Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yheT [C]

Identifier: 113474175

GI number: 113474175

Start: 433208

End: 434281

Strand: Reverse

Name: yheT [C]

Synonym: Tery_0281

Alternate gene names: 113474175

Gene position: 434281-433208 (Counterclockwise)

Preceding gene: 113474177

Following gene: 113474174

Centisome position: 5.6

GC content: 35.94

Gene sequence:

>1074_bases
ATGGGTAATCCTTCTTATTCCCCTCCGTGGTTCTTAAAAAACGGTTTAGCAATGACTCTCTATGCAACGTTTTGGATACC
CCGTTTTTGGGAAGAGACTATTAAATTTTCTAAGCTTTCTTACCAAGATATAATTTTTATTGGTGCAAATGATGTACCAA
TTTTTGGGTGGATGGCTATCCCAGAAAACCCAAAAGGTACAATTATTGGGACTTATGGAATTACAGGAGATTTAGATAAT
CAATGGTTCTTAAAGCTATTGGGACGAAAAGCCTATGCTCAAGGTTATGCCGTTGTTTTATTTGATTGGCGTGCCCACGG
TAAGACAGCATTACTATCACCAACTCTAACTTCAGACGGTATTTATGAAGGGCAAGATTTTGTTCATATTGCTGCTCAAG
CAAAAGCAATGGGTTGTCCACCTAATTTTTGGTTTACTGGATATTCTTTGGGAGGACAACTAACACTTTGGGGTGCTAAA
GTAGCAGAAAGTCTGGCTCCAGAATTAGGATTAGCAGAAACAGATATTGGTGGTTGTGCAGTTATTTGTCCCAGTCTAGA
AGCTCAACGTTCTCTCTCTTATTTAAATAGTTTTCCTCTAGGAAAACGCTTAGATAAAGGAATTACTAAAAACCTCAAAA
AATTAGCTTGGTTAATTCACGATTATCATCCAGATTTTATAGATATAGAGGCAATAGAACGGGCTAACTCTATCTGGAAA
TTTGATGCAGAATTTATTATCAAAAGCTTAGGATTCTCATCAGTAGAAGCTTATTATAAAGCAACAAGTCCTTTATATTT
TTTGCCTCATCTTCAGAAAAAAACATTGATTATTTATGCGGAAGATGATCCACTATTTGACCCAACAATTGTGCCAGAAT
TAAAAACTATTTGTCAAAATAATTCTGCTATTGATTTGATTTTAACTCGTTACGGTGGTCATGTAGCTCATATTAGCAAC
AAATCATGTCAAAAGCTTGCCCAAGATCCTGATATTTGGTGGGCATGGAATCGAGTTTTTGAATGGATTAAACAAAATGA
AACAGTAACATCAAGGACTGAAGTTGCTGTCTAA

Upstream 100 bases:

>100_bases
GATTTACACTTTATATACTTAGAATCTACTGTAATTTGATTACCATACTGATATACTTTCAGATTAACAAATTTAAGTTT
TATGAGATTAAGATTCATCT

Downstream 100 bases:

>100_bases
TTTTATCCTCAGGAGTTAGGTAATATTCCTAATTCCTGATAGTTCTTAATTTAGTAGTTAGTAGTTAGTCGTTAGTAGTT
AAAGGACCTTTTTTTTACTA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MGNPSYSPPWFLKNGLAMTLYATFWIPRFWEETIKFSKLSYQDIIFIGANDVPIFGWMAIPENPKGTIIGTYGITGDLDN
QWFLKLLGRKAYAQGYAVVLFDWRAHGKTALLSPTLTSDGIYEGQDFVHIAAQAKAMGCPPNFWFTGYSLGGQLTLWGAK
VAESLAPELGLAETDIGGCAVICPSLEAQRSLSYLNSFPLGKRLDKGITKNLKKLAWLIHDYHPDFIDIEAIERANSIWK
FDAEFIIKSLGFSSVEAYYKATSPLYFLPHLQKKTLIIYAEDDPLFDPTIVPELKTICQNNSAIDLILTRYGGHVAHISN
KSCQKLAQDPDIWWAWNRVFEWIKQNETVTSRTEVAV

Sequences:

>Translated_357_residues
MGNPSYSPPWFLKNGLAMTLYATFWIPRFWEETIKFSKLSYQDIIFIGANDVPIFGWMAIPENPKGTIIGTYGITGDLDN
QWFLKLLGRKAYAQGYAVVLFDWRAHGKTALLSPTLTSDGIYEGQDFVHIAAQAKAMGCPPNFWFTGYSLGGQLTLWGAK
VAESLAPELGLAETDIGGCAVICPSLEAQRSLSYLNSFPLGKRLDKGITKNLKKLAWLIHDYHPDFIDIEAIERANSIWK
FDAEFIIKSLGFSSVEAYYKATSPLYFLPHLQKKTLIIYAEDDPLFDPTIVPELKTICQNNSAIDLILTRYGGHVAHISN
KSCQKLAQDPDIWWAWNRVFEWIKQNETVTSRTEVAV
>Mature_356_residues
GNPSYSPPWFLKNGLAMTLYATFWIPRFWEETIKFSKLSYQDIIFIGANDVPIFGWMAIPENPKGTIIGTYGITGDLDNQ
WFLKLLGRKAYAQGYAVVLFDWRAHGKTALLSPTLTSDGIYEGQDFVHIAAQAKAMGCPPNFWFTGYSLGGQLTLWGAKV
AESLAPELGLAETDIGGCAVICPSLEAQRSLSYLNSFPLGKRLDKGITKNLKKLAWLIHDYHPDFIDIEAIERANSIWKF
DAEFIIKSLGFSSVEAYYKATSPLYFLPHLQKKTLIIYAEDDPLFDPTIVPELKTICQNNSAIDLILTRYGGHVAHISNK
SCQKLAQDPDIWWAWNRVFEWIKQNETVTSRTEVAV

Specific function: Unknown

COG id: COG0429

COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012020
- InterPro:   IPR000073
- InterPro:   IPR000952 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 40191; Mature: 40060

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNPSYSPPWFLKNGLAMTLYATFWIPRFWEETIKFSKLSYQDIIFIGANDVPIFGWMAI
CCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEC
PENPKGTIIGTYGITGDLDNQWFLKLLGRKAYAQGYAVVLFDWRAHGKTALLSPTLTSDG
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEECCCCCCCC
IYEGQDFVHIAAQAKAMGCPPNFWFTGYSLGGQLTLWGAKVAESLAPELGLAETDIGGCA
CCCCCCEEEEEEHHHHCCCCCCCEEEEEECCCEEEEEHHHHHHHHCCCCCCCCCCCCCEE
VICPSLEAQRSLSYLNSFPLGKRLDKGITKNLKKLAWLIHDYHPDFIDIEAIERANSIWK
EECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEE
FDAEFIIKSLGFSSVEAYYKATSPLYFLPHLQKKTLIIYAEDDPLFDPTIVPELKTICQN
ECHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHCC
NSAIDLILTRYGGHVAHISNKSCQKLAQDPDIWWAWNRVFEWIKQNETVTSRTEVAV
CCEEEEEEEECCCEEEEECCHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GNPSYSPPWFLKNGLAMTLYATFWIPRFWEETIKFSKLSYQDIIFIGANDVPIFGWMAI
CCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEC
PENPKGTIIGTYGITGDLDNQWFLKLLGRKAYAQGYAVVLFDWRAHGKTALLSPTLTSDG
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEECCCCCCCC
IYEGQDFVHIAAQAKAMGCPPNFWFTGYSLGGQLTLWGAKVAESLAPELGLAETDIGGCA
CCCCCCEEEEEEHHHHCCCCCCCEEEEEECCCEEEEEHHHHHHHHCCCCCCCCCCCCCEE
VICPSLEAQRSLSYLNSFPLGKRLDKGITKNLKKLAWLIHDYHPDFIDIEAIERANSIWK
EECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEE
FDAEFIIKSLGFSSVEAYYKATSPLYFLPHLQKKTLIIYAEDDPLFDPTIVPELKTICQN
ECHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHCC
NSAIDLILTRYGGHVAHISNKSCQKLAQDPDIWWAWNRVFEWIKQNETVTSRTEVAV
CCEEEEEEEECCCEEEEECCHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]