| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is coaE [H]
Identifier: 113474243
GI number: 113474243
Start: 555242
End: 555889
Strand: Reverse
Name: coaE [H]
Synonym: Tery_0362
Alternate gene names: 113474243
Gene position: 555889-555242 (Counterclockwise)
Preceding gene: 113474245
Following gene: 113474242
Centisome position: 7.17
GC content: 34.1
Gene sequence:
>648_bases ATGCGCTTAATTGGTTTAACTGGTGGTATTAGCACAGGAAAAACTACTGTCTCTAATTATTTGAGTAAAAACTATCAGTT TCCAATTTGGGATGCGGATGTTTATGGGCGAGAAGCTGTAAAACCTGGTTCATCAATTTTAAAGAGCATAGTAGAACACT ACGGTCAAAATATTGTCTTACCTAATGGTAATTTAGATAGACGACAATTAGGAGAGATTGTTTTTAATGATCAAAAAGAG TTACTCTGGTTACAAAAACAAATTCATCCTTATGTCCGCGATCGCTTTGAGCAGAATATTAAGTATTTTATTGCCAAAAA TAGTGAATTTGAGCAGACAAATTATATACAGGTAACATCCCATAAAATTACTTCTCAAGATGTTACAGCGGTATTAGTAA TACCATTGTTATTTGAAGCTAAGATGACTGACTTAGTAACAGAAATTTGGGTTATATATGCTCCATTCCAACAACAAATA GAGAGATTAATGAAACGTGACTGTTTGACTCAAGAACAAGCTTACACTCGAATTAATAATCAGATGTCCCTATCAGAAAA ATGTCAAAAGGGGGATATTGTTGTGGATAATTCCTCTACCTTAGAAGCTTTGTTGAAGCAAGTAGACTTAGCGATCGCTC ATCAATAG
Upstream 100 bases:
>100_bases TTCTGAGTTTTGCCCTTCTAGAACTGTTCCATGGAACTTTTCTATTATGGGCTACTACTGTTTCTCTTGCTTTTGACTTT TAAATTTTAACTTAAAAATT
Downstream 100 bases:
>100_bases AATAGACTGGTTGGGAATTAAGCTAAAAAAGTAGTAGGGTCATTTCATTTTAACAAAATCATTGACAAATAGTCTTTTTT ATAATTCAATTGCGATGAAA
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRLIGLTGGISTGKTTVSNYLSKNYQFPIWDADVYGREAVKPGSSILKSIVEHYGQNIVLPNGNLDRRQLGEIVFNDQKE LLWLQKQIHPYVRDRFEQNIKYFIAKNSEFEQTNYIQVTSHKITSQDVTAVLVIPLLFEAKMTDLVTEIWVIYAPFQQQI ERLMKRDCLTQEQAYTRINNQMSLSEKCQKGDIVVDNSSTLEALLKQVDLAIAHQ
Sequences:
>Translated_215_residues MRLIGLTGGISTGKTTVSNYLSKNYQFPIWDADVYGREAVKPGSSILKSIVEHYGQNIVLPNGNLDRRQLGEIVFNDQKE LLWLQKQIHPYVRDRFEQNIKYFIAKNSEFEQTNYIQVTSHKITSQDVTAVLVIPLLFEAKMTDLVTEIWVIYAPFQQQI ERLMKRDCLTQEQAYTRINNQMSLSEKCQKGDIVVDNSSTLEALLKQVDLAIAHQ >Mature_215_residues MRLIGLTGGISTGKTTVSNYLSKNYQFPIWDADVYGREAVKPGSSILKSIVEHYGQNIVLPNGNLDRRQLGEIVFNDQKE LLWLQKQIHPYVRDRFEQNIKYFIAKNSEFEQTNYIQVTSHKITSQDVTAVLVIPLLFEAKMTDLVTEIWVIYAPFQQQI ERLMKRDCLTQEQAYTRINNQMSLSEKCQKGDIVVDNSSTLEALLKQVDLAIAHQ
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI191252797, Length=212, Percent_Identity=32.0754716981132, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI191252795, Length=212, Percent_Identity=32.0754716981132, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI110227607, Length=193, Percent_Identity=25.9067357512953, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI205277394, Length=195, Percent_Identity=25.1282051282051, Blast_Score=77, Evalue=8e-15, Organism=Homo sapiens, GI110227605, Length=195, Percent_Identity=25.1282051282051, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI110227603, Length=195, Percent_Identity=25.1282051282051, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI110227601, Length=195, Percent_Identity=25.1282051282051, Blast_Score=77, Evalue=9e-15, Organism=Escherichia coli, GI1786292, Length=215, Percent_Identity=27.906976744186, Blast_Score=97, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17554944, Length=216, Percent_Identity=30.5555555555556, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI25143409, Length=210, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6320402, Length=213, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=3e-27, Organism=Drosophila melanogaster, GI24644728, Length=203, Percent_Identity=32.0197044334975, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24658602, Length=211, Percent_Identity=26.5402843601896, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 24727; Mature: 24727
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS01294 COAE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIGLTGGISTGKTTVSNYLSKNYQFPIWDADVYGREAVKPGSSILKSIVEHYGQNIVL CEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCEEEE PNGNLDRRQLGEIVFNDQKELLWLQKQIHPYVRDRFEQNIKYFIAKNSEFEQTNYIQVTS CCCCCCHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEC HKITSQDVTAVLVIPLLFEAKMTDLVTEIWVIYAPFQQQIERLMKRDCLTQEQAYTRINN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCHHHHHHHHCC QMSLSEKCQKGDIVVDNSSTLEALLKQVDLAIAHQ CCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLIGLTGGISTGKTTVSNYLSKNYQFPIWDADVYGREAVKPGSSILKSIVEHYGQNIVL CEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCEEEE PNGNLDRRQLGEIVFNDQKELLWLQKQIHPYVRDRFEQNIKYFIAKNSEFEQTNYIQVTS CCCCCCHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEC HKITSQDVTAVLVIPLLFEAKMTDLVTEIWVIYAPFQQQIERLMKRDCLTQEQAYTRINN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCHHHHHHHHCC QMSLSEKCQKGDIVVDNSSTLEALLKQVDLAIAHQ CCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA