Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474203

Identifier: 113474203

GI number: 113474203

Start: 488541

End: 489149

Strand: Reverse

Name: 113474203

Synonym: Tery_0316

Alternate gene names: NA

Gene position: 489149-488541 (Counterclockwise)

Preceding gene: 113474204

Following gene: 113474202

Centisome position: 6.31

GC content: 35.14

Gene sequence:

>609_bases
ATGGCATCAGCTTATGTTTTTTGTCTAGTTATTGGGGGAGTGTTTGTTGCACTTTCGGCATTTGCAGGTCTAGATGGTGT
AGACTTTGATCAAGACTTTGAGGCAGACCTAGAAATAACTGACCAAGGAGATAAACAAGGTAATACCTCAATATATCAAT
ATGGTCGGCGGCTATGGCTACCATTATTTAGTTTAAAATTTTGGACTTTTGGGAGTTGCTTTTTTGGCTTAACTGGAGTT
TTATTACACTATCTTTCTCCCAACCTTTCACCAAAAATAATTGCTATTATTTCTATAATTGTTGGTATTTTATGTGGCAC
AATTATGGCATGGGTATTACATACTCTAAAAAATAGTCAGGTTAATAGTTTGGTGCGTAGTAATGATTTAGTCGGTCTTT
GGGGAACGGTTGAGATTCCTTTTGATAGAAATAGTAAGGGAAAAATTAGAGTAAGTGTTAAGGGATCTGTGGTAGCATTT
ACGGCTTTTACTGAAGAAAACAGGGAGTTTACTAAAAAAGAAAAAGTATTTATAGTAGGAGTAGAAAATAGTAGGGTATT
GGTAGTATCAGAAGATTCCCTAGCTAGATCTTATGATGAGAAATCTTAG

Upstream 100 bases:

>100_bases
GAAAAATACAAATTTTTTTTACAAAGTGTGTAAATAGAGAAACTAATTTGCCAGAATATAAATAGATAATAGGGTACAAA
AAAATCATGAAGGACATTTT

Downstream 100 bases:

>100_bases
AATTTTTTTGCTAAGAAACGAATCAAGATGAAAAATCAAACTCTAATGCTAGCTTATATATCAGTGGCAGTGAAAATATT
TGGCGGGATGTTAATAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MASAYVFCLVIGGVFVALSAFAGLDGVDFDQDFEADLEITDQGDKQGNTSIYQYGRRLWLPLFSLKFWTFGSCFFGLTGV
LLHYLSPNLSPKIIAIISIIVGILCGTIMAWVLHTLKNSQVNSLVRSNDLVGLWGTVEIPFDRNSKGKIRVSVKGSVVAF
TAFTEENREFTKKEKVFIVGVENSRVLVVSEDSLARSYDEKS

Sequences:

>Translated_202_residues
MASAYVFCLVIGGVFVALSAFAGLDGVDFDQDFEADLEITDQGDKQGNTSIYQYGRRLWLPLFSLKFWTFGSCFFGLTGV
LLHYLSPNLSPKIIAIISIIVGILCGTIMAWVLHTLKNSQVNSLVRSNDLVGLWGTVEIPFDRNSKGKIRVSVKGSVVAF
TAFTEENREFTKKEKVFIVGVENSRVLVVSEDSLARSYDEKS
>Mature_201_residues
ASAYVFCLVIGGVFVALSAFAGLDGVDFDQDFEADLEITDQGDKQGNTSIYQYGRRLWLPLFSLKFWTFGSCFFGLTGVL
LHYLSPNLSPKIIAIISIIVGILCGTIMAWVLHTLKNSQVNSLVRSNDLVGLWGTVEIPFDRNSKGKIRVSVKGSVVAFT
AFTEENREFTKKEKVFIVGVENSRVLVVSEDSLARSYDEKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22350; Mature: 22219

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAYVFCLVIGGVFVALSAFAGLDGVDFDQDFEADLEITDQGDKQGNTSIYQYGRRLWL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH
PLFSLKFWTFGSCFFGLTGVLLHYLSPNLSPKIIAIISIIVGILCGTIMAWVLHTLKNSQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VNSLVRSNDLVGLWGTVEIPFDRNSKGKIRVSVKGSVVAFTAFTEENREFTKKEKVFIVG
HHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCHHHHCCCCEEEEE
VENSRVLVVSEDSLARSYDEKS
ECCCEEEEEECCHHHHHCCCCC
>Mature Secondary Structure 
ASAYVFCLVIGGVFVALSAFAGLDGVDFDQDFEADLEITDQGDKQGNTSIYQYGRRLWL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH
PLFSLKFWTFGSCFFGLTGVLLHYLSPNLSPKIIAIISIIVGILCGTIMAWVLHTLKNSQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VNSLVRSNDLVGLWGTVEIPFDRNSKGKIRVSVKGSVVAFTAFTEENREFTKKEKVFIVG
HHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCHHHHCCCCEEEEE
VENSRVLVVSEDSLARSYDEKS
ECCCEEEEEECCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA