| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113473989
Identifier: 113473989
GI number: 113473989
Start: 94221
End: 94430
Strand: Direct
Name: 113473989
Synonym: Tery_0068
Alternate gene names: NA
Gene position: 94221-94430 (Clockwise)
Preceding gene: 113473985
Following gene: 113473990
Centisome position: 1.22
GC content: 40.48
Gene sequence:
>210_bases TTGAGAGTATTGTCTATGTTTCCATTCTTCGTTAAGTCCTGCTGTGGTGGGGACTTTTTTCAACCAGAAACTCGTAAGGC CCACCAGGAGAATAAACTTAAATTCCTTAAGTGGATGCGAGATGACTTAGAAACCAGATTGGCCGGACTTAATGCGGCTA TTCAAACTATAGAACGGCAAATAAATCAAGATCAAGATCAAGCTTCCTAA
Upstream 100 bases:
>100_bases AGAATAGGGCAGAAAAGGAAAAAATAGAACTATAATAATATTTGTATTTAGTGGGTGTCAATTTTTAAATTTTTGTTTCA AAATATTAAGTAAAGATGAG
Downstream 100 bases:
>100_bases GCTATCTAGAGTAGCTCCAGCTTTATTTCTTAAACTTTAACTACAGTTATCTATTTGATGGGGCGTAATATTTTTCGCCC CTTACTTTTATCTCCTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MRVLSMFPFFVKSCCGGDFFQPETRKAHQENKLKFLKWMRDDLETRLAGLNAAIQTIERQINQDQDQAS
Sequences:
>Translated_69_residues MRVLSMFPFFVKSCCGGDFFQPETRKAHQENKLKFLKWMRDDLETRLAGLNAAIQTIERQINQDQDQAS >Mature_69_residues MRVLSMFPFFVKSCCGGDFFQPETRKAHQENKLKFLKWMRDDLETRLAGLNAAIQTIERQINQDQDQAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8079; Mature: 8079
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLSMFPFFVKSCCGGDFFQPETRKAHQENKLKFLKWMRDDLETRLAGLNAAIQTIERQ CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INQDQDQAS HCCCCCCCC >Mature Secondary Structure MRVLSMFPFFVKSCCGGDFFQPETRKAHQENKLKFLKWMRDDLETRLAGLNAAIQTIERQ CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INQDQDQAS HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA