Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474209

Identifier: 113474209

GI number: 113474209

Start: 498095

End: 498529

Strand: Reverse

Name: 113474209

Synonym: Tery_0322

Alternate gene names: NA

Gene position: 498529-498095 (Counterclockwise)

Preceding gene: 113474210

Following gene: 113474204

Centisome position: 6.43

GC content: 35.86

Gene sequence:

>435_bases
ATGAAAAAGCTGAACATTGTGGCCACTGCTTTGTCTACTGTGGCGATCGCTGGTAGTGTACTTTGTGCTAATTCTGTAGA
AGCTTGTCTTTTGAAGAAAATTCATGGTTCAACATCAGAAAAATCTTTAATTTCACCAAATTCTTGGTTAAGCAAAAAAC
TTCCTAATAGGTCTGACTTTGCTATTGCTGGTATTGCTGCTGCTTCTCTAGGTTTAACTGGGTTAGGTGCTTTTTTTACT
ACTCGTTATATTACTCGTAAAGCAGAAGCTAATATTGATGCTAGTGATGAATCAAAAGAAGTACCAGCAGAACAAACATT
TGTACAACAACATCCAGAAGCACCTGGTGGCCAACTAGATTTAGTTGAGGATAATTTGGTTGATAATATAGAATCAAAAG
TTGTCGCGGATAAAGAAATTTCTCTTTTGAAATAA

Upstream 100 bases:

>100_bases
TTCTGGAGATTAATAAAGTTAAGCTGAATACTTTTATTGCTACTTTTGGAAAATGATGTTAATATAATTATTTTAAGGAT
ATTTTATCAACTAAACTAAC

Downstream 100 bases:

>100_bases
TTTGATAATTAGAATAAGTAAAATAAATTTTATCTGAACTTCCAGTCTCTAAAAACTGGGAGTTTTTTGATATCCAGTAA
GGAATAGAAAAAAAAGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKKLNIVATALSTVAIAGSVLCANSVEACLLKKIHGSTSEKSLISPNSWLSKKLPNRSDFAIAGIAAASLGLTGLGAFFT
TRYITRKAEANIDASDESKEVPAEQTFVQQHPEAPGGQLDLVEDNLVDNIESKVVADKEISLLK

Sequences:

>Translated_144_residues
MKKLNIVATALSTVAIAGSVLCANSVEACLLKKIHGSTSEKSLISPNSWLSKKLPNRSDFAIAGIAAASLGLTGLGAFFT
TRYITRKAEANIDASDESKEVPAEQTFVQQHPEAPGGQLDLVEDNLVDNIESKVVADKEISLLK
>Mature_144_residues
MKKLNIVATALSTVAIAGSVLCANSVEACLLKKIHGSTSEKSLISPNSWLSKKLPNRSDFAIAGIAAASLGLTGLGAFFT
TRYITRKAEANIDASDESKEVPAEQTFVQQHPEAPGGQLDLVEDNLVDNIESKVVADKEISLLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15253; Mature: 15253

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNIVATALSTVAIAGSVLCANSVEACLLKKIHGSTSEKSLISPNSWLSKKLPNRSDF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
AIAGIAAASLGLTGLGAFFTTRYITRKAEANIDASDESKEVPAEQTFVQQHPEAPGGQLD
HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEE
LVEDNLVDNIESKVVADKEISLLK
EECHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MKKLNIVATALSTVAIAGSVLCANSVEACLLKKIHGSTSEKSLISPNSWLSKKLPNRSDF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCC
AIAGIAAASLGLTGLGAFFTTRYITRKAEANIDASDESKEVPAEQTFVQQHPEAPGGQLD
HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEE
LVEDNLVDNIESKVVADKEISLLK
EECHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA