| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474318
Identifier: 113474318
GI number: 113474318
Start: 705273
End: 706340
Strand: Reverse
Name: 113474318
Synonym: Tery_0447
Alternate gene names: NA
Gene position: 706340-705273 (Counterclockwise)
Preceding gene: 113474319
Following gene: 113474315
Centisome position: 9.11
GC content: 33.99
Gene sequence:
>1068_bases ATGGCCTCAAATCTTGACAAATCTACAATTGAGTTCATTGAGCAAGAAGTAAGCAAATTACTCAAAAATTTGCCCAACTT GAAACAGCAAAAATGGATAAGGCGATCGCTTTCCACTATAGTTAATATCGCAGGAGAAGAACTTGAGTACCTGGACTGGA AGATATTAGCGGCCTCCTTACAAGACATGGAAAATGGATTTAAAACATTTTATCCCTATCGCCATATACCTAAAATTACT ATATTTGGTTCTGCACGAGTATCCTCAGATACCCCAGAGTATAAAATGGCAGTAGAATTTGCTCATCATATGACTAAACA AGGTTTTATGGTAATGACCGGTGCAGGTCCTGGGATAATGCAAGCTGGTAATGAGGGAGCAGGAAGCAACAAATCTTTCG GTCTCAATATTCAGTTACCTTTTGAGCAAGAGTCTAATCCATTTATAAGAGGTAACAATAAATTAATTAACTTTAAATAC TTTTTTACTCGTAAATTATTTTTCCTGAAAGAAACTGATGCTATAGCTTTATTTCCAGGTGGTTTTGGTACCCTAGATGA GGCATTTGAAACTTTAACACTAGTACAAACAGGTAAATTTGGCCCCGCTCCTGTAATATTAATAGATTATCCTGGTGGAA ACTATTGGTATGACTGGAATGATTTTATAAATAAACAATTACTCCTACGAGGTTTGATAAGTCCAAATGATTATAATTTT TACACTATTACAGATAACTTAGAATCAGCTTATGAAGCGATCGCCAATTTTTATAGAGTTTATCATTCTAGTCGTTATGT AGGAGAAAAGTTTGTAATTCGTCTTAAATCAGAAATTTCAGACAAAGATGTAGACTTTTTGAATCAAGAATTTAGGGATA TTTTAACTGTAGGAAATATAGAGAAAAGTCAAGTATTACCAGAAGAGTCCGCAGATAAAACCTTTCACTTACCACGTTTA GTTATGCATTTTAACCACAAGGACATAGGCAGACTATATCAAATGATTGATCAGATAAATAAAGTGGGAGGCAATATACA AAAATTCAGTCATTTAGGAAGTAAGTAA
Upstream 100 bases:
>100_bases TACAAGAGTTGCAACAGGATATTAATAATTAATTTTCTTTTTTGTGCTCTCTTTGTTCTGGTATAAATAAATAAAGTTGT CTAGGATATAGAAACAATCT
Downstream 100 bases:
>100_bases TAGAGCTAATTACAGAAGTAAAATAAGAAGTCAAATAATTAGACAAAATTAGATCTATCTCAACAAATATTGAAAATTTA CTGATTATCAGTTATAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MASNLDKSTIEFIEQEVSKLLKNLPNLKQQKWIRRSLSTIVNIAGEELEYLDWKILAASLQDMENGFKTFYPYRHIPKIT IFGSARVSSDTPEYKMAVEFAHHMTKQGFMVMTGAGPGIMQAGNEGAGSNKSFGLNIQLPFEQESNPFIRGNNKLINFKY FFTRKLFFLKETDAIALFPGGFGTLDEAFETLTLVQTGKFGPAPVILIDYPGGNYWYDWNDFINKQLLLRGLISPNDYNF YTITDNLESAYEAIANFYRVYHSSRYVGEKFVIRLKSEISDKDVDFLNQEFRDILTVGNIEKSQVLPEESADKTFHLPRL VMHFNHKDIGRLYQMIDQINKVGGNIQKFSHLGSK
Sequences:
>Translated_355_residues MASNLDKSTIEFIEQEVSKLLKNLPNLKQQKWIRRSLSTIVNIAGEELEYLDWKILAASLQDMENGFKTFYPYRHIPKIT IFGSARVSSDTPEYKMAVEFAHHMTKQGFMVMTGAGPGIMQAGNEGAGSNKSFGLNIQLPFEQESNPFIRGNNKLINFKY FFTRKLFFLKETDAIALFPGGFGTLDEAFETLTLVQTGKFGPAPVILIDYPGGNYWYDWNDFINKQLLLRGLISPNDYNF YTITDNLESAYEAIANFYRVYHSSRYVGEKFVIRLKSEISDKDVDFLNQEFRDILTVGNIEKSQVLPEESADKTFHLPRL VMHFNHKDIGRLYQMIDQINKVGGNIQKFSHLGSK >Mature_354_residues ASNLDKSTIEFIEQEVSKLLKNLPNLKQQKWIRRSLSTIVNIAGEELEYLDWKILAASLQDMENGFKTFYPYRHIPKITI FGSARVSSDTPEYKMAVEFAHHMTKQGFMVMTGAGPGIMQAGNEGAGSNKSFGLNIQLPFEQESNPFIRGNNKLINFKYF FTRKLFFLKETDAIALFPGGFGTLDEAFETLTLVQTGKFGPAPVILIDYPGGNYWYDWNDFINKQLLLRGLISPNDYNFY TITDNLESAYEAIANFYRVYHSSRYVGEKFVIRLKSEISDKDVDFLNQEFRDILTVGNIEKSQVLPEESADKTFHLPRLV MHFNHKDIGRLYQMIDQINKVGGNIQKFSHLGSK
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40674; Mature: 40543
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNLDKSTIEFIEQEVSKLLKNLPNLKQQKWIRRSLSTIVNIAGEELEYLDWKILAASL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QDMENGFKTFYPYRHIPKITIFGSARVSSDTPEYKMAVEFAHHMTKQGFMVMTGAGPGIM HHHHCCHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH QAGNEGAGSNKSFGLNIQLPFEQESNPFIRGNNKLINFKYFFTRKLFFLKETDAIALFPG CCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCEEEEEEEEEEEEEEEEEECCEEEEECC GFGTLDEAFETLTLVQTGKFGPAPVILIDYPGGNYWYDWNDFINKQLLLRGLISPNDYNF CCCCHHHHHHHHHHEECCCCCCCCEEEEECCCCCEEECHHHHHHHHHHHHHCCCCCCCEE YTITDNLESAYEAIANFYRVYHSSRYVGEKFVIRLKSEISDKDVDFLNQEFRDILTVGNI EEEECCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEHHHCCCCHHHHHHHHHHHHHHHCCC EKSQVLPEESADKTFHLPRLVMHFNHKDIGRLYQMIDQINKVGGNIQKFSHLGSK HHHHCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCC >Mature Secondary Structure ASNLDKSTIEFIEQEVSKLLKNLPNLKQQKWIRRSLSTIVNIAGEELEYLDWKILAASL CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QDMENGFKTFYPYRHIPKITIFGSARVSSDTPEYKMAVEFAHHMTKQGFMVMTGAGPGIM HHHHCCHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH QAGNEGAGSNKSFGLNIQLPFEQESNPFIRGNNKLINFKYFFTRKLFFLKETDAIALFPG CCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCEEEEEEEEEEEEEEEEEECCEEEEECC GFGTLDEAFETLTLVQTGKFGPAPVILIDYPGGNYWYDWNDFINKQLLLRGLISPNDYNF CCCCHHHHHHHHHHEECCCCCCCCEEEEECCCCCEEECHHHHHHHHHHHHHCCCCCCCEE YTITDNLESAYEAIANFYRVYHSSRYVGEKFVIRLKSEISDKDVDFLNQEFRDILTVGNI EEEECCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEHHHCCCCHHHHHHHHHHHHHHHCCC EKSQVLPEESADKTFHLPRLVMHFNHKDIGRLYQMIDQINKVGGNIQKFSHLGSK HHHHCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA