Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yuaG [H]

Identifier: 113474202

GI number: 113474202

Start: 486705

End: 488087

Strand: Reverse

Name: yuaG [H]

Synonym: Tery_0314

Alternate gene names: 113474202

Gene position: 488087-486705 (Counterclockwise)

Preceding gene: 113474203

Following gene: 113474201

Centisome position: 6.3

GC content: 39.05

Gene sequence:

>1383_bases
ATGCAAAATAGATTTTTAGAGTCAGAAATAAACAAAATACAAACTGTAGAAATAGCACAAGCTCCTAATGTAATAGATGG
TAGTCAAACTGATAATTTGAAAGGTGAAAATTCTACTTTACCCATAGCTCTATCTATATTTGGAGTATTAATACTCATCT
GGTTTATCAATACATTTATACAAATTTGTAAACCTAATGAAATTCTAATTTTATCCGGTCGTAAACGTCGACTTAAAGGA
GGACAAACAGTTGGTTATCGCGTAATCTTTGGTGGCAGAGCAATTCCCATTCCCATTCTGGAAACAACTAAAACCATGGA
CTTGCGAACAATGCCAGTGCCGGTGGAAGTGCGCAATGCCTATTCCAAAGGAGGTACTCCATTAAATATTCAAGCTATCG
CTAATATTAAAGTTTCGAGTGATCCGAAAATAGTAGGCAATGCTATAGAAAGATTTCTCGAACGCGATCGCTCAGAAATT
ACCCGTGTTGCCAGAGAAACCTTAGAAGGAAACCTGCGAGGTGTTGTTGCTACTCTTACCCCAGAACAATTAAATGAAGA
CCGTCTCCAATTTGCCGAACGTATTGCCGAAGATGTAAGTCGCGACTTAATTAAATTGGGTCTACAACTCGATATCCTGA
AAATTCAAAGCATTTCTGATGACGTAGACTACCTAAACTCCATCGGTCGCAAACAAATTGCTATGGTTCGCCGAGATGCA
GAAATTGCTGAATCTAATGCTCAAGCAGAAGCAGACCAGGTAGAAGCAGAGTCCAAACGAGAGTCAGAAATTGCTAAAAC
TCAGGCAGCTACATTGATAGTTCAGAAAGAAAACGAACTTCGTAAAATCAAAGCTGAATTGGAACAGCAAGCGCGTTCGG
AAGAAGAACGAACTATAGCAGCAGGCAAAGAAGCTAGAGCGAGAGCAGAACAATTATTGCAAACATTTCGCGCCGAATTA
GAAAGGTTACGTCTGGAAGCAGATCAAGTCTTGCCAGCAGAAGCGCAAAGGGAAGCTAAAGAATTATTAGCTAAGGGAAA
TGCCACTTCACTCTCGGAAAATGCTAAAGCTGAAGCTTTAGTTAACGATATACTTTCGTTAGTTTGGCAAGAGACTGGTA
AGGATGCTGCTGAGTTATTCTACTTACAGCAGATTAGCATGATTTTGCGGGAGTCTGCTAAGATTCCAGGGCAAGTTAAA
CTGGAAAATATTAATGTTATTGATAGTGGGGATGGTAAGTCGATCGCTAGTTTAATAAATGCCTATCCGGAAATCTTCCG
CCAGTTCCTCAAAAATGTTAATCAAACTCTTGGCATTGATGTAACAGGAAATTTAAGCAGTCATAATAGTAAAAAAGTTG
AATTTATGGGAACTCAAAAATAG

Upstream 100 bases:

>100_bases
TTTACTACAATAAATAAAAATGAGTAGTTAATGATACTAAATTGTCATTTTAAAAAATTGATAATTTATTTCAAAATAAG
TTATTCAGGAAATATAGCTC

Downstream 100 bases:

>100_bases
AGTTTTTTTTATTTGATAATTTGCTTCATAAACCTTGATAATAGGTATTTTTTACAAGCAGTTTCAATGAAAAAAATGGT
TGTATTTATAGAGATGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MQNRFLESEINKIQTVEIAQAPNVIDGSQTDNLKGENSTLPIALSIFGVLILIWFINTFIQICKPNEILILSGRKRRLKG
GQTVGYRVIFGGRAIPIPILETTKTMDLRTMPVPVEVRNAYSKGGTPLNIQAIANIKVSSDPKIVGNAIERFLERDRSEI
TRVARETLEGNLRGVVATLTPEQLNEDRLQFAERIAEDVSRDLIKLGLQLDILKIQSISDDVDYLNSIGRKQIAMVRRDA
EIAESNAQAEADQVEAESKRESEIAKTQAATLIVQKENELRKIKAELEQQARSEEERTIAAGKEARARAEQLLQTFRAEL
ERLRLEADQVLPAEAQREAKELLAKGNATSLSENAKAEALVNDILSLVWQETGKDAAELFYLQQISMILRESAKIPGQVK
LENINVIDSGDGKSIASLINAYPEIFRQFLKNVNQTLGIDVTGNLSSHNSKKVEFMGTQK

Sequences:

>Translated_460_residues
MQNRFLESEINKIQTVEIAQAPNVIDGSQTDNLKGENSTLPIALSIFGVLILIWFINTFIQICKPNEILILSGRKRRLKG
GQTVGYRVIFGGRAIPIPILETTKTMDLRTMPVPVEVRNAYSKGGTPLNIQAIANIKVSSDPKIVGNAIERFLERDRSEI
TRVARETLEGNLRGVVATLTPEQLNEDRLQFAERIAEDVSRDLIKLGLQLDILKIQSISDDVDYLNSIGRKQIAMVRRDA
EIAESNAQAEADQVEAESKRESEIAKTQAATLIVQKENELRKIKAELEQQARSEEERTIAAGKEARARAEQLLQTFRAEL
ERLRLEADQVLPAEAQREAKELLAKGNATSLSENAKAEALVNDILSLVWQETGKDAAELFYLQQISMILRESAKIPGQVK
LENINVIDSGDGKSIASLINAYPEIFRQFLKNVNQTLGIDVTGNLSSHNSKKVEFMGTQK
>Mature_460_residues
MQNRFLESEINKIQTVEIAQAPNVIDGSQTDNLKGENSTLPIALSIFGVLILIWFINTFIQICKPNEILILSGRKRRLKG
GQTVGYRVIFGGRAIPIPILETTKTMDLRTMPVPVEVRNAYSKGGTPLNIQAIANIKVSSDPKIVGNAIERFLERDRSEI
TRVARETLEGNLRGVVATLTPEQLNEDRLQFAERIAEDVSRDLIKLGLQLDILKIQSISDDVDYLNSIGRKQIAMVRRDA
EIAESNAQAEADQVEAESKRESEIAKTQAATLIVQKENELRKIKAELEQQARSEEERTIAAGKEARARAEQLLQTFRAEL
ERLRLEADQVLPAEAQREAKELLAKGNATSLSENAKAEALVNDILSLVWQETGKDAAELFYLQQISMILRESAKIPGQVK
LENINVIDSGDGKSIASLINAYPEIFRQFLKNVNQTLGIDVTGNLSSHNSKKVEFMGTQK

Specific function: Unknown

COG id: COG2268

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqiK and Synechocystis PCC 6803 sll1021 [H]

Homologues:

Organism=Homo sapiens, GI5031699, Length=324, Percent_Identity=30.5555555555556, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI94538362, Length=420, Percent_Identity=28.0952380952381, Blast_Score=127, Evalue=3e-29,
Organism=Drosophila melanogaster, GI17137546, Length=333, Percent_Identity=30.3303303303303, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24642033, Length=318, Percent_Identity=28.9308176100629, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24642031, Length=318, Percent_Identity=28.9308176100629, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24653894, Length=337, Percent_Identity=29.9703264094956, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24642029, Length=331, Percent_Identity=28.7009063444109, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24642027, Length=331, Percent_Identity=28.7009063444109, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24642061, Length=235, Percent_Identity=30.2127659574468, Blast_Score=86, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 51207; Mature: 51207

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRFLESEINKIQTVEIAQAPNVIDGSQTDNLKGENSTLPIALSIFGVLILIWFINTFI
CCCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QICKPNEILILSGRKRRLKGGQTVGYRVIFGGRAIPIPILETTKTMDLRTMPVPVEVRNA
HHCCCCEEEEECCCCHHCCCCCEEEEEEEECCCCCCCCEECCCCCCCEECCCCCHHHHHH
YSKGGTPLNIQAIANIKVSSDPKIVGNAIERFLERDRSEITRVARETLEGNLRGVVATLT
HCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PEQLNEDRLQFAERIAEDVSRDLIKLGLQLDILKIQSISDDVDYLNSIGRKQIAMVRRDA
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHH
EIAESNAQAEADQVEAESKRESEIAKTQAATLIVQKENELRKIKAELEQQARSEEERTIA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
AGKEARARAEQLLQTFRAELERLRLEADQVLPAEAQREAKELLAKGNATSLSENAKAEAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VNDILSLVWQETGKDAAELFYLQQISMILRESAKIPGQVKLENINVIDSGDGKSIASLIN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHH
AYPEIFRQFLKNVNQTLGIDVTGNLSSHNSKKVEFMGTQK
HHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MQNRFLESEINKIQTVEIAQAPNVIDGSQTDNLKGENSTLPIALSIFGVLILIWFINTFI
CCCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QICKPNEILILSGRKRRLKGGQTVGYRVIFGGRAIPIPILETTKTMDLRTMPVPVEVRNA
HHCCCCEEEEECCCCHHCCCCCEEEEEEEECCCCCCCCEECCCCCCCEECCCCCHHHHHH
YSKGGTPLNIQAIANIKVSSDPKIVGNAIERFLERDRSEITRVARETLEGNLRGVVATLT
HCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PEQLNEDRLQFAERIAEDVSRDLIKLGLQLDILKIQSISDDVDYLNSIGRKQIAMVRRDA
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHH
EIAESNAQAEADQVEAESKRESEIAKTQAATLIVQKENELRKIKAELEQQARSEEERTIA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
AGKEARARAEQLLQTFRAELERLRLEADQVLPAEAQREAKELLAKGNATSLSENAKAEAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VNDILSLVWQETGKDAAELFYLQQISMILRESAKIPGQVKLENINVIDSGDGKSIASLIN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHH
AYPEIFRQFLKNVNQTLGIDVTGNLSSHNSKKVEFMGTQK
HHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]