Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474210

Identifier: 113474210

GI number: 113474210

Start: 498617

End: 499183

Strand: Reverse

Name: 113474210

Synonym: Tery_0323

Alternate gene names: NA

Gene position: 499183-498617 (Counterclockwise)

Preceding gene: 113474217

Following gene: 113474209

Centisome position: 6.44

GC content: 30.69

Gene sequence:

>567_bases
ATGCCTAATATGAACTTTTATCATTTTTTATCTGATAAATCTCCCTTATATCAACCTCAGAAATACTTGAGTAAACCCTG
GGTATATTTAACAACAATACAACTTTTTACCTGTGGTTTATTGATGGCTATTCCTGAAGTAGCAACAGCCCAAGTAAATA
GAAAATCATTTATAATTTGCTCCAGAGATTTATTAAGTGTAGGTTTATCTGAAAGAGAGGTTGCTAATGCTTGTAGTGCA
GCTCTTAAACCAAAAGATTTATCAAAATGTGTCACAAAAATCTATGACAATACAACAGAAGAACTTTCCGCAGAAGAGAT
TTTATTGAATTGTCAAAAAGTGAGAAGAGTTGATGAATTAGGAACTTGTGTAGAAAGGATTAATAAATCAGTTCAAGATA
CATCTAATCAAGAGAATATCTTAGAAAGTTGTCGTATTAGTTTATTGCCAGAAAGTTTTTCTTCTTGTGTTATTGGTTTA
AATGCTAATTTAGGATTATCGACAGAAGAATTATTAACTACTTGTCTTAATCCTAACCAAGAAAAAACTGAGCTTTCTGG
AGATTAA

Upstream 100 bases:

>100_bases
TCCTCATTAACATAAAATTTAGCCACAATCCTATATCATATACTATTGAATTACTACTTTGTCAATTTTTCACGATTGAG
TTTAGCTTTGATTATTTGTT

Downstream 100 bases:

>100_bases
TAAAGTTAAGCTGAATACTTTTATTGCTACTTTTGGAAAATGATGTTAATATAATTATTTTAAGGATATTTTATCAACTA
AACTAACATGAAAAAGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MPNMNFYHFLSDKSPLYQPQKYLSKPWVYLTTIQLFTCGLLMAIPEVATAQVNRKSFIICSRDLLSVGLSEREVANACSA
ALKPKDLSKCVTKIYDNTTEELSAEEILLNCQKVRRVDELGTCVERINKSVQDTSNQENILESCRISLLPESFSSCVIGL
NANLGLSTEELLTTCLNPNQEKTELSGD

Sequences:

>Translated_188_residues
MPNMNFYHFLSDKSPLYQPQKYLSKPWVYLTTIQLFTCGLLMAIPEVATAQVNRKSFIICSRDLLSVGLSEREVANACSA
ALKPKDLSKCVTKIYDNTTEELSAEEILLNCQKVRRVDELGTCVERINKSVQDTSNQENILESCRISLLPESFSSCVIGL
NANLGLSTEELLTTCLNPNQEKTELSGD
>Mature_187_residues
PNMNFYHFLSDKSPLYQPQKYLSKPWVYLTTIQLFTCGLLMAIPEVATAQVNRKSFIICSRDLLSVGLSEREVANACSAA
LKPKDLSKCVTKIYDNTTEELSAEEILLNCQKVRRVDELGTCVERINKSVQDTSNQENILESCRISLLPESFSSCVIGLN
ANLGLSTEELLTTCLNPNQEKTELSGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20990; Mature: 20859

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNMNFYHFLSDKSPLYQPQKYLSKPWVYLTTIQLFTCGLLMAIPEVATAQVNRKSFIIC
CCCCCEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
SRDLLSVGLSEREVANACSAALKPKDLSKCVTKIYDNTTEELSAEEILLNCQKVRRVDEL
CHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GTCVERINKSVQDTSNQENILESCRISLLPESFSSCVIGLNANLGLSTEELLTTCLNPNQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHEEEECCCCCCCCHHHHHHHHCCCCC
EKTELSGD
CCCCCCCC
>Mature Secondary Structure 
PNMNFYHFLSDKSPLYQPQKYLSKPWVYLTTIQLFTCGLLMAIPEVATAQVNRKSFIIC
CCCCEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
SRDLLSVGLSEREVANACSAALKPKDLSKCVTKIYDNTTEELSAEEILLNCQKVRRVDEL
CHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GTCVERINKSVQDTSNQENILESCRISLLPESFSSCVIGLNANLGLSTEELLTTCLNPNQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHEEEECCCCCCCCHHHHHHHHCCCCC
EKTELSGD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA