Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474242

Identifier: 113474242

GI number: 113474242

Start: 554156

End: 554713

Strand: Reverse

Name: 113474242

Synonym: Tery_0361

Alternate gene names: NA

Gene position: 554713-554156 (Counterclockwise)

Preceding gene: 113474243

Following gene: 113474239

Centisome position: 7.16

GC content: 31.72

Gene sequence:

>558_bases
ATGACTGAATTTAGTGATTTTAAATCCTTTATTGATTCTTGGGAAGATAGATTTGTTGAAGTAACAGAGTTTGACATATT
TAAACACAGTCCTCAGGGTAATATTAATAGTGATGGAACTGCTGCCTGTTGTGATTCGGCAATTTTTACTAAATATCATC
GTTATTTTAAACAGTCAATTGAACAAGGAGTTAGAGATTTAACTATTGCCCTAATTCTGAAATTAAATTGTATAACCTAT
TCTAGTTGTCAAGGTCATTTCTCTAGAGAAGATGCAGGGATGAGGCAGAGGTATGTAGCAGTTATGCCCCGGGATGAGGA
GGAATATCAATGCTTATTTAATACTTTTAATCAAATAGCTGAATTGACAAATGAGAGATTTTCTGAACATCCAGTGAAAG
TTTTTGTGGGTAATGATAATTTAAAAGATGAGGGGAAAATAATAAAATGTTTGACTTTGTTTTTTGTCTCAAATAATGCT
GATGAAGCTGAATATTTTCGAGGAATTGAACCTGTCTATAATTATGTTTTACAACAAGTTAATCAAGGCAAAAATTAG

Upstream 100 bases:

>100_bases
CCCTTCTTATTTTGTAGTTTTCGCCTTCTGAATTAAGCTATACATACTATATAATTATCTAGCTAACTATTGTTTTGGCA
TTAAAAAAATATTTAAAATT

Downstream 100 bases:

>100_bases
GATAAATTTGTATGTTTAAATTAGTTATAAAGTAGGAAAATTTTAGTTAAATTCCCTACTCTATAGCTGGATAAAATATT
TATCTAATTTATTTTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTEFSDFKSFIDSWEDRFVEVTEFDIFKHSPQGNINSDGTAACCDSAIFTKYHRYFKQSIEQGVRDLTIALILKLNCITY
SSCQGHFSREDAGMRQRYVAVMPRDEEEYQCLFNTFNQIAELTNERFSEHPVKVFVGNDNLKDEGKIIKCLTLFFVSNNA
DEAEYFRGIEPVYNYVLQQVNQGKN

Sequences:

>Translated_185_residues
MTEFSDFKSFIDSWEDRFVEVTEFDIFKHSPQGNINSDGTAACCDSAIFTKYHRYFKQSIEQGVRDLTIALILKLNCITY
SSCQGHFSREDAGMRQRYVAVMPRDEEEYQCLFNTFNQIAELTNERFSEHPVKVFVGNDNLKDEGKIIKCLTLFFVSNNA
DEAEYFRGIEPVYNYVLQQVNQGKN
>Mature_184_residues
TEFSDFKSFIDSWEDRFVEVTEFDIFKHSPQGNINSDGTAACCDSAIFTKYHRYFKQSIEQGVRDLTIALILKLNCITYS
SCQGHFSREDAGMRQRYVAVMPRDEEEYQCLFNTFNQIAELTNERFSEHPVKVFVGNDNLKDEGKIIKCLTLFFVSNNAD
EAEYFRGIEPVYNYVLQQVNQGKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21500; Mature: 21369

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFSDFKSFIDSWEDRFVEVTEFDIFKHSPQGNINSDGTAACCDSAIFTKYHRYFKQSI
CCCHHHHHHHHHHHHHHEEEHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EQGVRDLTIALILKLNCITYSSCQGHFSREDAGMRQRYVAVMPRDEEEYQCLFNTFNQIA
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHH
ELTNERFSEHPVKVFVGNDNLKDEGKIIKCLTLFFVSNNADEAEYFRGIEPVYNYVLQQV
HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHH
NQGKN
HCCCC
>Mature Secondary Structure 
TEFSDFKSFIDSWEDRFVEVTEFDIFKHSPQGNINSDGTAACCDSAIFTKYHRYFKQSI
CCHHHHHHHHHHHHHHEEEHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EQGVRDLTIALILKLNCITYSSCQGHFSREDAGMRQRYVAVMPRDEEEYQCLFNTFNQIA
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHH
ELTNERFSEHPVKVFVGNDNLKDEGKIIKCLTLFFVSNNADEAEYFRGIEPVYNYVLQQV
HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHH
NQGKN
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA