRSDAYLLQE >Mature_712_residues SLENSQTKNLEASSDSSSENGVNSYNSNSLVETEAVNTTSKPLEEEQNDNLEVEPQKNSQKLIEFQGRKDKKKYWGWQLK WWSIAASFGITAGVALLWLLVIPAEPNCEKISPLSSDGKRLYCANKAAESRDLEELEKAFNLVESWPEEHPLYQMGQQMT GEWTKLIISIAYQKIRKGNLQGALNAVEKIPEDSPAYPRVEEAVTDWKKQWIEGQSFYDKATEAIKAMNWNKASDYSLTM SKLDNVYWQTNKYRELLERIVLEKKAWQILKDARYLIYRETVDEYGEAIALANKIDPSLYIRAEAEKNIQQWVRTLIEIA TEYIEEKDIEGAITAIEYIPSGHKLKKEAKDLILLGHAQAATWNKSEGESQIANMVDLIEGKAVAAQITLDSPYYTQAQT QAKQLQQYLDNLTRIQLAKAIASIGQPPALQLAIDQAQMVGLKQPGRIQAQTLIAKWRKDILKIKDRPYVILAKQLAKQE TIDSYTKAIKQASYVALDRPLRIEAQTLIAEWNKRVQIIEDSPLLAEARALAKEGNLGQAIDVAYQIEQGRALYREAQDE IYKWTTELQIAQDQPILDQAYSLAKQGSLTAAINTAYKIGYGRTLYYEAQDAISRWESELDAIRESQRAEQARREQQYQL RQEQQYYSPAPSTQYYSPAPQRSYSPASSPQYYSPAPSPQYYSPAPQRSYYSTPDPSPAPASNRSDAYLLQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81085; Mature: 80954
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLENSQTKNLEASSDSSSENGVNSYNSNSLVETEAVNTTSKPLEEEQNDNLEVEPQKNS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCEEECCCCCC QKLIEFQGRKDKKKYWGWQLKWWSIAASFGITAGVALLWLLVIPAEPNCEKISPLSSDGK HHHHHHCCCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RLYCANKAAESRDLEELEKAFNLVESWPEEHPLYQMGQQMTGEWTKLIISIAYQKIRKGN EEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LQGALNAVEKIPEDSPAYPRVEEAVTDWKKQWIEGQSFYDKATEAIKAMNWNKASDYSLT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEE MSKLDNVYWQTNKYRELLERIVLEKKAWQILKDARYLIYRETVDEYGEAIALANKIDPSL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE YIRAEAEKNIQQWVRTLIEIATEYIEEKDIEGAITAIEYIPSGHKLKKEAKDLILLGHAQ EEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCEEEEECCC AATWNKSEGESQIANMVDLIEGKAVAAQITLDSPYYTQAQTQAKQLQQYLDNLTRIQLAK CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH AIASIGQPPALQLAIDQAQMVGLKQPGRIQAQTLIAKWRKDILKIKDRPYVILAKQLAKQ HHHHCCCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH ETIDSYTKAIKQASYVALDRPLRIEAQTLIAEWNKRVQIIEDSPLLAEARALAKEGNLGQ HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCC AIDVAYQIEQGRALYREAQDEIYKWTTELQIAQDQPILDQAYSLAKQGSLTAAINTAYKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCEEEHHHHEEE GYGRTLYYEAQDAISRWESELDAIRESQRAEQARREQQYQLRQEQQYYSPAPSTQYYSPA CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PQRSYSPASSPQYYSPAPSPQYYSPAPQRSYYSTPDPSPAPASNRSDAYLLQE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure SLENSQTKNLEASSDSSSENGVNSYNSNSLVETEAVNTTSKPLEEEQNDNLEVEPQKNS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCEEECCCCCC QKLIEFQGRKDKKKYWGWQLKWWSIAASFGITAGVALLWLLVIPAEPNCEKISPLSSDGK HHHHHHCCCCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RLYCANKAAESRDLEELEKAFNLVESWPEEHPLYQMGQQMTGEWTKLIISIAYQKIRKGN EEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LQGALNAVEKIPEDSPAYPRVEEAVTDWKKQWIEGQSFYDKATEAIKAMNWNKASDYSLT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEE MSKLDNVYWQTNKYRELLERIVLEKKAWQILKDARYLIYRETVDEYGEAIALANKIDPSL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE YIRAEAEKNIQQWVRTLIEIATEYIEEKDIEGAITAIEYIPSGHKLKKEAKDLILLGHAQ EEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCEEEEECCC AATWNKSEGESQIANMVDLIEGKAVAAQITLDSPYYTQAQTQAKQLQQYLDNLTRIQLAK CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH AIASIGQPPALQLAIDQAQMVGLKQPGRIQAQTLIAKWRKDILKIKDRPYVILAKQLAKQ HHHHCCCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH ETIDSYTKAIKQASYVALDRPLRIEAQTLIAEWNKRVQIIEDSPLLAEARALAKEGNLGQ HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCC AIDVAYQIEQGRALYREAQDEIYKWTTELQIAQDQPILDQAYSLAKQGSLTAAINTAYKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCEEEHHHHEEE GYGRTLYYEAQDAISRWESELDAIRESQRAEQARREQQYQLRQEQQYYSPAPSTQYYSPA CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PQRSYSPASSPQYYSPAPSPQYYSPAPQRSYYSTPDPSPAPASNRSDAYLLQE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA