Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474109

Identifier: 113474109

GI number: 113474109

Start: 314229

End: 314588

Strand: Reverse

Name: 113474109

Synonym: Tery_0208

Alternate gene names: NA

Gene position: 314588-314229 (Counterclockwise)

Preceding gene: 113474111

Following gene: 113474107

Centisome position: 4.06

GC content: 27.22

Gene sequence:

>360_bases
ATGAAGAATTTATCTATAAATATAATTCAAGATATCAAAGATTGGAACTATAATAATTCACGGTTTATAGAAATAAAGTA
TGAAGATTTAATTCAAGGTATTGATATGAATTTATTTAGAAATATTTTTCAGTTTCTAGGTTTCAATAAGAAGATAATGG
CGAGTCTATTAAAAATAGCTTACAATAATAGTCTGTTTTCAGGTTTGGTGTCAAATAGAAAACATATAAGGTCAGGAAAA
AAGCAGCAGTGGAAAGAATATTTTAAACCAATTCACACAGCAAGATTTGTGGCCCTATTTGATGATGTTTTGGTTAAACT
GAATTATGAGAAAACTAATACAGGTTGGCTTGATAGATAA

Upstream 100 bases:

>100_bases
AGAAAAATGGTTACATATTAAAAGAGAATAGTTTTGAGGCTTGACTTATCAATAAAAACTAAATTCTTATTCATTTTTTG
ACGATAAGTTAATATTTAAA

Downstream 100 bases:

>100_bases
TCAAAATATTTCCAAAACAATTGATGTTGAAATTCATGATTTACACTTATTTATCTGACTTCTTAATGCCAATCTCTTGA
TTAGCTTTTACCTTTTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKNLSINIIQDIKDWNYNNSRFIEIKYEDLIQGIDMNLFRNIFQFLGFNKKIMASLLKIAYNNSLFSGLVSNRKHIRSGK
KQQWKEYFKPIHTARFVALFDDVLVKLNYEKTNTGWLDR

Sequences:

>Translated_119_residues
MKNLSINIIQDIKDWNYNNSRFIEIKYEDLIQGIDMNLFRNIFQFLGFNKKIMASLLKIAYNNSLFSGLVSNRKHIRSGK
KQQWKEYFKPIHTARFVALFDDVLVKLNYEKTNTGWLDR
>Mature_119_residues
MKNLSINIIQDIKDWNYNNSRFIEIKYEDLIQGIDMNLFRNIFQFLGFNKKIMASLLKIAYNNSLFSGLVSNRKHIRSGK
KQQWKEYFKPIHTARFVALFDDVLVKLNYEKTNTGWLDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14240; Mature: 14240

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLSINIIQDIKDWNYNNSRFIEIKYEDLIQGIDMNLFRNIFQFLGFNKKIMASLLKIA
CCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
YNNSLFSGLVSNRKHIRSGKKQQWKEYFKPIHTARFVALFDDVLVKLNYEKTNTGWLDR
HCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKNLSINIIQDIKDWNYNNSRFIEIKYEDLIQGIDMNLFRNIFQFLGFNKKIMASLLKIA
CCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
YNNSLFSGLVSNRKHIRSGKKQQWKEYFKPIHTARFVALFDDVLVKLNYEKTNTGWLDR
HCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA