Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474140

Identifier: 113474140

GI number: 113474140

Start: 379093

End: 380244

Strand: Reverse

Name: 113474140

Synonym: Tery_0242

Alternate gene names: NA

Gene position: 380244-379093 (Counterclockwise)

Preceding gene: 113474141

Following gene: 113474139

Centisome position: 4.91

GC content: 38.02

Gene sequence:

>1152_bases
GTGTTGCTATCAAAAGGACTTGAACTAGAAATCTACACTGGCACATCCCAAGGAAACATAGTTGGCCTCTCAGAGCAAAT
TGTGGAAAAATTAGAGGGGTTTGCTAGAGAACCAGATAGTAGAATTGTAGAGTACACTACTGCACCATTGTGTAGCTATG
ATCGACTCTTATGTGCTCTAGTCAAGCCAAGACGAGAACTGCGAAAATACTTAACCACTTTAGGAGATTATACTATAATT
CCAGGAAGCACCTTATCCCTTGGAAATAGTAATCTTTTTTATCCTTCTGACCCAAACAACCCATATTACAAATATATAGA
GAAAACCTACTCTACCAAAATTGTTACAACCAGTATTCACATCAATATTGGTATTAGTGACCCAGAATTACTGATGCAGG
CTATTCGCTTAATTCGGATGGAAGCTCCCTTATACTTAGCTCTTAGTGCCTCTTCTCCTTTTTTAGATACTCAAGTTACA
GGGTTTCACTCTACTCGTTGGGCTACTTTTCCTAAAACTCCAACTGATGTCCCTCTGTTTGAAAGTCATAGTCATTTCAT
AAAATGGACTGAAGAGCAAATTGCAGCAGGTCTTATGCAAAATGTCCGTCATCTTTGGTCTTCTGTGCGCCCTAATGGGG
ACCGTCGTCCTTATAATCTTAATCGCTTAGAACTAAGAATCTGTGACTTTGTAGACAACCCAGTTATCCAACTAGCCCTA
GTTGCCTTTTTAGAAGCTCGTTTATGGCAATTATTTGATCAGCCTCATCTTGATCCATTAGAAAAAAGTAATTTTCCTGG
AACTAAGAGTTCGCAAGACTTAGTAGCTTTAGCAAATCATAATGAAACTGCAGTAGCTCATAATAGCTTAGAAGCTAAAC
TCTGCCATTGGCAAGACGGTAGAAATATTCTAGCCAGACAATGGATAGAGGAAATCTATCAACAGGTTTTACCTTACGCT
AAAAATCGTGGTTTTAGCTGCTTTCTTTCACCTATTAAAAAAATTCTTCGCGAAGGTAATACAGCACAAAAATTGTTACG
GCAATATCAGAGTAGTTTGGACATTCAAAGTGTAATTAAAACCGCAACTTTAGAAATGGCACAACAAGAAGAAGAGTTAG
AAGAGAAATTGTGTCAATCAATGGTTGCATAA

Upstream 100 bases:

>100_bases
TCAAGTTCCCAACTTTCAATAAAACTAAAATCATAACTTACTAAAGTACAAATACGCGATAGGATAAAAAATATCAATAA
ATTAGATTCAGGAGCCTGTC

Downstream 100 bases:

>100_bases
CCAGAGATTTTTGATCATACCACTATTTATTTTTTCTCGTTCCTGTGCGGGGAAATTCCTAAGGGGTACTTTGGTATTTT
TAAAGGACGAAAATTGTATT

Product: glutamate--cysteine ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MLLSKGLELEIYTGTSQGNIVGLSEQIVEKLEGFAREPDSRIVEYTTAPLCSYDRLLCALVKPRRELRKYLTTLGDYTII
PGSTLSLGNSNLFYPSDPNNPYYKYIEKTYSTKIVTTSIHINIGISDPELLMQAIRLIRMEAPLYLALSASSPFLDTQVT
GFHSTRWATFPKTPTDVPLFESHSHFIKWTEEQIAAGLMQNVRHLWSSVRPNGDRRPYNLNRLELRICDFVDNPVIQLAL
VAFLEARLWQLFDQPHLDPLEKSNFPGTKSSQDLVALANHNETAVAHNSLEAKLCHWQDGRNILARQWIEEIYQQVLPYA
KNRGFSCFLSPIKKILREGNTAQKLLRQYQSSLDIQSVIKTATLEMAQQEEELEEKLCQSMVA

Sequences:

>Translated_383_residues
MLLSKGLELEIYTGTSQGNIVGLSEQIVEKLEGFAREPDSRIVEYTTAPLCSYDRLLCALVKPRRELRKYLTTLGDYTII
PGSTLSLGNSNLFYPSDPNNPYYKYIEKTYSTKIVTTSIHINIGISDPELLMQAIRLIRMEAPLYLALSASSPFLDTQVT
GFHSTRWATFPKTPTDVPLFESHSHFIKWTEEQIAAGLMQNVRHLWSSVRPNGDRRPYNLNRLELRICDFVDNPVIQLAL
VAFLEARLWQLFDQPHLDPLEKSNFPGTKSSQDLVALANHNETAVAHNSLEAKLCHWQDGRNILARQWIEEIYQQVLPYA
KNRGFSCFLSPIKKILREGNTAQKLLRQYQSSLDIQSVIKTATLEMAQQEEELEEKLCQSMVA
>Mature_383_residues
MLLSKGLELEIYTGTSQGNIVGLSEQIVEKLEGFAREPDSRIVEYTTAPLCSYDRLLCALVKPRRELRKYLTTLGDYTII
PGSTLSLGNSNLFYPSDPNNPYYKYIEKTYSTKIVTTSIHINIGISDPELLMQAIRLIRMEAPLYLALSASSPFLDTQVT
GFHSTRWATFPKTPTDVPLFESHSHFIKWTEEQIAAGLMQNVRHLWSSVRPNGDRRPYNLNRLELRICDFVDNPVIQLAL
VAFLEARLWQLFDQPHLDPLEKSNFPGTKSSQDLVALANHNETAVAHNSLEAKLCHWQDGRNILARQWIEEIYQQVLPYA
KNRGFSCFLSPIKKILREGNTAQKLLRQYQSSLDIQSVIKTATLEMAQQEEELEEKLCQSMVA

Specific function: ATP-dependent carboxylate-amine ligase [H]

COG id: COG2170

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carboxylate-amine ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011793
- InterPro:   IPR006336 [H]

Pfam domain/function: PF04107 GCS2 [H]

EC number: NA

Molecular weight: Translated: 43679; Mature: 43679

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSKGLELEIYTGTSQGNIVGLSEQIVEKLEGFAREPDSRIVEYTTAPLCSYDRLLCAL
CCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHH
VKPRRELRKYLTTLGDYTIIPGSTLSLGNSNLFYPSDPNNPYYKYIEKTYSTKIVTTSIH
HHHHHHHHHHHHHHCCEEECCCCEEECCCCCEECCCCCCCHHHHHHHHHHCCEEEEEEEE
INIGISDPELLMQAIRLIRMEAPLYLALSASSPFLDTQVTGFHSTRWATFPKTPTDVPLF
EEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCCCCEEECCCCCCCCCCC
ESHSHFIKWTEEQIAAGLMQNVRHLWSSVRPNGDRRPYNLNRLELRICDFVDNPVIQLAL
CCCCHHHEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHH
VAFLEARLWQLFDQPHLDPLEKSNFPGTKSSQDLVALANHNETAVAHNSLEAKLCHWQDG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCHHHEECCCCC
RNILARQWIEEIYQQVLPYAKNRGFSCFLSPIKKILREGNTAQKLLRQYQSSLDIQSVIK
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH
TATLEMAQQEEELEEKLCQSMVA
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLSKGLELEIYTGTSQGNIVGLSEQIVEKLEGFAREPDSRIVEYTTAPLCSYDRLLCAL
CCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHH
VKPRRELRKYLTTLGDYTIIPGSTLSLGNSNLFYPSDPNNPYYKYIEKTYSTKIVTTSIH
HHHHHHHHHHHHHHCCEEECCCCEEECCCCCEECCCCCCCHHHHHHHHHHCCEEEEEEEE
INIGISDPELLMQAIRLIRMEAPLYLALSASSPFLDTQVTGFHSTRWATFPKTPTDVPLF
EEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCCCCEEECCCCCCCCCCC
ESHSHFIKWTEEQIAAGLMQNVRHLWSSVRPNGDRRPYNLNRLELRICDFVDNPVIQLAL
CCCCHHHEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHH
VAFLEARLWQLFDQPHLDPLEKSNFPGTKSSQDLVALANHNETAVAHNSLEAKLCHWQDG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCHHHEECCCCC
RNILARQWIEEIYQQVLPYAKNRGFSCFLSPIKKILREGNTAQKLLRQYQSSLDIQSVIK
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH
TATLEMAQQEEELEEKLCQSMVA
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA