Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474311

Identifier: 113474311

GI number: 113474311

Start: 692630

End: 693079

Strand: Reverse

Name: 113474311

Synonym: Tery_0440

Alternate gene names: NA

Gene position: 693079-692630 (Counterclockwise)

Preceding gene: 113474315

Following gene: 113474308

Centisome position: 8.94

GC content: 34.44

Gene sequence:

>450_bases
ATGATTACTCGTTGCATGATTCCAGTTGTTAAGTCTCCCCAAGACTATCAAGCATATCGCATTAGTCCTAATGATAATAA
TAGACTAGCAATTATTTTCAGCCCAGCCAATGCCAATGCTTCTTTAACTGTATGTTTAGAAGTTTTTGATGTAGGAGGAA
AAACACCTTTACATCAACATCATTTCGCTGTAGAAATGTTTTTTATTCTCAAAGGAGAAGGAAAAGCAAGCTGTGATGGA
AAATCTATTAATATTTGTGCTGGTGATAGTATTCTTATGCCACCAACGGGTAATCATATTATAGAAAATACTGGTTCCAC
TCGTCTTTATGCCTTGTGTATTATGGTGCCAAATGAAGACTTTGCAGAACTAATTCGCAGTGGAAAACCAGTAGATTTAG
ATGAAGAAGATATCCAAGTTTTGACTAGCTCAAATTTTTATAAATTTTGA

Upstream 100 bases:

>100_bases
AGTTTACTGTGCTACCTAAAGCTAAAAGTCAAAACCTTTAAAATGTAGCTATAATAATCAATAATTATCTAAATAAATTA
ACACTATTACTTATAAGAAA

Downstream 100 bases:

>100_bases
TTAAAAAGAAAAGGAAGATAAAAGTTTACTTCACATTATTTGAGAAGTACTATTTGAAAATAAAATTTTTCTAGTATATT
TACTCAATTAGTTATTAAAA

Product: cupin 2 barrel domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin RmlC-Type Superfamily Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MITRCMIPVVKSPQDYQAYRISPNDNNRLAIIFSPANANASLTVCLEVFDVGGKTPLHQHHFAVEMFFILKGEGKASCDG
KSINICAGDSILMPPTGNHIIENTGSTRLYALCIMVPNEDFAELIRSGKPVDLDEEDIQVLTSSNFYKF

Sequences:

>Translated_149_residues
MITRCMIPVVKSPQDYQAYRISPNDNNRLAIIFSPANANASLTVCLEVFDVGGKTPLHQHHFAVEMFFILKGEGKASCDG
KSINICAGDSILMPPTGNHIIENTGSTRLYALCIMVPNEDFAELIRSGKPVDLDEEDIQVLTSSNFYKF
>Mature_149_residues
MITRCMIPVVKSPQDYQAYRISPNDNNRLAIIFSPANANASLTVCLEVFDVGGKTPLHQHHFAVEMFFILKGEGKASCDG
KSINICAGDSILMPPTGNHIIENTGSTRLYALCIMVPNEDFAELIRSGKPVDLDEEDIQVLTSSNFYKF

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16454; Mature: 16454

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRCMIPVVKSPQDYQAYRISPNDNNRLAIIFSPANANASLTVCLEVFDVGGKTPLHQH
CCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCC
HFAVEMFFILKGEGKASCDGKSINICAGDSILMPPTGNHIIENTGSTRLYALCIMVPNED
EEEEEEEEEEECCCCCCCCCCEEEEEECCCEEECCCCCEEEECCCCCEEEEEEEEECCHH
FAELIRSGKPVDLDEEDIQVLTSSNFYKF
HHHHHHCCCCCCCCCCCEEEEECCCEECC
>Mature Secondary Structure
MITRCMIPVVKSPQDYQAYRISPNDNNRLAIIFSPANANASLTVCLEVFDVGGKTPLHQH
CCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCC
HFAVEMFFILKGEGKASCDGKSINICAGDSILMPPTGNHIIENTGSTRLYALCIMVPNED
EEEEEEEEEEECCCCCCCCCCEEEEEECCCEEECCCCCEEEECCCCCEEEEEEEEECCHH
FAELIRSGKPVDLDEEDIQVLTSSNFYKF
HHHHHHCCCCCCCCCCCEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA