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The map label for this gene is ureD

Identifier: 110835583

GI number: 110835583

Start: 3078351

End: 3079235

Strand: Reverse

Name: ureD

Synonym: ABO_2722

Alternate gene names: 110835583

Gene position: 3079235-3078351 (Counterclockwise)

Preceding gene: 110835584

Following gene: 110835582

Centisome position: 98.69

GC content: 55.48

Gene sequence:

>885_bases
GTGAGCGTAGAGAAACCGGTAGCAGCGGGCCGGCAGAACAGTAAGGCCACAGGCAGGCATAAGGGATGGCAAGCAAAACT
GCATATGCAGCTTGAGTGCGCCATAACTGGGCGCGGCATGAAAACCGTCATGGCCGAATTGCACCATTATGGACCGTTGC
GCGTTCAGCGCCCTTTCTACCCAGAGCAGGACACCGCACACATCTATTTACTGCACCCACCAGGGGGGGTTGTGGGTGGT
GATGGACTGGATATCAGCATTACCGCATCGAGCCAGGCCCATGGCTTACTCACTACCCCTGGGGCAACCAAGTTTTACCG
CAGCGCTGGGCAAACCGCCCATGTGAGCCAAACGCTCACCGTTCAGGCAGGAGGGACACTGGAATGGTTTCCCCAAGAAA
ATATTTTCTTCCCTGGGGCACGGGTACAGATGGACACCCGGATCGATCTGCACGGGGATGCCCATTTTATGGGCTGGGAA
ATTTCCTGCTTGGGTCGGCCGGTTAATAGTGAAGTGTTTCACGAGGGAAAAATCGACGCCCGTTTTCGTATTAGCCGCGA
CCGTAAACCGCTGCTGATTGAACGCCTTAAGGTGGATCAGCCCAGCCACCTCAATGCGGCCTCTGGGCTGCGTAATTTCC
CCATGCAGGCAATATTTGTAGCCACGGGGAGTAATGAGGAGTTGCTGGAGCAGGCCCGTGAATGCATTGAAAAGCAGGCC
ACCGACATGCCCTGCGGCCTCACCCTGATTGACGACATTCTGGTCATGCGTGTGCTCGGCACTCGCTGTGAAAAAATTCA
AGCATTGATGCTTCCCGTCTGGCAATTATTGCGTCAGGCCACCCTGAATAAACCGGCGGTGATACCGCGAATCTGGAACA
CCTGA

Upstream 100 bases:

>100_bases
TCAGCCCTTATAAGTGATAAGCCGCCCTCTATTTTAGCAGGTGGCACAAAAGCTGCATAAATTTGGTGCATGATAAAGAG
CAGGCAAAGGGGCCAGGCCA

Downstream 100 bases:

>100_bases
TAACGGTGTAAGGAAAGGCAAAAAGGTAAAGCATGGAACTGACACCCAGAGAAAAAGACAAGCTGTTGATTTTTACCGCC
GCGCTGCTGGCCGAACGGCG

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSVEKPVAAGRQNSKATGRHKGWQAKLHMQLECAITGRGMKTVMAELHHYGPLRVQRPFYPEQDTAHIYLLHPPGGVVGG
DGLDISITASSQAHGLLTTPGATKFYRSAGQTAHVSQTLTVQAGGTLEWFPQENIFFPGARVQMDTRIDLHGDAHFMGWE
ISCLGRPVNSEVFHEGKIDARFRISRDRKPLLIERLKVDQPSHLNAASGLRNFPMQAIFVATGSNEELLEQARECIEKQA
TDMPCGLTLIDDILVMRVLGTRCEKIQALMLPVWQLLRQATLNKPAVIPRIWNT

Sequences:

>Translated_294_residues
MSVEKPVAAGRQNSKATGRHKGWQAKLHMQLECAITGRGMKTVMAELHHYGPLRVQRPFYPEQDTAHIYLLHPPGGVVGG
DGLDISITASSQAHGLLTTPGATKFYRSAGQTAHVSQTLTVQAGGTLEWFPQENIFFPGARVQMDTRIDLHGDAHFMGWE
ISCLGRPVNSEVFHEGKIDARFRISRDRKPLLIERLKVDQPSHLNAASGLRNFPMQAIFVATGSNEELLEQARECIEKQA
TDMPCGLTLIDDILVMRVLGTRCEKIQALMLPVWQLLRQATLNKPAVIPRIWNT
>Mature_293_residues
SVEKPVAAGRQNSKATGRHKGWQAKLHMQLECAITGRGMKTVMAELHHYGPLRVQRPFYPEQDTAHIYLLHPPGGVVGGD
GLDISITASSQAHGLLTTPGATKFYRSAGQTAHVSQTLTVQAGGTLEWFPQENIFFPGARVQMDTRIDLHGDAHFMGWEI
SCLGRPVNSEVFHEGKIDARFRISRDRKPLLIERLKVDQPSHLNAASGLRNFPMQAIFVATGSNEELLEQARECIEKQAT
DMPCGLTLIDDILVMRVLGTRCEKIQALMLPVWQLLRQATLNKPAVIPRIWNT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_ALCBS (Q0VKX8)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_694442.1
- STRING:   Q0VKX8
- GeneID:   4211734
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2722
- NMPDR:   fig|393595.12.peg.2731
- eggNOG:   COG0829
- HOGENOM:   HBG711156
- OMA:   CLGRPVM
- BioCyc:   ABOR393595:ABO_2722-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 32673; Mature: 32542

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEKPVAAGRQNSKATGRHKGWQAKLHMQLECAITGRGMKTVMAELHHYGPLRVQRPFY
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCCEEEECCCC
PEQDTAHIYLLHPPGGVVGGDGLDISITASSQAHGLLTTPGATKFYRSAGQTAHVSQTLT
CCCCCEEEEEECCCCCEECCCCEEEEEEECCCCCEEEECCCHHHHHHHCCCEEECEEEEE
VQAGGTLEWFPQENIFFPGARVQMDTRIDLHGDAHFMGWEISCLGRPVNSEVFHEGKIDA
EEECCEEEECCCCCEECCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCHHHEECCCCCE
RFRISRDRKPLLIERLKVDQPSHLNAASGLRNFPMQAIFVATGSNEELLEQARECIEKQA
EEEECCCCCCHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHC
TDMPCGLTLIDDILVMRVLGTRCEKIQALMLPVWQLLRQATLNKPAVIPRIWNT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SVEKPVAAGRQNSKATGRHKGWQAKLHMQLECAITGRGMKTVMAELHHYGPLRVQRPFY
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCCEEEECCCC
PEQDTAHIYLLHPPGGVVGGDGLDISITASSQAHGLLTTPGATKFYRSAGQTAHVSQTLT
CCCCCEEEEEECCCCCEECCCCEEEEEEECCCCCEEEECCCHHHHHHHCCCEEECEEEEE
VQAGGTLEWFPQENIFFPGARVQMDTRIDLHGDAHFMGWEISCLGRPVNSEVFHEGKIDA
EEECCEEEECCCCCEECCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCHHHEECCCCCE
RFRISRDRKPLLIERLKVDQPSHLNAASGLRNFPMQAIFVATGSNEELLEQARECIEKQA
EEEECCCCCCHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHC
TDMPCGLTLIDDILVMRVLGTRCEKIQALMLPVWQLLRQATLNKPAVIPRIWNT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA