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The map label for this gene is atpC

Identifier: 110835586

GI number: 110835586

Start: 3082861

End: 3083280

Strand: Reverse

Name: atpC

Synonym: ABO_2725

Alternate gene names: 110835586

Gene position: 3083280-3082861 (Counterclockwise)

Preceding gene: 110835587

Following gene: 110835585

Centisome position: 98.82

GC content: 55.24

Gene sequence:

>420_bases
ATGGCGATGACCGTGCATTGCGACATTGTAAGTGCAGAACGCCAGCTGTTCTCCGGCTTGGTTGAAATTGTGGTAGCTTC
CGGTGTGGAAGGTGACCTCGGTATCATGCCCGGCCACGCCCCGCTGCTGACCCGGCTGAAGCCGGGCCCGGTACGGGTGA
AGAAGCAGAATGGTGAAGAAGAAGTGTTCTACGTATCCGGTGGCTTCTTAGAAGTGCAGCCGAAGCTGGTGACCGTACTG
GCAGATACGGCTGAACGCGCTGAAAATATGGACGCTGCAGAAGCTGAGCGTGCTAAAGCCCGTGCCAAAGAAGCGTTGGA
AGGCAAGAGTTCCGAAATGGATTACTCCCGTGCCGCTGCAACTCTGATAGAGGCCGTTGCACAGCTGCGTGCCATTCAAC
AATTGAAGAATAAGCGGTAA

Upstream 100 bases:

>100_bases
CACATCCCGGAGCAGGACTTCTACATGAAGGGCTCTATCGACGAAGTGATTGAAGCCTACAACAAGCGTAGCAAGTAACC
TGCACCTGGGAGACAAGCAA

Downstream 100 bases:

>100_bases
GTATCTTTTGCAATTCTTCAACACAGGAAAGGGTAGCCAAGTGCTACCCTTTTTTGTTTCTGTCGTATAGTGAGCGCCCG
GTTGGAATAGGTCCTGTGCG

Product: ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MAMTVHCDIVSAERQLFSGLVEIVVASGVEGDLGIMPGHAPLLTRLKPGPVRVKKQNGEEEVFYVSGGFLEVQPKLVTVL
ADTAERAENMDAAEAERAKARAKEALEGKSSEMDYSRAAATLIEAVAQLRAIQQLKNKR

Sequences:

>Translated_139_residues
MAMTVHCDIVSAERQLFSGLVEIVVASGVEGDLGIMPGHAPLLTRLKPGPVRVKKQNGEEEVFYVSGGFLEVQPKLVTVL
ADTAERAENMDAAEAERAKARAKEALEGKSSEMDYSRAAATLIEAVAQLRAIQQLKNKR
>Mature_138_residues
AMTVHCDIVSAERQLFSGLVEIVVASGVEGDLGIMPGHAPLLTRLKPGPVRVKKQNGEEEVFYVSGGFLEVQPKLVTVLA
DTAERAENMDAAEAERAKARAKEALEGKSSEMDYSRAAATLIEAVAQLRAIQQLKNKR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=137, Percent_Identity=56.2043795620438, Blast_Score=159, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_ALCBS (Q0VKX5)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_694445.1
- ProteinModelPortal:   Q0VKX5
- SMR:   Q0VKX5
- STRING:   Q0VKX5
- GeneID:   4213844
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2725
- NMPDR:   fig|393595.12.peg.2734
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   MAMTVHC
- PhylomeDB:   Q0VKX5
- BioCyc:   ABOR393595:ABO_2725-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15019; Mature: 14888

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS00287 CYSTATIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMTVHCDIVSAERQLFSGLVEIVVASGVEGDLGIMPGHAPLLTRLKPGPVRVKKQNGEE
CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCC
EVFYVSGGFLEVQPKLVTVLADTAERAENMDAAEAERAKARAKEALEGKSSEMDYSRAAA
EEEEEECCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
TLIEAVAQLRAIQQLKNKR
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AMTVHCDIVSAERQLFSGLVEIVVASGVEGDLGIMPGHAPLLTRLKPGPVRVKKQNGEE
EEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCC
EVFYVSGGFLEVQPKLVTVLADTAERAENMDAAEAERAKARAKEALEGKSSEMDYSRAAA
EEEEEECCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
TLIEAVAQLRAIQQLKNKR
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA