| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113473982
Identifier: 113473982
GI number: 113473982
Start: 78349
End: 81126
Strand: Direct
Name: 113473982
Synonym: Tery_0057
Alternate gene names: NA
Gene position: 78349-81126 (Clockwise)
Preceding gene: 113473981
Following gene: 113473985
Centisome position: 1.01
GC content: 30.6
Gene sequence:
>2778_bases TTGAAAGAGATTAATCAAAAAAAGCTGAATAATTCTTTAAATGGTGAAAAAATTGATTTTGATTTACTATGGAATACTAT TCAAGTAAAGAAAGATTTGTTGGAATTAATTCGGACTCCATTTTTGCTGTATGTTCTATCATCCACTTTAGTGTCAATTT ATCAACAAAATCCGAGTTCTATTTCTCAAGGGATAGAGGCTATTTATAAAGCAGTCAGTAATTTAGAAAAATTACTCGAT AAATTTGTTAGAGAACAGTACAAAAGAGAGTCTGGAAAGTCCAAAATACCGATACCATGGTCACTTAATAAAGTCAAGAG ATTATTAGGTCAAATTGCTGTATTAATGATGAGCGATCGCGAGCCAGATGATAATGAAATTTTGCCAGAACACTTCAATA AAGTAATTCAAATTCAAGAAGACATTAAAAAATTTATTGATTTGACTAAAAATCTATATTTATTAGAATCTGAAGAAAAA GCTAATAATCAGAACCCAACTTCAACCTATAAGTTTCGGCATTTAACACTACGTGATTATTTTGCTTTCGACTATGGTTC TAATTTTTTTGATCAACAAGAGGATAACTTCAACCAAAAATCTGAAAAATTTAAATTAGAAATAGAACCAGAACAAGTCG TAAAAGCGATTGGAAAAATCGAAAAAGAGCAAGTAGTTAAACTATTAACTAAGTTACTCGATCATCCTGATCCAGATGTA CGTTACGAAGCTATAAAGTCTTTAGGGGAATTGAGAACGCTAGTATATGTTGAAGGCTATAACAGCGATTTGAAAAATCA AGTTGTCAACTACTCTCTTGATGAATTTGATAAATCCCTAATTAAAGAATATTTTAGCGAAAAGAAATATTTTGAAATCA ATGATAATGAAGCCAAAAAAATATATCAGTACAGTGGTGGAAATGTTTGGATAATAGAGCAAATAGCTACCATGTTTGGT GTAGTTTCTTTAGATGAAATATTAGGTGTTGATGATGTTCCCATGCCTATCGCAGCTAAGAGTCCTGATGAACAAATTTT GGCAACAACTGTTCAACGTTTGTTACATTACTGTGTAAACAAGGAAGATAAACGCGCGGTTTACTTACTTGCCATAGCAT ATTGTCCAAATCCTGAATTTCTGAAATTCATGTTAGGTTGTGAAAACCTAGATGCTAAATTACAGGAATTACACAATAAT TACCCATTTATCTTGCCAGAAAAACAACAGCTAGAGGAGATACATCAGAAGTTTACGAAACAATACTTACTGTCACTGAG AAATGAAAATAATTTCAACAAGTATGAAAGTGAATCTCAAAAAATAGCTAAAAATCTTAATCGTAAGGCAGCACATTATT TTCAGGATAAGATAGAAGACTTAACTGGAAAACTAACAACAGCAAAACAGCGTTTTCGGAACGAAGAGTTTCCTGATTTT ATAATTAATTGGTTTTATCATAGATTCTGGCTAAGTAGTAAAGATAATGTGGAGTATATATGGAATGATATGATTCCCTA TTTAGTAGAAGGGTGGCGTTATAATAATAATTTTGTGATTGAACTTTTAAAAATTGCTGGTGAGTTTGATAAAGACTATG AATTTTTCCAACTTTTCAAAGCTGTTTTCATGGAAAGAAAAGATCCGTATTCTCTTGTGAAAAAATTGGTAGAGAAATCA GATAAGACTACAAAAAAAGACGAATGGGTAGCGATCGTACTGCTTATATATTGTGATTTTCTATACGAAGAAAAGAAGTA TTCAGAAGTTTTAAAAAGATGGGAACAAGCTCAAATATTTATACCTGAAGAAGCAGAAGATCTAAGAAGGTCATTTGAAA AATTACGGAGTCTATCATTTAAGCAAGAGAAGAAAAATGATTTTAAAGAAGATCAAATAGAAACAGAATCTAGTCCACCA ATAGACCTCTCCAAAAATATAGATTTGGGAAAGGTGAGCTCTGATATATTATCTAGATTAGAGAAGTTAGAGAATCAGCG TAATACATTTTCTCAACAAGCAACTCAAAAGGAAGAAAAAACAGAGTTGCAGCTAAAGCAAAATTATCATCCAAATGAAG AAAAAATAGAAGAAGATAAAGAACAAAAATTTAACTCGCAGACATGGTCAGAAAAACAAGCAAATATTCCTAAGAAAGAA AAAACAGAGTCGCAGCTAAAGCAAAATTATCATCCAAATGAAGAAAAAATAGAAGAAGATAAAGAACAAAAATTTAACTC GCAGACATGGTCAGAAAAACAAGCAAATATTCTTAAGTCTGATAATGAAAAACTAATATATCAATTAAAATTTTGGCATT TGATAGTGCTAATATTCCCGTTATATATTATTATTTTAGTATTTTTCTTTTTAGTATATTTAATATATGAACAGAATAAT ATGCCGGAGAAAATTCAGATTAGAAATGAACAGAATAATATGCCGGAGAAAATTCAGGCTAGAAATGAACAGAATAATAT GCCGGAGAAAATTCAGCCTAAAAATGAACAGGAATATAAAAAATTAAATGAACAAGAAAATGAAAATTTGATTGAGTCAG CTATTTTTTTTGCTAAGAATAATAGAGTTGATAAAGGATTGGAAAATCTATGCGAAATACCTAGAAATTCTAATTCATTT AGGGAGGCTAAACAGTGGATAAATAGATGGTCAAAAGATGATTACTGGGGTCCGCAATTACCTTCAATTATTGAAAAATT TCAAGAAGAAGGATTATCATGTCCTGCTGCAGAAGACGCAGACCTAAGAAGGTATTAA
Upstream 100 bases:
>100_bases AATACGGCGCAAAATTCAGGAAGAAAAAAAGGATTTTAAGAATATTTTTCATGGGTTAGTTGTTCTCAACCGTTTAAAAA ATGATGAAATTAAAACATAC
Downstream 100 bases:
>100_bases CTTAATCGGATAAAAACGATTTAATATGAAAAAAAAGCATTCTATTAGTCATAGATAAAATTCATGTCTTTGACACACCA ATGACTAAAGTTGCGTAAAT
Product: heat domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 925; Mature: 925
Protein sequence:
>925_residues MKEINQKKLNNSLNGEKIDFDLLWNTIQVKKDLLELIRTPFLLYVLSSTLVSIYQQNPSSISQGIEAIYKAVSNLEKLLD KFVREQYKRESGKSKIPIPWSLNKVKRLLGQIAVLMMSDREPDDNEILPEHFNKVIQIQEDIKKFIDLTKNLYLLESEEK ANNQNPTSTYKFRHLTLRDYFAFDYGSNFFDQQEDNFNQKSEKFKLEIEPEQVVKAIGKIEKEQVVKLLTKLLDHPDPDV RYEAIKSLGELRTLVYVEGYNSDLKNQVVNYSLDEFDKSLIKEYFSEKKYFEINDNEAKKIYQYSGGNVWIIEQIATMFG VVSLDEILGVDDVPMPIAAKSPDEQILATTVQRLLHYCVNKEDKRAVYLLAIAYCPNPEFLKFMLGCENLDAKLQELHNN YPFILPEKQQLEEIHQKFTKQYLLSLRNENNFNKYESESQKIAKNLNRKAAHYFQDKIEDLTGKLTTAKQRFRNEEFPDF IINWFYHRFWLSSKDNVEYIWNDMIPYLVEGWRYNNNFVIELLKIAGEFDKDYEFFQLFKAVFMERKDPYSLVKKLVEKS DKTTKKDEWVAIVLLIYCDFLYEEKKYSEVLKRWEQAQIFIPEEAEDLRRSFEKLRSLSFKQEKKNDFKEDQIETESSPP IDLSKNIDLGKVSSDILSRLEKLENQRNTFSQQATQKEEKTELQLKQNYHPNEEKIEEDKEQKFNSQTWSEKQANIPKKE KTESQLKQNYHPNEEKIEEDKEQKFNSQTWSEKQANILKSDNEKLIYQLKFWHLIVLIFPLYIIILVFFFLVYLIYEQNN MPEKIQIRNEQNNMPEKIQARNEQNNMPEKIQPKNEQEYKKLNEQENENLIESAIFFAKNNRVDKGLENLCEIPRNSNSF REAKQWINRWSKDDYWGPQLPSIIEKFQEEGLSCPAAEDADLRRY
Sequences:
>Translated_925_residues MKEINQKKLNNSLNGEKIDFDLLWNTIQVKKDLLELIRTPFLLYVLSSTLVSIYQQNPSSISQGIEAIYKAVSNLEKLLD KFVREQYKRESGKSKIPIPWSLNKVKRLLGQIAVLMMSDREPDDNEILPEHFNKVIQIQEDIKKFIDLTKNLYLLESEEK ANNQNPTSTYKFRHLTLRDYFAFDYGSNFFDQQEDNFNQKSEKFKLEIEPEQVVKAIGKIEKEQVVKLLTKLLDHPDPDV RYEAIKSLGELRTLVYVEGYNSDLKNQVVNYSLDEFDKSLIKEYFSEKKYFEINDNEAKKIYQYSGGNVWIIEQIATMFG VVSLDEILGVDDVPMPIAAKSPDEQILATTVQRLLHYCVNKEDKRAVYLLAIAYCPNPEFLKFMLGCENLDAKLQELHNN YPFILPEKQQLEEIHQKFTKQYLLSLRNENNFNKYESESQKIAKNLNRKAAHYFQDKIEDLTGKLTTAKQRFRNEEFPDF IINWFYHRFWLSSKDNVEYIWNDMIPYLVEGWRYNNNFVIELLKIAGEFDKDYEFFQLFKAVFMERKDPYSLVKKLVEKS DKTTKKDEWVAIVLLIYCDFLYEEKKYSEVLKRWEQAQIFIPEEAEDLRRSFEKLRSLSFKQEKKNDFKEDQIETESSPP IDLSKNIDLGKVSSDILSRLEKLENQRNTFSQQATQKEEKTELQLKQNYHPNEEKIEEDKEQKFNSQTWSEKQANIPKKE KTESQLKQNYHPNEEKIEEDKEQKFNSQTWSEKQANILKSDNEKLIYQLKFWHLIVLIFPLYIIILVFFFLVYLIYEQNN MPEKIQIRNEQNNMPEKIQARNEQNNMPEKIQPKNEQEYKKLNEQENENLIESAIFFAKNNRVDKGLENLCEIPRNSNSF REAKQWINRWSKDDYWGPQLPSIIEKFQEEGLSCPAAEDADLRRY >Mature_925_residues MKEINQKKLNNSLNGEKIDFDLLWNTIQVKKDLLELIRTPFLLYVLSSTLVSIYQQNPSSISQGIEAIYKAVSNLEKLLD KFVREQYKRESGKSKIPIPWSLNKVKRLLGQIAVLMMSDREPDDNEILPEHFNKVIQIQEDIKKFIDLTKNLYLLESEEK ANNQNPTSTYKFRHLTLRDYFAFDYGSNFFDQQEDNFNQKSEKFKLEIEPEQVVKAIGKIEKEQVVKLLTKLLDHPDPDV RYEAIKSLGELRTLVYVEGYNSDLKNQVVNYSLDEFDKSLIKEYFSEKKYFEINDNEAKKIYQYSGGNVWIIEQIATMFG VVSLDEILGVDDVPMPIAAKSPDEQILATTVQRLLHYCVNKEDKRAVYLLAIAYCPNPEFLKFMLGCENLDAKLQELHNN YPFILPEKQQLEEIHQKFTKQYLLSLRNENNFNKYESESQKIAKNLNRKAAHYFQDKIEDLTGKLTTAKQRFRNEEFPDF IINWFYHRFWLSSKDNVEYIWNDMIPYLVEGWRYNNNFVIELLKIAGEFDKDYEFFQLFKAVFMERKDPYSLVKKLVEKS DKTTKKDEWVAIVLLIYCDFLYEEKKYSEVLKRWEQAQIFIPEEAEDLRRSFEKLRSLSFKQEKKNDFKEDQIETESSPP IDLSKNIDLGKVSSDILSRLEKLENQRNTFSQQATQKEEKTELQLKQNYHPNEEKIEEDKEQKFNSQTWSEKQANIPKKE KTESQLKQNYHPNEEKIEEDKEQKFNSQTWSEKQANILKSDNEKLIYQLKFWHLIVLIFPLYIIILVFFFLVYLIYEQNN MPEKIQIRNEQNNMPEKIQARNEQNNMPEKIQPKNEQEYKKLNEQENENLIESAIFFAKNNRVDKGLENLCEIPRNSNSF REAKQWINRWSKDDYWGPQLPSIIEKFQEEGLSCPAAEDADLRRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 110145; Mature: 110145
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS50077 HEAT_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEINQKKLNNSLNGEKIDFDLLWNTIQVKKDLLELIRTPFLLYVLSSTLVSIYQQNPSS CCCCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ISQGIEAIYKAVSNLEKLLDKFVREQYKRESGKSKIPIPWSLNKVKRLLGQIAVLMMSDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC EPDDNEILPEHFNKVIQIQEDIKKFIDLTKNLYLLESEEKANNQNPTSTYKFRHLTLRDY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHCCCCCCCCCEEEEEEEHHHH FAFDYGSNFFDQQEDNFNQKSEKFKLEIEPEQVVKAIGKIEKEQVVKLLTKLLDHPDPDV HHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH RYEAIKSLGELRTLVYVEGYNSDLKNQVVNYSLDEFDKSLIKEYFSEKKYFEINDNEAKK HHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCHHHH IYQYSGGNVWIIEQIATMFGVVSLDEILGVDDVPMPIAAKSPDEQILATTVQRLLHYCVN HHEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC KEDKRAVYLLAIAYCPNPEFLKFMLGCENLDAKLQELHNNYPFILPEKQQLEEIHQKFTK CCCCCEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHH QYLLSLRNENNFNKYESESQKIAKNLNRKAAHYFQDKIEDLTGKLTTAKQRFRNEEFPDF HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IINWFYHRFWLSSKDNVEYIWNDMIPYLVEGWRYNNNFVIELLKIAGEFDKDYEFFQLFK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH AVFMERKDPYSLVKKLVEKSDKTTKKDEWVAIVLLIYCDFLYEEKKYSEVLKRWEQAQIF HHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE IPEEAEDLRRSFEKLRSLSFKQEKKNDFKEDQIETESSPPIDLSKNIDLGKVSSDILSRL CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH EKLENQRNTFSQQATQKEEKTELQLKQNYHPNEEKIEEDKEQKFNSQTWSEKQANIPKKE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHH KTESQLKQNYHPNEEKIEEDKEQKFNSQTWSEKQANILKSDNEKLIYQLKFWHLIVLIFP HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LYIIILVFFFLVYLIYEQNNMPEKIQIRNEQNNMPEKIQARNEQNNMPEKIQPKNEQEYK HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHH KLNEQENENLIESAIFFAKNNRVDKGLENLCEIPRNSNSFREAKQWINRWSKDDYWGPQL HHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCH PSIIEKFQEEGLSCPAAEDADLRRY HHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKEINQKKLNNSLNGEKIDFDLLWNTIQVKKDLLELIRTPFLLYVLSSTLVSIYQQNPSS CCCCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ISQGIEAIYKAVSNLEKLLDKFVREQYKRESGKSKIPIPWSLNKVKRLLGQIAVLMMSDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC EPDDNEILPEHFNKVIQIQEDIKKFIDLTKNLYLLESEEKANNQNPTSTYKFRHLTLRDY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHCCCCCCCCCEEEEEEEHHHH FAFDYGSNFFDQQEDNFNQKSEKFKLEIEPEQVVKAIGKIEKEQVVKLLTKLLDHPDPDV HHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH RYEAIKSLGELRTLVYVEGYNSDLKNQVVNYSLDEFDKSLIKEYFSEKKYFEINDNEAKK HHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCHHHH IYQYSGGNVWIIEQIATMFGVVSLDEILGVDDVPMPIAAKSPDEQILATTVQRLLHYCVN HHEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC KEDKRAVYLLAIAYCPNPEFLKFMLGCENLDAKLQELHNNYPFILPEKQQLEEIHQKFTK CCCCCEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHH QYLLSLRNENNFNKYESESQKIAKNLNRKAAHYFQDKIEDLTGKLTTAKQRFRNEEFPDF HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IINWFYHRFWLSSKDNVEYIWNDMIPYLVEGWRYNNNFVIELLKIAGEFDKDYEFFQLFK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH AVFMERKDPYSLVKKLVEKSDKTTKKDEWVAIVLLIYCDFLYEEKKYSEVLKRWEQAQIF HHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE IPEEAEDLRRSFEKLRSLSFKQEKKNDFKEDQIETESSPPIDLSKNIDLGKVSSDILSRL CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH EKLENQRNTFSQQATQKEEKTELQLKQNYHPNEEKIEEDKEQKFNSQTWSEKQANIPKKE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCHH KTESQLKQNYHPNEEKIEEDKEQKFNSQTWSEKQANILKSDNEKLIYQLKFWHLIVLIFP HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LYIIILVFFFLVYLIYEQNNMPEKIQIRNEQNNMPEKIQARNEQNNMPEKIQPKNEQEYK HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHH KLNEQENENLIESAIFFAKNNRVDKGLENLCEIPRNSNSFREAKQWINRWSKDDYWGPQL HHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCH PSIIEKFQEEGLSCPAAEDADLRRY HHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA