| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474140
Identifier: 113474140
GI number: 113474140
Start: 379093
End: 380244
Strand: Reverse
Name: 113474140
Synonym: Tery_0242
Alternate gene names: NA
Gene position: 380244-379093 (Counterclockwise)
Preceding gene: 113474141
Following gene: 113474139
Centisome position: 4.91
GC content: 38.02
Gene sequence:
>1152_bases GTGTTGCTATCAAAAGGACTTGAACTAGAAATCTACACTGGCACATCCCAAGGAAACATAGTTGGCCTCTCAGAGCAAAT TGTGGAAAAATTAGAGGGGTTTGCTAGAGAACCAGATAGTAGAATTGTAGAGTACACTACTGCACCATTGTGTAGCTATG ATCGACTCTTATGTGCTCTAGTCAAGCCAAGACGAGAACTGCGAAAATACTTAACCACTTTAGGAGATTATACTATAATT CCAGGAAGCACCTTATCCCTTGGAAATAGTAATCTTTTTTATCCTTCTGACCCAAACAACCCATATTACAAATATATAGA GAAAACCTACTCTACCAAAATTGTTACAACCAGTATTCACATCAATATTGGTATTAGTGACCCAGAATTACTGATGCAGG CTATTCGCTTAATTCGGATGGAAGCTCCCTTATACTTAGCTCTTAGTGCCTCTTCTCCTTTTTTAGATACTCAAGTTACA GGGTTTCACTCTACTCGTTGGGCTACTTTTCCTAAAACTCCAACTGATGTCCCTCTGTTTGAAAGTCATAGTCATTTCAT AAAATGGACTGAAGAGCAAATTGCAGCAGGTCTTATGCAAAATGTCCGTCATCTTTGGTCTTCTGTGCGCCCTAATGGGG ACCGTCGTCCTTATAATCTTAATCGCTTAGAACTAAGAATCTGTGACTTTGTAGACAACCCAGTTATCCAACTAGCCCTA GTTGCCTTTTTAGAAGCTCGTTTATGGCAATTATTTGATCAGCCTCATCTTGATCCATTAGAAAAAAGTAATTTTCCTGG AACTAAGAGTTCGCAAGACTTAGTAGCTTTAGCAAATCATAATGAAACTGCAGTAGCTCATAATAGCTTAGAAGCTAAAC TCTGCCATTGGCAAGACGGTAGAAATATTCTAGCCAGACAATGGATAGAGGAAATCTATCAACAGGTTTTACCTTACGCT AAAAATCGTGGTTTTAGCTGCTTTCTTTCACCTATTAAAAAAATTCTTCGCGAAGGTAATACAGCACAAAAATTGTTACG GCAATATCAGAGTAGTTTGGACATTCAAAGTGTAATTAAAACCGCAACTTTAGAAATGGCACAACAAGAAGAAGAGTTAG AAGAGAAATTGTGTCAATCAATGGTTGCATAA
Upstream 100 bases:
>100_bases TCAAGTTCCCAACTTTCAATAAAACTAAAATCATAACTTACTAAAGTACAAATACGCGATAGGATAAAAAATATCAATAA ATTAGATTCAGGAGCCTGTC
Downstream 100 bases:
>100_bases CCAGAGATTTTTGATCATACCACTATTTATTTTTTCTCGTTCCTGTGCGGGGAAATTCCTAAGGGGTACTTTGGTATTTT TAAAGGACGAAAATTGTATT
Product: glutamate--cysteine ligase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MLLSKGLELEIYTGTSQGNIVGLSEQIVEKLEGFAREPDSRIVEYTTAPLCSYDRLLCALVKPRRELRKYLTTLGDYTII PGSTLSLGNSNLFYPSDPNNPYYKYIEKTYSTKIVTTSIHINIGISDPELLMQAIRLIRMEAPLYLALSASSPFLDTQVT GFHSTRWATFPKTPTDVPLFESHSHFIKWTEEQIAAGLMQNVRHLWSSVRPNGDRRPYNLNRLELRICDFVDNPVIQLAL VAFLEARLWQLFDQPHLDPLEKSNFPGTKSSQDLVALANHNETAVAHNSLEAKLCHWQDGRNILARQWIEEIYQQVLPYA KNRGFSCFLSPIKKILREGNTAQKLLRQYQSSLDIQSVIKTATLEMAQQEEELEEKLCQSMVA
Sequences:
>Translated_383_residues MLLSKGLELEIYTGTSQGNIVGLSEQIVEKLEGFAREPDSRIVEYTTAPLCSYDRLLCALVKPRRELRKYLTTLGDYTII PGSTLSLGNSNLFYPSDPNNPYYKYIEKTYSTKIVTTSIHINIGISDPELLMQAIRLIRMEAPLYLALSASSPFLDTQVT GFHSTRWATFPKTPTDVPLFESHSHFIKWTEEQIAAGLMQNVRHLWSSVRPNGDRRPYNLNRLELRICDFVDNPVIQLAL VAFLEARLWQLFDQPHLDPLEKSNFPGTKSSQDLVALANHNETAVAHNSLEAKLCHWQDGRNILARQWIEEIYQQVLPYA KNRGFSCFLSPIKKILREGNTAQKLLRQYQSSLDIQSVIKTATLEMAQQEEELEEKLCQSMVA >Mature_383_residues MLLSKGLELEIYTGTSQGNIVGLSEQIVEKLEGFAREPDSRIVEYTTAPLCSYDRLLCALVKPRRELRKYLTTLGDYTII PGSTLSLGNSNLFYPSDPNNPYYKYIEKTYSTKIVTTSIHINIGISDPELLMQAIRLIRMEAPLYLALSASSPFLDTQVT GFHSTRWATFPKTPTDVPLFESHSHFIKWTEEQIAAGLMQNVRHLWSSVRPNGDRRPYNLNRLELRICDFVDNPVIQLAL VAFLEARLWQLFDQPHLDPLEKSNFPGTKSSQDLVALANHNETAVAHNSLEAKLCHWQDGRNILARQWIEEIYQQVLPYA KNRGFSCFLSPIKKILREGNTAQKLLRQYQSSLDIQSVIKTATLEMAQQEEELEEKLCQSMVA
Specific function: ATP-dependent carboxylate-amine ligase [H]
COG id: COG2170
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carboxylate-amine ligase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011793 - InterPro: IPR006336 [H]
Pfam domain/function: PF04107 GCS2 [H]
EC number: NA
Molecular weight: Translated: 43679; Mature: 43679
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSKGLELEIYTGTSQGNIVGLSEQIVEKLEGFAREPDSRIVEYTTAPLCSYDRLLCAL CCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHH VKPRRELRKYLTTLGDYTIIPGSTLSLGNSNLFYPSDPNNPYYKYIEKTYSTKIVTTSIH HHHHHHHHHHHHHHCCEEECCCCEEECCCCCEECCCCCCCHHHHHHHHHHCCEEEEEEEE INIGISDPELLMQAIRLIRMEAPLYLALSASSPFLDTQVTGFHSTRWATFPKTPTDVPLF EEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCCCCEEECCCCCCCCCCC ESHSHFIKWTEEQIAAGLMQNVRHLWSSVRPNGDRRPYNLNRLELRICDFVDNPVIQLAL CCCCHHHEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHH VAFLEARLWQLFDQPHLDPLEKSNFPGTKSSQDLVALANHNETAVAHNSLEAKLCHWQDG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCHHHEECCCCC RNILARQWIEEIYQQVLPYAKNRGFSCFLSPIKKILREGNTAQKLLRQYQSSLDIQSVIK CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH TATLEMAQQEEELEEKLCQSMVA HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLSKGLELEIYTGTSQGNIVGLSEQIVEKLEGFAREPDSRIVEYTTAPLCSYDRLLCAL CCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHH VKPRRELRKYLTTLGDYTIIPGSTLSLGNSNLFYPSDPNNPYYKYIEKTYSTKIVTTSIH HHHHHHHHHHHHHHCCEEECCCCEEECCCCCEECCCCCCCHHHHHHHHHHCCEEEEEEEE INIGISDPELLMQAIRLIRMEAPLYLALSASSPFLDTQVTGFHSTRWATFPKTPTDVPLF EEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCCCCEEECCCCCCCCCCC ESHSHFIKWTEEQIAAGLMQNVRHLWSSVRPNGDRRPYNLNRLELRICDFVDNPVIQLAL CCCCHHHEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHH VAFLEARLWQLFDQPHLDPLEKSNFPGTKSSQDLVALANHNETAVAHNSLEAKLCHWQDG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCHHHEECCCCC RNILARQWIEEIYQQVLPYAKNRGFSCFLSPIKKILREGNTAQKLLRQYQSSLDIQSVIK CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH TATLEMAQQEEELEEKLCQSMVA HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA