| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is yuaG [H]
Identifier: 113474201
GI number: 113474201
Start: 484911
End: 486182
Strand: Reverse
Name: yuaG [H]
Synonym: Tery_0313
Alternate gene names: 113474201
Gene position: 486182-484911 (Counterclockwise)
Preceding gene: 113474202
Following gene: 113474197
Centisome position: 6.27
GC content: 42.53
Gene sequence:
>1272_bases ATGGAAATCATATTAGCATTACTGGCAGTTTTCGGATTAGGCTCTGGTGCGGGTCTCTTTGTAATTCGCAATCTTTATTA CATTTGCCAACCAAGTGAAGTCCTAATTTTTGCTGGTAGTCGTCACCGTGTTGGAGACAGCAAGCAAAAAGTGGGATATC GTTTAGTAAAAGGTGGTAGTAGTGTTCGTGTACCTCTATTAGAACAAGCTTTTCGCATGGACTTGAGTAATATGATTATT GAACTCAAGGTTAATAATGCTTATTCTAAAGGTGGTATTCCCCTGACAGTGGAAAGTGTGGCAAATATCAAAGTAGCTGG GGAGGAACCTACGATTCATAATGCGATCGAACGGTTGCTAGGAAAATCTCGCCAGGAGATCGAAAAACTAGCTCAGGAAA CTCTAGAGGGAAATTTGCGCGGTGTTTTAGCTTCTTTGACACCGGAACAGGTGAATGAGGATAAAATTGCTTTTGCAAAA AACTTACTAGAAGAGGCAGAAGACGACTTAGAAAAGTTAGGTTTGGTATTAGATACTCTGAAAATTCAGAATATTTCCGA TGAAGTGGAATATCTTTATTCTATTGGTCGTAAGCAACAGGCGGAACTTGTACGAGATTCTCGCATCGCTGAAGCTAAAA GTCAGGCTGAATCAATTATACAGGATGCAGAAAACCAGAGAAATACTGCTCTCAAAAAGATTGAAGCTGAAATTGAGATT GCTCATGCAGATGCAGAAAAACGGATTCAAGATGCGATAACGAAACGGGAAGCTGTGGTAGCTGAGGCAGAAGCAGAGAT AGGAGCAAAAGTAGCACGAACTAAGGCTGAGGTAGCGGTACAGCACGAGCAGATCAAACAAGTAAAACAAAGGTTACAGG CGGATGTGGTGGCTCCGGCAGAAGCTGAATGTAAGCAGGCGATCGCTCGGGCTAAAGGAAATGCTGCTGCTATTGTGGAA CCAGGGAAGGCACAAGCTGAGGGTATTCGCAAGTTGGCGGAATCTTGGAAAGCAGCAGGTGCAAATGCACGGGATGTTTT TCTGTATCAGAAGTTGGAAGAGTTGCTAAAGATTATAGTGTCTACTGTCCCTGAGGTTGAGGTAGATAATGTGACTGTAA TTAATGCTCAAAGTGGGAGCAATGCTACAAAAATGGCTGCTTTCTTTGAGGAGTTAAAGCAAACTGCTGGTATTGATATA CCTGCTACTGTGGAAAATCTGACAGCAGGGAGGGATACATCGCAAATTACTAGTCAGAAGTCAACGGATTAA
Upstream 100 bases:
>100_bases AAACAATGAGTGTAATGCTGCTGAATTAATCCCCGATTATTTATAAAAATTATTTTTTCAGCCTTGGTATTACTAACTAA AATTACGGAGTCAAAAAATA
Downstream 100 bases:
>100_bases GAAGTTAAATTGTTGTGTAGCAGAGAAGATGCTAGCGCTACATATAACTAGATACAAAAAATGATACTTTGTAGGGACGT TGCATAAGGACGTCCCTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MEIILALLAVFGLGSGAGLFVIRNLYYICQPSEVLIFAGSRHRVGDSKQKVGYRLVKGGSSVRVPLLEQAFRMDLSNMII ELKVNNAYSKGGIPLTVESVANIKVAGEEPTIHNAIERLLGKSRQEIEKLAQETLEGNLRGVLASLTPEQVNEDKIAFAK NLLEEAEDDLEKLGLVLDTLKIQNISDEVEYLYSIGRKQQAELVRDSRIAEAKSQAESIIQDAENQRNTALKKIEAEIEI AHADAEKRIQDAITKREAVVAEAEAEIGAKVARTKAEVAVQHEQIKQVKQRLQADVVAPAEAECKQAIARAKGNAAAIVE PGKAQAEGIRKLAESWKAAGANARDVFLYQKLEELLKIIVSTVPEVEVDNVTVINAQSGSNATKMAAFFEELKQTAGIDI PATVENLTAGRDTSQITSQKSTD
Sequences:
>Translated_423_residues MEIILALLAVFGLGSGAGLFVIRNLYYICQPSEVLIFAGSRHRVGDSKQKVGYRLVKGGSSVRVPLLEQAFRMDLSNMII ELKVNNAYSKGGIPLTVESVANIKVAGEEPTIHNAIERLLGKSRQEIEKLAQETLEGNLRGVLASLTPEQVNEDKIAFAK NLLEEAEDDLEKLGLVLDTLKIQNISDEVEYLYSIGRKQQAELVRDSRIAEAKSQAESIIQDAENQRNTALKKIEAEIEI AHADAEKRIQDAITKREAVVAEAEAEIGAKVARTKAEVAVQHEQIKQVKQRLQADVVAPAEAECKQAIARAKGNAAAIVE PGKAQAEGIRKLAESWKAAGANARDVFLYQKLEELLKIIVSTVPEVEVDNVTVINAQSGSNATKMAAFFEELKQTAGIDI PATVENLTAGRDTSQITSQKSTD >Mature_423_residues MEIILALLAVFGLGSGAGLFVIRNLYYICQPSEVLIFAGSRHRVGDSKQKVGYRLVKGGSSVRVPLLEQAFRMDLSNMII ELKVNNAYSKGGIPLTVESVANIKVAGEEPTIHNAIERLLGKSRQEIEKLAQETLEGNLRGVLASLTPEQVNEDKIAFAK NLLEEAEDDLEKLGLVLDTLKIQNISDEVEYLYSIGRKQQAELVRDSRIAEAKSQAESIIQDAENQRNTALKKIEAEIEI AHADAEKRIQDAITKREAVVAEAEAEIGAKVARTKAEVAVQHEQIKQVKQRLQADVVAPAEAECKQAIARAKGNAAAIVE PGKAQAEGIRKLAESWKAAGANARDVFLYQKLEELLKIIVSTVPEVEVDNVTVINAQSGSNATKMAAFFEELKQTAGIDI PATVENLTAGRDTSQITSQKSTD
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To E.coli yqiK and Synechocystis PCC 6803 sll1021 [H]
Homologues:
Organism=Homo sapiens, GI5031699, Length=437, Percent_Identity=26.3157894736842, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI94538362, Length=426, Percent_Identity=28.6384976525822, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI17137546, Length=328, Percent_Identity=31.0975609756098, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI24653894, Length=332, Percent_Identity=30.7228915662651, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24642033, Length=323, Percent_Identity=27.8637770897833, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24642031, Length=323, Percent_Identity=27.8637770897833, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24642029, Length=336, Percent_Identity=27.3809523809524, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24642027, Length=336, Percent_Identity=27.3809523809524, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24642061, Length=237, Percent_Identity=28.2700421940928, Blast_Score=89, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 46043; Mature: 46043
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIILALLAVFGLGSGAGLFVIRNLYYICQPSEVLIFAGSRHRVGDSKQKVGYRLVKGGS CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCHHEEECCC SVRVPLLEQAFRMDLSNMIIELKVNNAYSKGGIPLTVESVANIKVAGEEPTIHNAIERLL CCCCHHHHHHHHHCHHHEEEEEEECCCCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHH GKSRQEIEKLAQETLEGNLRGVLASLTPEQVNEDKIAFAKNLLEEAEDDLEKLGLVLDTL CCCHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KIQNISDEVEYLYSIGRKQQAELVRDSRIAEAKSQAESIIQDAENQRNTALKKIEAEIEI HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE AHADAEKRIQDAITKREAVVAEAEAEIGAKVARTKAEVAVQHEQIKQVKQRLQADVVAPA ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EAECKQAIARAKGNAAAIVEPGKAQAEGIRKLAESWKAAGANARDVFLYQKLEELLKIIV HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH STVPEVEVDNVTVINAQSGSNATKMAAFFEELKQTAGIDIPATVENLTAGRDTSQITSQK HHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCC STD CCC >Mature Secondary Structure MEIILALLAVFGLGSGAGLFVIRNLYYICQPSEVLIFAGSRHRVGDSKQKVGYRLVKGGS CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCHHEEECCC SVRVPLLEQAFRMDLSNMIIELKVNNAYSKGGIPLTVESVANIKVAGEEPTIHNAIERLL CCCCHHHHHHHHHCHHHEEEEEEECCCCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHH GKSRQEIEKLAQETLEGNLRGVLASLTPEQVNEDKIAFAKNLLEEAEDDLEKLGLVLDTL CCCHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KIQNISDEVEYLYSIGRKQQAELVRDSRIAEAKSQAESIIQDAENQRNTALKKIEAEIEI HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE AHADAEKRIQDAITKREAVVAEAEAEIGAKVARTKAEVAVQHEQIKQVKQRLQADVVAPA ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EAECKQAIARAKGNAAAIVEPGKAQAEGIRKLAESWKAAGANARDVFLYQKLEELLKIIV HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH STVPEVEVDNVTVINAQSGSNATKMAAFFEELKQTAGIDIPATVENLTAGRDTSQITSQK HHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCC STD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]