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The map label for this gene is yedY [H]

Identifier: 113473985

GI number: 113473985

Start: 84932

End: 85924

Strand: Direct

Name: yedY [H]

Synonym: Tery_0060

Alternate gene names: 113473985

Gene position: 84932-85924 (Clockwise)

Preceding gene: 113473982

Following gene: 113473989

Centisome position: 1.1

GC content: 34.64

Gene sequence:

>993_bases
ATGCCCCTAATCCATATCAAAAAATCTTGGGAAATTCCTGAAAGAGAAATTACACCAGAAAAAGTTTATGTAAACCGCCG
TCGGTTTATGAAAAACCTGATAGGTACTGGTATAAGTTTTACTGCTTTATCTACTCTTACAAGCTGTGCTGAAAACTCAA
AAAAATCTCCAACTTATGAAGCAGTAAATTTACCAAAAATTAGCAATTTTACACCTAATTATAACTTCGCTAAACTTGAA
AGTTCAATAACTGATGAAGCTTTAGGAACAAAATATAATAATTTCTATGAATTTGGCGGTACTAAATCTATTTGGAAAAA
TGCTCAAGCTTTACCAACTGAAAATTGGCAAGTTGAAGTTACAGGTTTAGTCAAGAATTCTCGTATTTATGACATAGATG
AACTACAAAAAAGGTTTCCTCTCGAAGAAAGAATATATAGATTTCGGTGTGTCGAAGCTTGGGCAATGGTAATACCTTGG
CTTGGCTTTCCTATGAAGTTATTAATGGCTGATGTAGAACCAACATCAAAGGCTAAATATGTTCGTTTTACATCTTTTTA
TGACCCACAAATTACTAAAGGTCCGGGTTTTTGGGCAAGTGATTATCCTTGGCCTTATACGGAAGGTTTAAGAATAGATG
AAATGGCTAACGAATTAGCTTTTTTTGCTATGGGAATGTATGGTAAGTTATTACCGAAACAAAATGGAGCACCTCTAAGA
GAAGTTATTCCTTGGAAGTATGGTTTTAAAGGGGCAAAATCTATTGTAAAAATTGAATTTTTAGAACAAAGACCTGCAAC
ATTTTGGAATACTCTGATACCAAATGAATATGGTTTTGAAGCAAATGTTAATCCTGAGGTTCCTCACCCTCGATGGTCAC
AAGCAACGGAAAGAATAGTCAGTGAAGGTGCTAGTTGGTCTTGGGAAAAACGCCCGACTTTACTTTACAATGGTTACCAA
GAGTATGTTACTGATCTTTATAAAACCTATTAG

Upstream 100 bases:

>100_bases
TATAGTATCAATACCCTTAATAATATATATTATTAACTAGCTGCAAAAGTAATAATTTTTTTGTATTCTAGTTTAAACTC
ATAGTCACTAAAAATTAATT

Downstream 100 bases:

>100_bases
GGATAGCTGTACACAATACTATAGCTTAAGGCATAAGGCGCAAAGTTAATAGTTTGTAAGGACGAAGGCTATTTCCCTGT
GTATTCTGACTCTGAATAAA

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MPLIHIKKSWEIPEREITPEKVYVNRRRFMKNLIGTGISFTALSTLTSCAENSKKSPTYEAVNLPKISNFTPNYNFAKLE
SSITDEALGTKYNNFYEFGGTKSIWKNAQALPTENWQVEVTGLVKNSRIYDIDELQKRFPLEERIYRFRCVEAWAMVIPW
LGFPMKLLMADVEPTSKAKYVRFTSFYDPQITKGPGFWASDYPWPYTEGLRIDEMANELAFFAMGMYGKLLPKQNGAPLR
EVIPWKYGFKGAKSIVKIEFLEQRPATFWNTLIPNEYGFEANVNPEVPHPRWSQATERIVSEGASWSWEKRPTLLYNGYQ
EYVTDLYKTY

Sequences:

>Translated_330_residues
MPLIHIKKSWEIPEREITPEKVYVNRRRFMKNLIGTGISFTALSTLTSCAENSKKSPTYEAVNLPKISNFTPNYNFAKLE
SSITDEALGTKYNNFYEFGGTKSIWKNAQALPTENWQVEVTGLVKNSRIYDIDELQKRFPLEERIYRFRCVEAWAMVIPW
LGFPMKLLMADVEPTSKAKYVRFTSFYDPQITKGPGFWASDYPWPYTEGLRIDEMANELAFFAMGMYGKLLPKQNGAPLR
EVIPWKYGFKGAKSIVKIEFLEQRPATFWNTLIPNEYGFEANVNPEVPHPRWSQATERIVSEGASWSWEKRPTLLYNGYQ
EYVTDLYKTY
>Mature_329_residues
PLIHIKKSWEIPEREITPEKVYVNRRRFMKNLIGTGISFTALSTLTSCAENSKKSPTYEAVNLPKISNFTPNYNFAKLES
SITDEALGTKYNNFYEFGGTKSIWKNAQALPTENWQVEVTGLVKNSRIYDIDELQKRFPLEERIYRFRCVEAWAMVIPWL
GFPMKLLMADVEPTSKAKYVRFTSFYDPQITKGPGFWASDYPWPYTEGLRIDEMANELAFFAMGMYGKLLPKQNGAPLRE
VIPWKYGFKGAKSIVKIEFLEQRPATFWNTLIPNEYGFEANVNPEVPHPRWSQATERIVSEGASWSWEKRPTLLYNGYQE
YVTDLYKTY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=335, Percent_Identity=45.0746268656716, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 38388; Mature: 38257

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLIHIKKSWEIPEREITPEKVYVNRRRFMKNLIGTGISFTALSTLTSCAENSKKSPTYE
CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEE
AVNLPKISNFTPNYNFAKLESSITDEALGTKYNNFYEFGGTKSIWKNAQALPTENWQVEV
EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCCCCCCCCCCEEEE
TGLVKNSRIYDIDELQKRFPLEERIYRFRCVEAWAMVIPWLGFPMKLLMADVEPTSKAKY
EEEEECCCEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCE
VRFTSFYDPQITKGPGFWASDYPWPYTEGLRIDEMANELAFFAMGMYGKLLPKQNGAPLR
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EVIPWKYGFKGAKSIVKIEFLEQRPATFWNTLIPNEYGFEANVNPEVPHPRWSQATERIV
HHCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
SEGASWSWEKRPTLLYNGYQEYVTDLYKTY
HCCCCCCCCCCCCEEECCHHHHHHHHHHCC
>Mature Secondary Structure 
PLIHIKKSWEIPEREITPEKVYVNRRRFMKNLIGTGISFTALSTLTSCAENSKKSPTYE
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEE
AVNLPKISNFTPNYNFAKLESSITDEALGTKYNNFYEFGGTKSIWKNAQALPTENWQVEV
EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCCCCCCCCCCEEEE
TGLVKNSRIYDIDELQKRFPLEERIYRFRCVEAWAMVIPWLGFPMKLLMADVEPTSKAKY
EEEEECCCEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCE
VRFTSFYDPQITKGPGFWASDYPWPYTEGLRIDEMANELAFFAMGMYGKLLPKQNGAPLR
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EVIPWKYGFKGAKSIVKIEFLEQRPATFWNTLIPNEYGFEANVNPEVPHPRWSQATERIV
HHCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
SEGASWSWEKRPTLLYNGYQEYVTDLYKTY
HCCCCCCCCCCCCEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA