| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is yuaG [H]
Identifier: 113474202
GI number: 113474202
Start: 486705
End: 488087
Strand: Reverse
Name: yuaG [H]
Synonym: Tery_0314
Alternate gene names: 113474202
Gene position: 488087-486705 (Counterclockwise)
Preceding gene: 113474203
Following gene: 113474201
Centisome position: 6.3
GC content: 39.05
Gene sequence:
>1383_bases ATGCAAAATAGATTTTTAGAGTCAGAAATAAACAAAATACAAACTGTAGAAATAGCACAAGCTCCTAATGTAATAGATGG TAGTCAAACTGATAATTTGAAAGGTGAAAATTCTACTTTACCCATAGCTCTATCTATATTTGGAGTATTAATACTCATCT GGTTTATCAATACATTTATACAAATTTGTAAACCTAATGAAATTCTAATTTTATCCGGTCGTAAACGTCGACTTAAAGGA GGACAAACAGTTGGTTATCGCGTAATCTTTGGTGGCAGAGCAATTCCCATTCCCATTCTGGAAACAACTAAAACCATGGA CTTGCGAACAATGCCAGTGCCGGTGGAAGTGCGCAATGCCTATTCCAAAGGAGGTACTCCATTAAATATTCAAGCTATCG CTAATATTAAAGTTTCGAGTGATCCGAAAATAGTAGGCAATGCTATAGAAAGATTTCTCGAACGCGATCGCTCAGAAATT ACCCGTGTTGCCAGAGAAACCTTAGAAGGAAACCTGCGAGGTGTTGTTGCTACTCTTACCCCAGAACAATTAAATGAAGA CCGTCTCCAATTTGCCGAACGTATTGCCGAAGATGTAAGTCGCGACTTAATTAAATTGGGTCTACAACTCGATATCCTGA AAATTCAAAGCATTTCTGATGACGTAGACTACCTAAACTCCATCGGTCGCAAACAAATTGCTATGGTTCGCCGAGATGCA GAAATTGCTGAATCTAATGCTCAAGCAGAAGCAGACCAGGTAGAAGCAGAGTCCAAACGAGAGTCAGAAATTGCTAAAAC TCAGGCAGCTACATTGATAGTTCAGAAAGAAAACGAACTTCGTAAAATCAAAGCTGAATTGGAACAGCAAGCGCGTTCGG AAGAAGAACGAACTATAGCAGCAGGCAAAGAAGCTAGAGCGAGAGCAGAACAATTATTGCAAACATTTCGCGCCGAATTA GAAAGGTTACGTCTGGAAGCAGATCAAGTCTTGCCAGCAGAAGCGCAAAGGGAAGCTAAAGAATTATTAGCTAAGGGAAA TGCCACTTCACTCTCGGAAAATGCTAAAGCTGAAGCTTTAGTTAACGATATACTTTCGTTAGTTTGGCAAGAGACTGGTA AGGATGCTGCTGAGTTATTCTACTTACAGCAGATTAGCATGATTTTGCGGGAGTCTGCTAAGATTCCAGGGCAAGTTAAA CTGGAAAATATTAATGTTATTGATAGTGGGGATGGTAAGTCGATCGCTAGTTTAATAAATGCCTATCCGGAAATCTTCCG CCAGTTCCTCAAAAATGTTAATCAAACTCTTGGCATTGATGTAACAGGAAATTTAAGCAGTCATAATAGTAAAAAAGTTG AATTTATGGGAACTCAAAAATAG
Upstream 100 bases:
>100_bases TTTACTACAATAAATAAAAATGAGTAGTTAATGATACTAAATTGTCATTTTAAAAAATTGATAATTTATTTCAAAATAAG TTATTCAGGAAATATAGCTC
Downstream 100 bases:
>100_bases AGTTTTTTTTATTTGATAATTTGCTTCATAAACCTTGATAATAGGTATTTTTTACAAGCAGTTTCAATGAAAAAAATGGT TGTATTTATAGAGATGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MQNRFLESEINKIQTVEIAQAPNVIDGSQTDNLKGENSTLPIALSIFGVLILIWFINTFIQICKPNEILILSGRKRRLKG GQTVGYRVIFGGRAIPIPILETTKTMDLRTMPVPVEVRNAYSKGGTPLNIQAIANIKVSSDPKIVGNAIERFLERDRSEI TRVARETLEGNLRGVVATLTPEQLNEDRLQFAERIAEDVSRDLIKLGLQLDILKIQSISDDVDYLNSIGRKQIAMVRRDA EIAESNAQAEADQVEAESKRESEIAKTQAATLIVQKENELRKIKAELEQQARSEEERTIAAGKEARARAEQLLQTFRAEL ERLRLEADQVLPAEAQREAKELLAKGNATSLSENAKAEALVNDILSLVWQETGKDAAELFYLQQISMILRESAKIPGQVK LENINVIDSGDGKSIASLINAYPEIFRQFLKNVNQTLGIDVTGNLSSHNSKKVEFMGTQK
Sequences:
>Translated_460_residues MQNRFLESEINKIQTVEIAQAPNVIDGSQTDNLKGENSTLPIALSIFGVLILIWFINTFIQICKPNEILILSGRKRRLKG GQTVGYRVIFGGRAIPIPILETTKTMDLRTMPVPVEVRNAYSKGGTPLNIQAIANIKVSSDPKIVGNAIERFLERDRSEI TRVARETLEGNLRGVVATLTPEQLNEDRLQFAERIAEDVSRDLIKLGLQLDILKIQSISDDVDYLNSIGRKQIAMVRRDA EIAESNAQAEADQVEAESKRESEIAKTQAATLIVQKENELRKIKAELEQQARSEEERTIAAGKEARARAEQLLQTFRAEL ERLRLEADQVLPAEAQREAKELLAKGNATSLSENAKAEALVNDILSLVWQETGKDAAELFYLQQISMILRESAKIPGQVK LENINVIDSGDGKSIASLINAYPEIFRQFLKNVNQTLGIDVTGNLSSHNSKKVEFMGTQK >Mature_460_residues MQNRFLESEINKIQTVEIAQAPNVIDGSQTDNLKGENSTLPIALSIFGVLILIWFINTFIQICKPNEILILSGRKRRLKG GQTVGYRVIFGGRAIPIPILETTKTMDLRTMPVPVEVRNAYSKGGTPLNIQAIANIKVSSDPKIVGNAIERFLERDRSEI TRVARETLEGNLRGVVATLTPEQLNEDRLQFAERIAEDVSRDLIKLGLQLDILKIQSISDDVDYLNSIGRKQIAMVRRDA EIAESNAQAEADQVEAESKRESEIAKTQAATLIVQKENELRKIKAELEQQARSEEERTIAAGKEARARAEQLLQTFRAEL ERLRLEADQVLPAEAQREAKELLAKGNATSLSENAKAEALVNDILSLVWQETGKDAAELFYLQQISMILRESAKIPGQVK LENINVIDSGDGKSIASLINAYPEIFRQFLKNVNQTLGIDVTGNLSSHNSKKVEFMGTQK
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To E.coli yqiK and Synechocystis PCC 6803 sll1021 [H]
Homologues:
Organism=Homo sapiens, GI5031699, Length=324, Percent_Identity=30.5555555555556, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI94538362, Length=420, Percent_Identity=28.0952380952381, Blast_Score=127, Evalue=3e-29, Organism=Drosophila melanogaster, GI17137546, Length=333, Percent_Identity=30.3303303303303, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24642033, Length=318, Percent_Identity=28.9308176100629, Blast_Score=115, Evalue=8e-26, Organism=Drosophila melanogaster, GI24642031, Length=318, Percent_Identity=28.9308176100629, Blast_Score=115, Evalue=8e-26, Organism=Drosophila melanogaster, GI24653894, Length=337, Percent_Identity=29.9703264094956, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24642029, Length=331, Percent_Identity=28.7009063444109, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24642027, Length=331, Percent_Identity=28.7009063444109, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24642061, Length=235, Percent_Identity=30.2127659574468, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 51207; Mature: 51207
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNRFLESEINKIQTVEIAQAPNVIDGSQTDNLKGENSTLPIALSIFGVLILIWFINTFI CCCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QICKPNEILILSGRKRRLKGGQTVGYRVIFGGRAIPIPILETTKTMDLRTMPVPVEVRNA HHCCCCEEEEECCCCHHCCCCCEEEEEEEECCCCCCCCEECCCCCCCEECCCCCHHHHHH YSKGGTPLNIQAIANIKVSSDPKIVGNAIERFLERDRSEITRVARETLEGNLRGVVATLT HCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC PEQLNEDRLQFAERIAEDVSRDLIKLGLQLDILKIQSISDDVDYLNSIGRKQIAMVRRDA HHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHH EIAESNAQAEADQVEAESKRESEIAKTQAATLIVQKENELRKIKAELEQQARSEEERTIA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHH AGKEARARAEQLLQTFRAELERLRLEADQVLPAEAQREAKELLAKGNATSLSENAKAEAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH VNDILSLVWQETGKDAAELFYLQQISMILRESAKIPGQVKLENINVIDSGDGKSIASLIN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHH AYPEIFRQFLKNVNQTLGIDVTGNLSSHNSKKVEFMGTQK HHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCC >Mature Secondary Structure MQNRFLESEINKIQTVEIAQAPNVIDGSQTDNLKGENSTLPIALSIFGVLILIWFINTFI CCCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QICKPNEILILSGRKRRLKGGQTVGYRVIFGGRAIPIPILETTKTMDLRTMPVPVEVRNA HHCCCCEEEEECCCCHHCCCCCEEEEEEEECCCCCCCCEECCCCCCCEECCCCCHHHHHH YSKGGTPLNIQAIANIKVSSDPKIVGNAIERFLERDRSEITRVARETLEGNLRGVVATLT HCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC PEQLNEDRLQFAERIAEDVSRDLIKLGLQLDILKIQSISDDVDYLNSIGRKQIAMVRRDA HHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHH EIAESNAQAEADQVEAESKRESEIAKTQAATLIVQKENELRKIKAELEQQARSEEERTIA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHH AGKEARARAEQLLQTFRAELERLRLEADQVLPAEAQREAKELLAKGNATSLSENAKAEAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH VNDILSLVWQETGKDAAELFYLQQISMILRESAKIPGQVKLENINVIDSGDGKSIASLIN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHH AYPEIFRQFLKNVNQTLGIDVTGNLSSHNSKKVEFMGTQK HHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]