Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474319

Identifier: 113474319

GI number: 113474319

Start: 707465

End: 709603

Strand: Reverse

Name: 113474319

Synonym: Tery_0448

Alternate gene names: NA

Gene position: 709603-707465 (Counterclockwise)

Preceding gene: 113474320

Following gene: 113474318

Centisome position: 9.16

GC content: 37.21

Gene sequence:

>2139_bases
TTGATTCTTTCTCCTGAACTTTGTTCTCACTGGGATAGAGTAAAGGGCGACCAAATTTATACAGTTGATGTAGGAATTGC
TTGTCTGGGAACGAAATCAATGTTGCCCAAGCATCCGAATCGAAAATATGATGAAAGTAAAGATAAATATAAAAAAAGAG
TCAAGACTTGGATGGACAAGCGTGATATGACTTATGAATCTTGGGATGAACTACAACTAAAACGTCAAGATGAACTGGAA
AAGTTTGTGAGTTTTTACAACGCAGACATTCAAAGTTTCATAGACGGGAAAATTGTAGCAGGAGCATCGTTACCAGATAG
CTTTTCATGTCGAATGAAGATTTCAGGTAAAGGTTTAAAGGATCTAGTTTTGAACTTTCCTTATATATTTGATGTTAGTG
AACCTGATGAATTTAGTGAATTAATTCAAAACTCAGGCTCATCTGAAACGGATAAGCCTTCTTTTGTTTTAGAAGCACCT
GAATTAAATGCGCCAAAAGTCTGCGTAATAGACAGTGGTATTGAAGAAAGACATCCTTTGTTAAAATCAGCTATTGATCA
ACAAAACTCCTCTGGCTGGGTTCCTGGGGAAACTGATCAAACTTCTGACTACGTTAAAAATGGCGGACATGGAACAAGAG
TAGCGGGTGCTATTCTCTATCCCAGAAATATACCTCGGAATGGTACTCAAAAAGCTATTTGCTGGATTCAAAATGCTAGA
GTTTTAAATCAATATTGTAAGCTTCCAGAAAAGTTATTTCCACCTAGTTTACTGAGTGAAATAGTTGAGTTATACAAGAA
AACAGAAACACGAATATTTAATCATTCAATTACTGGAGCAGTTCCTAGTCGCCAAGTCTACATGAGTGCTTGGGCAGCTG
CTATCGACCAACTTACTTGGCTTAATGATATTCTATTTATTGTTTCTGCTGGTAATTTACCTTTAGATAAACCTTCAGAT
AGCAAGATAGGTATTACAAGATTGTCAGTTACAGATCACTTCAAAGCAAACCGCCCCTATCCTGATTATCTTTTAGAAGA
CTCTTGCAGAATTGCTAACCCTGCTCAAAGCTTCCAAGCGCTAACTGTTGGTTCAGTTGCTTCCATTTACTACAACTCTC
CACCTTATAGTTCAATATCAAAAACAGATATGCCCTCAGCTTTTTCCTGTTCAGGATGGGGAATTTGGCAGACAATTAAA
CCAGAAGTAGTTGAGTATGGTGGCGATCTAGTCAAGGATGAAAGTACACCCCCAAAGATTACTTATTTTGAATCTGTAAT
TTGTCCTGAGTTGGTACGTTCAACCCCGAGCGGTGGCCCTGCTATATCTTCTAACCAAGTAGGAACCTCTTTTGCGGCAC
CAAAAGTTAGCCATATTGCAGCTTGTCTAGCTGCTGAATTACCCAATGAGAATTGTCTTTTATATCGTGCTTTAATTGTG
CAGTCAGCTAGATGGCCTGAATGGACAAGAGATGAAAATATCGACAAGTTAAATATTATACGTCAAATTGGTTATGGAAT
TCCTAATATTGACCGTGCTTTAGGAAATTCTGCCAACCGTATCACTTTAATTACAAGAGGAGAACAAAGAATTAAAGCTA
AACAAGCTCATGTTTATCAAGTGAAATTACCAGAAAAATTACTTTCTCAGGGGGAAGAGTTAGAAATTCTAGTAGAAATT
ACACTTTCCTACAAAGCTCAACCCCGTCGCACTAGACGAAATAGAAGAAGATATCTTTCAACATGGCTTGATTGGGAGTG
TAGCAAAAAAGGAGAAGATCCTGATAGATTTTTAGCAAGAATTTTAAAGGATGATAATGCTCCAGAAGATTCAGACAAGG
GAGAAGATCCATTTAAATGGACTCTCGGTAAACAGGGAAATTATGGTCAAGTTAAGGGTGTTTCTAGAACTGCAGGAACT
CTTCAAAAAGATTGGGCAACTGTTAATTCATATAACCTTAGAGAAGCTTTTTGTATTGCAGTAGTCGGACATGAAGGATG
GAATAACGATCCACATGCTGATGTTCCATATTCTCTTGTTGTGAGTTTTGAAGCTCTAGAAACTAATATCTCAATTTATA
ATCCTGTTAAGAATGAAGTTGAAATAGAAATTCCCGACAAAATTCCCGATAAAATTTAG

Upstream 100 bases:

>100_bases
TGAATTACAGACAAAAATAGAGAAATTTATTGCAGAAGAAAATAAAAGTGGTGCAGTTGCTGGAATATGGGAAATAATTG
ATGGTACTAAGAAACCAGAG

Downstream 100 bases:

>100_bases
GGATGAGGGAGTAGTATTTCGGAGCTTCATCAAAATAACTATCTAATTTAAACATTTCTAAAATTTCCTCTAATTAAAGA
GGTTCTCTAGCAATAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 712; Mature: 712

Protein sequence:

>712_residues
MILSPELCSHWDRVKGDQIYTVDVGIACLGTKSMLPKHPNRKYDESKDKYKKRVKTWMDKRDMTYESWDELQLKRQDELE
KFVSFYNADIQSFIDGKIVAGASLPDSFSCRMKISGKGLKDLVLNFPYIFDVSEPDEFSELIQNSGSSETDKPSFVLEAP
ELNAPKVCVIDSGIEERHPLLKSAIDQQNSSGWVPGETDQTSDYVKNGGHGTRVAGAILYPRNIPRNGTQKAICWIQNAR
VLNQYCKLPEKLFPPSLLSEIVELYKKTETRIFNHSITGAVPSRQVYMSAWAAAIDQLTWLNDILFIVSAGNLPLDKPSD
SKIGITRLSVTDHFKANRPYPDYLLEDSCRIANPAQSFQALTVGSVASIYYNSPPYSSISKTDMPSAFSCSGWGIWQTIK
PEVVEYGGDLVKDESTPPKITYFESVICPELVRSTPSGGPAISSNQVGTSFAAPKVSHIAACLAAELPNENCLLYRALIV
QSARWPEWTRDENIDKLNIIRQIGYGIPNIDRALGNSANRITLITRGEQRIKAKQAHVYQVKLPEKLLSQGEELEILVEI
TLSYKAQPRRTRRNRRRYLSTWLDWECSKKGEDPDRFLARILKDDNAPEDSDKGEDPFKWTLGKQGNYGQVKGVSRTAGT
LQKDWATVNSYNLREAFCIAVVGHEGWNNDPHADVPYSLVVSFEALETNISIYNPVKNEVEIEIPDKIPDKI

Sequences:

>Translated_712_residues
MILSPELCSHWDRVKGDQIYTVDVGIACLGTKSMLPKHPNRKYDESKDKYKKRVKTWMDKRDMTYESWDELQLKRQDELE
KFVSFYNADIQSFIDGKIVAGASLPDSFSCRMKISGKGLKDLVLNFPYIFDVSEPDEFSELIQNSGSSETDKPSFVLEAP
ELNAPKVCVIDSGIEERHPLLKSAIDQQNSSGWVPGETDQTSDYVKNGGHGTRVAGAILYPRNIPRNGTQKAICWIQNAR
VLNQYCKLPEKLFPPSLLSEIVELYKKTETRIFNHSITGAVPSRQVYMSAWAAAIDQLTWLNDILFIVSAGNLPLDKPSD
SKIGITRLSVTDHFKANRPYPDYLLEDSCRIANPAQSFQALTVGSVASIYYNSPPYSSISKTDMPSAFSCSGWGIWQTIK
PEVVEYGGDLVKDESTPPKITYFESVICPELVRSTPSGGPAISSNQVGTSFAAPKVSHIAACLAAELPNENCLLYRALIV
QSARWPEWTRDENIDKLNIIRQIGYGIPNIDRALGNSANRITLITRGEQRIKAKQAHVYQVKLPEKLLSQGEELEILVEI
TLSYKAQPRRTRRNRRRYLSTWLDWECSKKGEDPDRFLARILKDDNAPEDSDKGEDPFKWTLGKQGNYGQVKGVSRTAGT
LQKDWATVNSYNLREAFCIAVVGHEGWNNDPHADVPYSLVVSFEALETNISIYNPVKNEVEIEIPDKIPDKI
>Mature_712_residues
MILSPELCSHWDRVKGDQIYTVDVGIACLGTKSMLPKHPNRKYDESKDKYKKRVKTWMDKRDMTYESWDELQLKRQDELE
KFVSFYNADIQSFIDGKIVAGASLPDSFSCRMKISGKGLKDLVLNFPYIFDVSEPDEFSELIQNSGSSETDKPSFVLEAP
ELNAPKVCVIDSGIEERHPLLKSAIDQQNSSGWVPGETDQTSDYVKNGGHGTRVAGAILYPRNIPRNGTQKAICWIQNAR
VLNQYCKLPEKLFPPSLLSEIVELYKKTETRIFNHSITGAVPSRQVYMSAWAAAIDQLTWLNDILFIVSAGNLPLDKPSD
SKIGITRLSVTDHFKANRPYPDYLLEDSCRIANPAQSFQALTVGSVASIYYNSPPYSSISKTDMPSAFSCSGWGIWQTIK
PEVVEYGGDLVKDESTPPKITYFESVICPELVRSTPSGGPAISSNQVGTSFAAPKVSHIAACLAAELPNENCLLYRALIV
QSARWPEWTRDENIDKLNIIRQIGYGIPNIDRALGNSANRITLITRGEQRIKAKQAHVYQVKLPEKLLSQGEELEILVEI
TLSYKAQPRRTRRNRRRYLSTWLDWECSKKGEDPDRFLARILKDDNAPEDSDKGEDPFKWTLGKQGNYGQVKGVSRTAGT
LQKDWATVNSYNLREAFCIAVVGHEGWNNDPHADVPYSLVVSFEALETNISIYNPVKNEVEIEIPDKIPDKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000209
- InterPro:   IPR015500 [H]

Pfam domain/function: PF00082 Peptidase_S8 [H]

EC number: NA

Molecular weight: Translated: 80049; Mature: 80049

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSPELCSHWDRVKGDQIYTVDVGIACLGTKSMLPKHPNRKYDESKDKYKKRVKTWMDK
CCCCCHHHHHHHHCCCCEEEEEEECEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
RDMTYESWDELQLKRQDELEKFVSFYNADIQSFIDGKIVAGASLPDSFSCRMKISGKGLK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCHH
DLVLNFPYIFDVSEPDEFSELIQNSGSSETDKPSFVLEAPELNAPKVCVIDSGIEERHPL
HHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHHH
LKSAIDQQNSSGWVPGETDQTSDYVKNGGHGTRVAGAILYPRNIPRNGTQKAICWIQNAR
HHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHH
VLNQYCKLPEKLFPPSLLSEIVELYKKTETRIFNHSITGAVPSRQVYMSAWAAAIDQLTW
HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LNDILFIVSAGNLPLDKPSDSKIGITRLSVTDHFKANRPYPDYLLEDSCRIANPAQSFQA
HHHEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHH
LTVGSVASIYYNSPPYSSISKTDMPSAFSCSGWGIWQTIKPEVVEYGGDLVKDESTPPKI
HHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCCCE
TYFESVICPELVRSTPSGGPAISSNQVGTSFAAPKVSHIAACLAAELPNENCLLYRALIV
EHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
QSARWPEWTRDENIDKLNIIRQIGYGIPNIDRALGNSANRITLITRGEQRIKAKQAHVYQ
HCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEECCHHHHHHHHCEEEE
VKLPEKLLSQGEELEILVEITLSYKAQPRRTRRNRRRYLSTWLDWECSKKGEDPDRFLAR
EECCHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ILKDDNAPEDSDKGEDPFKWTLGKQGNYGQVKGVSRTAGTLQKDWATVNSYNLREAFCIA
HHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEE
VVGHEGWNNDPHADVPYSLVVSFEALETNISIYNPVKNEVEIEIPDKIPDKI
EEECCCCCCCCCCCCCCEEEEEEEHHHCCCEEECCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MILSPELCSHWDRVKGDQIYTVDVGIACLGTKSMLPKHPNRKYDESKDKYKKRVKTWMDK
CCCCCHHHHHHHHCCCCEEEEEEECEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
RDMTYESWDELQLKRQDELEKFVSFYNADIQSFIDGKIVAGASLPDSFSCRMKISGKGLK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCHH
DLVLNFPYIFDVSEPDEFSELIQNSGSSETDKPSFVLEAPELNAPKVCVIDSGIEERHPL
HHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHHH
LKSAIDQQNSSGWVPGETDQTSDYVKNGGHGTRVAGAILYPRNIPRNGTQKAICWIQNAR
HHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHH
VLNQYCKLPEKLFPPSLLSEIVELYKKTETRIFNHSITGAVPSRQVYMSAWAAAIDQLTW
HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LNDILFIVSAGNLPLDKPSDSKIGITRLSVTDHFKANRPYPDYLLEDSCRIANPAQSFQA
HHHEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHH
LTVGSVASIYYNSPPYSSISKTDMPSAFSCSGWGIWQTIKPEVVEYGGDLVKDESTPPKI
HHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCCCE
TYFESVICPELVRSTPSGGPAISSNQVGTSFAAPKVSHIAACLAAELPNENCLLYRALIV
EHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
QSARWPEWTRDENIDKLNIIRQIGYGIPNIDRALGNSANRITLITRGEQRIKAKQAHVYQ
HCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEECCHHHHHHHHCEEEE
VKLPEKLLSQGEELEILVEITLSYKAQPRRTRRNRRRYLSTWLDWECSKKGEDPDRFLAR
EECCHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ILKDDNAPEDSDKGEDPFKWTLGKQGNYGQVKGVSRTAGTLQKDWATVNSYNLREAFCIA
HHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEE
VVGHEGWNNDPHADVPYSLVVSFEALETNISIYNPVKNEVEIEIPDKIPDKI
EEECCCCCCCCCCCCCCEEEEEEEHHHCCCEEECCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]